Factsheet for VIT_11s0016g01660.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
plastid 3
peroxisome 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_09s0002g04930.t01
VIT_09s0002g05010.t01
VIT_09s0002g05080.t01
VIT_09s0002g05210.t01
VIT_09s0002g08860.t01
VIT_09s0002g08870.t01
VIT_09s0002g08880.t01
VIT_11s0016g01510.t01
VIT_11s0016g01520.t01
VIT_11s0016g01640.t01
VIT_11s0016g01660.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37040.1	VIT_11s0016g01510.t01	AT2G37040.1	21798944
AT2G37040.1	VIT_11s0016g01520.t01	AT2G37040.1	21798944
AT2G37040.1	VIT_11s0016g01640.t01	AT2G37040.1	21798944
AT2G37040.1	VIT_11s0016g01660.t01	AT2G37040.1	21798944
AT2G37040.1	VIT_11s0016g01510.t01	AT3G10340.1	21798944
AT2G37040.1	VIT_11s0016g01520.t01	AT3G10340.1	21798944
AT2G37040.1	VIT_11s0016g01640.t01	AT3G10340.1	21798944
AT2G37040.1	VIT_11s0016g01660.t01	AT3G10340.1	21798944
AT3G10340.1	VIT_09s0002g04930.t01	AT1G15670.1	21798944
AT3G10340.1	VIT_09s0002g05010.t01	AT1G15670.1	21798944
AT3G10340.1	VIT_09s0002g05080.t01	AT1G15670.1	21798944
AT3G10340.1	VIT_09s0002g05210.t01	AT1G15670.1	21798944
AT3G10340.1	VIT_09s0002g08860.t01	AT1G15670.1	21798944
AT3G10340.1	VIT_09s0002g08870.t01	AT1G15670.1	21798944
AT3G10340.1	VIT_09s0002g08880.t01	AT1G15670.1	21798944
AT3G53260.1	VIT_11s0016g01510.t01	AT3G10340.1	21798944
AT3G53260.1	VIT_11s0016g01520.t01	AT3G10340.1	21798944
AT3G53260.1	VIT_11s0016g01640.t01	AT3G10340.1	21798944
AT3G53260.1	VIT_11s0016g01660.t01	AT3G10340.1	21798944
AT3G53260.1	VIT_11s0016g01510.t01	AT3G53260.1	21798944
AT3G53260.1	VIT_11s0016g01520.t01	AT3G53260.1	21798944
AT3G53260.1	VIT_11s0016g01640.t01	AT3G53260.1	21798944
AT3G53260.1	VIT_11s0016g01660.t01	AT3G53260.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s2849g00010.t01	Wine grape	peroxisome	52.87	29.87
VIT_11s0016g01640.t01	Wine grape	peroxisome	93.1	24.36
TraesCS2B01G398300.2	Wheat	peroxisome	48.85	23.1
Bra005221.1-P	Field mustard	peroxisome	48.28	22.64
CDX74991	Canola	peroxisome	47.7	21.84
CDX91331	Canola	peroxisome	47.7	21.84
CDY18464	Canola	peroxisome	52.3	21.51
TraesCS2A01G212600.1	Wheat	cytosol	31.61	20.75
VIT_11s0016g01520.t01	Wine grape	peroxisome	94.25	18.32
GSMUA_Achr9P15990_001	Banana	peroxisome	67.82	16.79
TraesCS3B01G027800.1	Wheat	mitochondrion	44.25	14.15
CDX99621	Canola	mitochondrion	43.1	13.71
Bra006985.1-P	Field mustard	cytosol	54.02	13.31
Os08t0308300-00	Rice	plastid	14.37	13.3
TraesCS2D01G204400.1	Wheat	peroxisome	50.57	13.17
VIT_16s0039g01110.t01	Wine grape	cytosol, peroxisome, plastid	53.45	13.1
VIT_16s0039g01120.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	53.45	13.1
TraesCS1D01G039300.1	Wheat	mitochondrion	39.66	13.09
Bra003126.1-P	Field mustard	cytosol	52.87	13.01
AT3G53260.1	Thale cress	cytosol	53.45	12.97
AT2G37040.1	Thale cress	cytosol, peroxisome, plastid	54.02	12.97
VIT_16s0039g01100.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	52.87	12.96
VIT_16s0039g01170.t01	Wine grape	cytosol, peroxisome, plastid	52.87	12.96
VIT_16s0039g01240.t01	Wine grape	cytosol, peroxisome, plastid	52.87	12.96
VIT_16s0039g01280.t01	Wine grape	cytosol, peroxisome, plastid	52.87	12.96
VIT_16s0039g01360.t01	Wine grape	cytosol, peroxisome, plastid	52.87	12.96
TraesCS2A01G196400.1	Wheat	mitochondrion, plastid	49.43	12.87
Os04t0518100-01	Rice	plasma membrane	52.3	12.87
VIT_06s0004g02620.t01	Wine grape	cytosol, peroxisome, plastid	52.87	12.83
VIT_16s0039g01130.t01	Wine grape	cytosol, peroxisome, plastid	52.3	12.82
EES05455	Sorghum	cytosol, peroxisome, plastid	52.3	12.75
EES07176	Sorghum	cytosol, peroxisome, plastid	52.3	12.75
EES07177	Sorghum	cytosol, peroxisome, plastid	52.3	12.75
Zm00001d051166_P001	Maize	extracellular	52.3	12.71
VIT_08s0040g01710.t01	Wine grape	cytosol, peroxisome, plastid	51.72	12.68
EES12521	Sorghum	cytosol	51.15	12.66
Zm00001d017276_P001	Maize	peroxisome	51.15	12.64
CDY00922	Canola	cytosol	51.15	12.61
Bra017210.1-P	Field mustard	cytosol, peroxisome, plastid	52.3	12.6
VIT_16s0039g01300.t01	Wine grape	vacuole	52.87	12.53
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	51.15	12.5
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	51.15	12.5
TraesCS6D01G212500.1	Wheat	peroxisome	51.15	12.5
Os02t0626600-00	Rice	plasma membrane	51.15	12.45
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	51.15	12.45
AT3G10340.1	Thale cress	peroxisome	50.57	12.45
Os02t0626100-01	Rice	extracellular, plasma membrane	50.0	12.41
TraesCS6A01G222700.1	Wheat	cytosol, peroxisome, plasma membrane	50.57	12.36
TraesCS6A01G222900.1	Wheat	extracellular, golgi, unclear	50.0	12.36
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	50.0	12.36
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	50.0	12.36
Bra029831.1-P	Field mustard	cytosol	50.0	12.32
Zm00001d003015_P001	Maize	peroxisome	50.57	12.31
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	50.0	12.31
