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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • peroxisome 2
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:mitochondrion, peroxisome
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003015_P001
Zm00001d003016_P001
Zm00001d017274_P001
Zm00001d017275_P001
Zm00001d017276_P001
Zm00001d017279_P001
Zm00001d020933_P001
Zm00001d027249_P001
Zm00001d029015_P001
Zm00001d033286_P001
Zm00001d036925_P001
Zm00001d051161_P003
Zm00001d051163_P002
Zm00001d051164_P001
Zm00001d051166_P001
Zm00001d053619_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 Zm00001d003015_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d003016_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d017274_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d017275_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d017276_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d017279_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d020933_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d027249_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d029015_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d033286_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d051161_P003 AT2G37040.1 21798944
AT2G37040.1 Zm00001d051163_P002 AT2G37040.1 21798944
AT2G37040.1 Zm00001d051164_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d051166_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d053619_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d003015_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d003016_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d017274_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d017275_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d017276_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d017279_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d020933_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d027249_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d029015_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d033286_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d051161_P003 AT3G10340.1 21798944
AT2G37040.1 Zm00001d051163_P002 AT3G10340.1 21798944
AT2G37040.1 Zm00001d051164_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d051166_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d053619_P001 AT3G10340.1 21798944
AT3G10340.1 Zm00001d036925_P001 AT1G15670.1 21798944
AT3G53260.1 Zm00001d003015_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d003016_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d017274_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d017275_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d017276_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d017279_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d020933_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d027249_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d029015_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d033286_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d051161_P003 AT3G10340.1 21798944
AT3G53260.1 Zm00001d051163_P002 AT3G10340.1 21798944
AT3G53260.1 Zm00001d051164_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d051166_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d053619_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d003015_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d003016_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d017274_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d017275_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d017276_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d017279_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d020933_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d027249_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d029015_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d033286_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d051161_P003 AT3G53260.1 21798944
AT3G53260.1 Zm00001d051163_P002 AT3G53260.1 21798944
AT3G53260.1 Zm00001d051164_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d051166_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d053619_P001 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g011930.1.1 Tomato cytosol 44.59 55.12
