Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- plasma membrane 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6B01G258600.1 | Wheat | cytosol, peroxisome, plasma membrane | 97.61 | 97.61 |
HORVU6Hr1G058840.1 | Barley | cytosol, peroxisome, plasma membrane | 97.05 | 97.05 |
TraesCS6A01G222700.1 | Wheat | cytosol, peroxisome, plasma membrane | 97.05 | 97.05 |
Os05t0427400-00 | Rice | cytosol, peroxisome, plastid | 89.33 | 88.83 |
TraesCS2D01G204400.1 | Wheat | peroxisome | 82.16 | 87.57 |
TraesCS1D01G039300.1 | Wheat | mitochondrion | 64.47 | 87.1 |
TraesCS2D01G377200.1 | Wheat | cytosol, peroxisome, plastid | 86.8 | 86.68 |
TraesCS2D01G377400.1 | Wheat | cytosol, peroxisome, plastid | 86.52 | 86.4 |
TraesCS2D01G377500.1 | Wheat | cytosol, peroxisome, plastid | 86.38 | 86.26 |
TraesCS2D01G377600.1 | Wheat | plastid | 85.81 | 86.18 |
TraesCS1D01G103500.1 | Wheat | cytosol, peroxisome, plastid | 85.67 | 86.16 |
TraesCS2D01G218700.1 | Wheat | peroxisome | 85.53 | 86.14 |
TraesCS2D01G204700.1 | Wheat | peroxisome | 85.53 | 86.14 |
TraesCS1D01G039400.1 | Wheat | golgi | 85.11 | 85.71 |
TraesCS1D01G039500.1 | Wheat | cytosol, peroxisome, plastid | 85.67 | 85.43 |
TraesCS6D01G212400.1 | Wheat | cytosol, peroxisome, plastid | 84.69 | 84.45 |
Solyc03g036480.1.1 | Tomato | peroxisome | 11.52 | 80.39 |
Solyc03g036470.1.1 | Tomato | mitochondrion | 25.14 | 78.17 |
CDY18464 | Canola | peroxisome | 45.37 | 76.36 |
PGSC0003DMT400080765 | Potato | peroxisome | 46.63 | 76.32 |
Solyc03g042560.1.1 | Tomato | peroxisome | 49.44 | 75.54 |
CDX78161 | Canola | cytosol | 52.39 | 75.2 |
CDX73567 | Canola | cytosol | 52.39 | 75.2 |
CDX67566 | Canola | cytosol | 51.83 | 75.15 |
KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 72.05 | 74.67 |
CDY66761 | Canola | cytosol, peroxisome, plastid | 54.35 | 74.57 |
Solyc10g086180.1.1 | Tomato | extracellular | 74.16 | 74.26 |
PGSC0003DMT400055489 | Potato | mitochondrion | 40.73 | 74.17 |
TraesCS6D01G212200.1 | Wheat | extracellular, golgi, unclear | 73.17 | 74.01 |
PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 73.74 | 73.84 |
CDX76219 | Canola | cytosol | 54.07 | 73.75 |
KRG91925 | Soybean | cytosol, peroxisome, plastid | 73.88 | 73.36 |
PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 74.3 | 73.27 |
AT3G10340.1 | Thale cress | peroxisome | 72.75 | 73.27 |
CDY00922 | Canola | cytosol | 72.61 | 73.23 |
Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 74.02 | 73.09 |
Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 74.02 | 73.09 |
Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 74.02 | 73.09 |
Bra029831.1-P | Field mustard | cytosol | 72.47 | 73.09 |
PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 73.6 | 72.88 |
Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 73.74 | 72.71 |
CDY08611 | Canola | cytosol | 72.05 | 72.66 |
Bra003126.1-P | Field mustard | cytosol | 72.05 | 72.56 |
PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 70.08 | 72.42 |
AT3G53260.1 | Thale cress | cytosol | 72.75 | 72.25 |
Bra006985.1-P | Field mustard | cytosol | 71.21 | 71.81 |
AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 72.89 | 71.59 |
Solyc09g007890.1.1 | Tomato | plastid | 72.05 | 71.35 |
Bra039777.1-P | Field mustard | peroxisome | 50.98 | 71.18 |
Solyc03g078280.1.1 | Tomato | peroxisome | 25.56 | 70.54 |
TraesCS3D01G016300.1 | Wheat | peroxisome | 67.42 | 69.67 |
Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 35.67 | 69.59 |
TraesCS3D01G016500.1 | Wheat | peroxisome | 66.43 | 68.65 |
CDX99621 | Canola | mitochondrion | 52.53 | 68.37 |
Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 13.9 | 68.28 |
AT5G04230.2 | Thale cress | peroxisome | 66.85 | 68.19 |
Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 64.61 | 65.9 |
CDY15917 | Canola | cytosol, peroxisome, plastid | 64.47 | 65.76 |
CDY13306 | Canola | peroxisome | 19.24 | 65.24 |
Bra005221.1-P | Field mustard | peroxisome | 33.43 | 64.15 |
CDY18463 | Canola | peroxisome | 23.6 | 63.88 |
CDX91331 | Canola | peroxisome | 33.29 | 62.37 |
CDX74991 | Canola | peroxisome | 33.29 | 62.37 |
PGSC0003DMT400055529 | Potato | cytosol | 14.19 | 60.48 |
Solyc03g071870.1.1 | Tomato | peroxisome | 14.33 | 59.3 |
VIT_11s0016g01640.t01 | Wine grape | peroxisome | 54.78 | 58.65 |
Solyc10g011930.1.1 | Tomato | cytosol | 10.25 | 57.48 |
GSMUA_Achr9P15990_001 | Banana | peroxisome | 55.9 | 56.61 |
Solyc10g011920.1.1 | Tomato | cytosol | 9.97 | 55.91 |
CDY61769 | Canola | peroxisome | 18.68 | 52.57 |
Bra028793.1-P | Field mustard | peroxisome | 21.49 | 52.04 |
VIT_11s0016g01660.t01 | Wine grape | peroxisome | 12.5 | 51.15 |
VIT_11s0016g01520.t01 | Wine grape | peroxisome | 62.64 | 49.83 |
VIT_11s0016g01510.t01 | Wine grape | peroxisome | 14.04 | 28.17 |
Protein Annotations
KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF31 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | EnsemblPlantsGene:TraesCS6D01G212500 | EnsemblPlants:TraesCS6D01G212500.1 | TIGR:cd00332 | SEG:seg |
Description
No Description!
Coordinates
chr6D:-:300896700..300899169
Molecular Weight (calculated)
76762.3 Da
IEP (calculated)
5.953
GRAVY (calculated)
-0.032
Length
712 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYENGEVAA NGNSVCMAIQ HADPLNWGKA AEELTGSHLD EVKRMVADYR KPVVTIEGAS LSIAKVAAVA AAGEVVVELD ESARARVKAS SDWVMNSMMN
101: GTDSYGVTTG FGATSHRRTK QGGALQRELI RFLNAGAFGT GSDAHVLPAA TTRAAMLVRI NTLLQGYSGI RFEILEAVAK LLNANVMPCL PLRGTITASG
201: DLVPLSYIAG LITGRENSVA IGPDGTKVNA AEAFKIAGIH GGFFELQPKE GLAMVNGTAV GSALASTVLF EANILALLAE VISAVFCEVM NGKPEFTDHH
301: THKLKHHPGQ IEAAAIMEHI LEGSSYMKLA KKLGDLDPLM KPKQDRYALR TSPQWLGPQI EVIRAATKSI EREINSVNDN PLIDVSRGKA IHGGNFQGTP
401: IGVSMDNTRL AIAAIGKLMF AQFSELVNDL YNNGLPSNLS GGHNPSLDYG FKGAEIAMAS YCSELQFLGN PVTNHVQSAE QHNQDVNSLG LISFRKTAEA
501: IEILKLMSST FLVALCQAID LRHIEENVKS AVKSCVLTVA KKTLSTNSTS GLHVARFCEK DLLQEIEREA VFAYADDPCS PNYPLMKKLR GVLVERALSN
601: GMAEFDAETS VFAKVALFEE ELRKTLPPAI EAARAAVESG TAEMPNRITE CCSYPLYRFV REELGTVYLT GEKTLSPGEE LNKVFVAMNQ GKHIDALLEC
701: LKEWNGEPLP IC
101: GTDSYGVTTG FGATSHRRTK QGGALQRELI RFLNAGAFGT GSDAHVLPAA TTRAAMLVRI NTLLQGYSGI RFEILEAVAK LLNANVMPCL PLRGTITASG
201: DLVPLSYIAG LITGRENSVA IGPDGTKVNA AEAFKIAGIH GGFFELQPKE GLAMVNGTAV GSALASTVLF EANILALLAE VISAVFCEVM NGKPEFTDHH
301: THKLKHHPGQ IEAAAIMEHI LEGSSYMKLA KKLGDLDPLM KPKQDRYALR TSPQWLGPQI EVIRAATKSI EREINSVNDN PLIDVSRGKA IHGGNFQGTP
401: IGVSMDNTRL AIAAIGKLMF AQFSELVNDL YNNGLPSNLS GGHNPSLDYG FKGAEIAMAS YCSELQFLGN PVTNHVQSAE QHNQDVNSLG LISFRKTAEA
501: IEILKLMSST FLVALCQAID LRHIEENVKS AVKSCVLTVA KKTLSTNSTS GLHVARFCEK DLLQEIEREA VFAYADDPCS PNYPLMKKLR GVLVERALSN
601: GMAEFDAETS VFAKVALFEE ELRKTLPPAI EAARAAVESG TAEMPNRITE CCSYPLYRFV REELGTVYLT GEKTLSPGEE LNKVFVAMNQ GKHIDALLEC
701: LKEWNGEPLP IC
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.