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	50.0	12.31
TraesCS2A01G212900.1	Wheat	cytosol, peroxisome, plastid	50.0	12.31
TraesCS2D01G204700.1	Wheat	peroxisome	50.0	12.31
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	50.0	12.29
HORVU6Hr1G058820.2	Barley	mitochondrion	50.0	12.27
CDY08611	Canola	cytosol	49.43	12.18
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	49.43	12.18
TraesCS2B01G224000.1	Wheat	peroxisome	49.43	12.16
TraesCS2D01G218700.1	Wheat	peroxisome	49.43	12.16
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	49.43	12.15
Os02t0627100-01	Rice	plasma membrane	49.43	12.06
TraesCS2B01G398000.2	Wheat	plastid	49.43	12.06
OQU81984	Sorghum	peroxisome	49.43	12.04
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	50.0	12.03
TraesCS2A01G196700.1	Wheat	peroxisome	48.85	12.02
TraesCS2D01G377600.1	Wheat	plastid	48.85	11.99
TraesCS2A01G380800.1	Wheat	cytosol, peroxisome, plastid	48.85	11.92
TraesCS2A01G381000.1	Wheat	plastid	48.85	11.92
TraesCS2A01G381100.1	Wheat	plastid	48.85	11.92
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	48.85	11.92
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	48.85	11.92
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	48.85	11.92
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	48.85	11.92
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	48.85	11.92
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	48.85	11.9
VIT_13s0019g04460.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	49.43	11.89
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	48.28	11.88
TraesCS1D01G039400.1	Wheat	golgi	48.28	11.88
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	48.85	11.87
Zm00001d051163_P002	Maize	peroxisome	48.85	11.84
Zm00001d051161_P003	Maize	plastid	47.7	11.81
TraesCS2A01G380900.1	Wheat	cytosol, peroxisome, plastid	48.28	11.78
TraesCS4A01G401300.1	Wheat	cytosol, peroxisome, plastid	48.28	11.78
Os04t0518400-01	Rice	extracellular, plasma membrane	48.28	11.76
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	48.28	11.76
TraesCS1A01G037700.1	Wheat	cytosol, peroxisome, plastid	47.7	11.74
Zm00001d017274_P001	Maize	plasma membrane	47.13	11.66
EES07174	Sorghum	cytosol, peroxisome, plastid	47.13	11.65
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	47.7	11.64
TraesCS1A01G037800.1	Wheat	cytosol, peroxisome, plastid	47.7	11.62
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	47.7	11.62
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	47.7	11.62
TraesCS6A01G222800.1	Wheat	cytosol, peroxisome, plastid	47.7	11.62
TraesCS6B01G258500.1	Wheat	extracellular, unclear	47.7	11.62
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	47.7	11.62
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	47.7	11.61
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	47.13	11.6
Os02t0626400-01	Rice	mitochondrion, plasma membrane	47.7	11.56
Zm00001d017275_P001	Maize	extracellular	47.7	11.54
Zm00001d003016_P001	Maize	plastid	51.72	11.41
TraesCS3B01G053900.1	Wheat	peroxisome	44.83	11.32
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	44.83	11.3
EES07175	Sorghum	cytosol, peroxisome, plastid	45.98	11.14
HORVU2Hr1G089440.9	Barley	plasma membrane	48.85	11.08
AT5G04230.2	Thale cress	peroxisome	44.25	11.03
TraesCS3A01G029200.1	Wheat	peroxisome	43.68	11.03
TraesCS3D01G016300.1	Wheat	peroxisome	43.1	10.89
TraesCSU01G030700.1	Wheat	peroxisome	41.95	10.75
Bra030322.1-P	Field mustard	cytosol, peroxisome, plastid	41.95	10.46
CDY15917	Canola	cytosol, peroxisome, plastid	41.95	10.46
Zm00001d033286_P001	Maize	peroxisome	41.95	10.46
TraesCS2B01G020100.1	Wheat	peroxisome	40.8	10.43
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	31.03	10.38
Os12t0461300-00	Rice	plastid	14.94	10.28
TraesCS3D01G016500.1	Wheat	peroxisome	40.23	10.16
EER93773	Sorghum	peroxisome	40.8	10.01
Os12t0520200-01	Rice	plasma membrane	39.08	10.0
Bra028793.1-P	Field mustard	peroxisome	12.64	7.48
HORVU2Hr1G062750.1	Barley	mitochondrion	5.75	5.43
TraesCS5B01G468400.1	Wheat	peroxisome	17.24	5.43
CDY61769	Canola	peroxisome	5.17	3.56
TraesCS1A01G094900.1	Wheat	cytosol, peroxisome, plastid	8.05	2.81
VIT_11s0016g01510.t01	Wine grape	peroxisome	5.17	2.54
Zm00001d051164_P001	Maize	peroxisome	1.15	1.27
HORVU2Hr1G089540.1	Barley	peroxisome	1.72	0.64
Zm00001d029015_P001	Maize	peroxisome	1.15	0.5
VIT_00s2508g00010.t01	Wine grape	cytosol, peroxisome, plastid	1.15	0.43
CDX67566	Canola	cytosol	1.15	0.41
CDX73567	Canola	cytosol	1.15	0.4
CDX78161	Canola	cytosol	1.15	0.4
Bra039777.1-P	Field mustard	peroxisome	1.15	0.39
CDY66761	Canola	cytosol, peroxisome, plastid	1.15	0.39
CDX76219	Canola	cytosol	1.15	0.38
CDY18463	Canola	peroxisome	0.57	0.38
CDY13306	Canola	peroxisome	0.0	0.0
VIT_16s0039g01320.t01	Wine grape	peroxisome	0.0	0.0
Zm00001d020933_P001	Maize	mitochondrion	0.0	0.0
Zm00001d027249_P001	Maize	peroxisome	0.0	0.0
Zm00001d053619_P001	Maize	mitochondrion	0.0	0.0