Solyc10g011920.1.1 Tomato cytosol 43.31 53.54
HORVU2Hr1G062750.1 Barley mitochondrion 57.32 48.91
Solyc03g071870.1.1 Tomato peroxisome 47.77 43.6
CDY13306 Canola peroxisome 50.96 38.1
Zm00001d027249_P001 Maize peroxisome 49.68 34.98
CDY18463 Canola peroxisome 54.14 32.32
Bra005221.1-P Field mustard peroxisome 52.87 22.37
CDX91331 Canola peroxisome 53.5 22.11
CDX74991 Canola peroxisome 53.5 22.11
CDY61769 Canola peroxisome 35.03 21.74
Zm00001d029015_P001 Maize peroxisome 51.59 20.35
VIT_11s0016g01510.t01 Wine grape peroxisome 45.86 20.28
Zm00001d053619_P001 Maize mitochondrion 53.5 19.86
Zm00001d051163_P002 Maize peroxisome 89.17 19.5
Bra028793.1-P Field mustard peroxisome 35.03 18.71
Zm00001d017275_P001 Maize extracellular 80.89 17.66
CDX78161 Canola cytosol 54.14 17.14
CDX73567 Canola cytosol 54.14 17.14
CDX67566 Canola cytosol 52.87 16.9
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 76.43 16.78
Bra039777.1-P Field mustard peroxisome 54.14 16.67
Zm00001d051166_P001 Maize extracellular 75.16 16.48
CDY66761 Canola cytosol, peroxisome, plastid 54.14 16.38
Zm00001d017276_P001 Maize peroxisome 72.61 16.19
CDX76219 Canola cytosol 53.5 16.09
Zm00001d003015_P001 Maize peroxisome 72.61 15.94
Zm00001d033286_P001 Maize peroxisome 61.15 13.75
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 59.87 13.02
Solyc09g007920.2.1 Tomato extracellular, nucleus 59.24 12.9
Solyc09g007910.2.1 Tomato extracellular, nucleus 59.24 12.9
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 59.24 12.9
KRG91925 Soybean cytosol, peroxisome, plastid 58.6 12.83
CDY00922 Canola cytosol 57.32 12.75
AT3G10340.1 Thale cress peroxisome 57.32 12.73
Solyc10g086180.1.1 Tomato extracellular 57.32 12.66
Bra029831.1-P Field mustard cytosol 56.69 12.61
CDY08611 Canola cytosol 56.69 12.61
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 56.69 12.52
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 57.32 12.52
Solyc09g007890.1.1 Tomato plastid 56.05 12.24
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 56.05 12.19
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 56.05 12.14
Zm00001d051161_P003 Maize plastid 54.14 12.09
Zm00001d017274_P001 Maize plasma membrane 54.14 12.09
Bra003126.1-P Field mustard cytosol 54.14 12.02
Bra006985.1-P Field mustard cytosol 53.5 11.9
AT3G53260.1 Thale cress cytosol 52.87 11.58
AT5G04230.2 Thale cress peroxisome 50.96 11.46
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 49.68 11.35
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 49.68 11.17
Zm00001d003016_P001 Maize plastid 56.05 11.15
CDY15917 Canola cytosol, peroxisome, plastid 49.04 11.03
VIT_11s0016g01640.t01 Wine grape peroxisome 46.5 10.98
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 45.86 10.45
Zm00001d020933_P001 Maize mitochondrion 10.83 8.06
VIT_11s0016g01520.t01 Wine grape peroxisome 45.22 7.93
GSMUA_Achr9P15990_001 Banana peroxisome 31.21 6.97
Solyc03g036470.1.1 Tomato mitochondrion 5.1 3.49
Solyc03g078270.1.1 Tomato endoplasmic reticulum 2.55 2.76
CDX99621 Canola mitochondrion 5.73 1.65
PGSC0003DMT400055529 Potato cytosol 1.27 1.2
VIT_11s0016g01660.t01 Wine grape peroxisome 1.27 1.15
Solyc03g078280.1.1 Tomato peroxisome 1.27 0.78
PGSC0003DMT400055489 Potato mitochondrion 1.91 0.77
PGSC0003DMT400080765 Potato peroxisome 1.91 0.69
Solyc03g042560.1.1 Tomato peroxisome 1.91 0.64
Solyc03g071860.2.1 Tomato endoplasmic reticulum 1.27 0.55
CDY18464 Canola peroxisome 1.27 0.47
Solyc03g036480.1.1 Tomato peroxisome 0.0 0.0
Protein Annotations
EnsemblPlants:Zm00001d051164_P001EnsemblPlants:Zm00001d051164_T001EnsemblPlantsGene:Zm00001d051164Gene3D:1.10.275.10GO:GO:0003674GO:GO:0003824
GO:GO:0016829InterPro:Aromatic_LyaseInterPro:Fumarase/histidase_NInterPro:IPR024083InterPro:L-Aspartase-likePANTHER:PTHR10362
PANTHER:PTHR10362:SF22PFAM:PF00221ProteinID:AQK53734.1SEG:segSUPFAM:SSF48557UniParc:UPI00084247E3
UniProt:A0A1D6Q5B7MapMan:35.1::::
Description
Phenylalanine ammonia-lyase 1
Coordinates
chr4:-:146803392..146803865
Molecular Weight (calculated)
16619.7 Da
IEP (calculated)
6.262
GRAVY (calculated)
-0.204
Length
157 amino acids
Sequence
(BLAST)
001: MESEAGLLVR SSLNGEGLCM PAPRADPLNW GKAAEGLSGS HLDEVKRMVA EFRDPLVKIQ GASLSVAQVA AVAVGAGGGE ARVELDESAR ERVRASSDWV
101: MGSMMNGTDS YGVTTGFGAT SHRRTKEGGA LQRELIRSDH SSVLTQPCSV WIVSFRS
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.