Protein Annotations

ArrayExpress:VIT_11s0016g01660	EMBL:FN595756	EnsemblPlants:VIT_11s0016g01660.t01	EnsemblPlantsGene:VIT_11s0016g01660	Gene3D:1.10.274.20	GO:GO:0003674
GO:GO:0003824	InterPro:Aromatic_Lyase	InterPro:IPR023144	InterPro:L-Aspartase-like	InterPro:Phe_NH3-lyase_shielding_dom_sf	KEGG:00360+4.3.1.24
KEGG:00940+4.3.1.24	PANTHER:PTHR10362	PANTHER:PTHR10362:SF32	PFAM:PF00221	ProteinID:CBI27858	ProteinID:CBI27858.3
SEG:seg	SUPFAM:SSF48557	UniParc:UPI0001BE345E	UniProt:D7TCK0	MapMan:50.4.3	:

Description

No Description!

Coordinates

chr11:+:1327977..1330009

Molecular Weight (calculated)

20026.3 Da

IEP (calculated)

5.874

GRAVY (calculated)

-0.274

Length

174 amino acids

Sequence
(BLAST)

001: MTNVNSLGLI SARTSAEAVE ILKLMSATYM VALCQAVDLR HLEENMREVV KHLITQVARK KLYTDEDGTL LESRFCEKEL LQVVENLPVF SYLDDPTNPS
101: YSFLPQLRDV LVERALKDPK STDSAGYSIF KRIPIFLEEL EEKLIEKISK ARERFDNGDF PIPNRIKKCR TYPI

Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)

001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC

Arabidopsis Description

PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.