CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX67566
CDX69512
CDX73567
CDX76219
CDX78161
CDX85544
CDX90984
CDY00922
CDY08611
CDY13306
CDY26443
CDY66761

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G53260.1	CDY00922	AT3G10340.1	21798944
AT3G53260.1	CDY08611	AT3G10340.1	21798944
AT3G53260.1	CDX67566	AT3G53260.1	21798944
AT3G53260.1	CDX73567	AT3G53260.1	21798944
AT3G53260.1	CDX76219	AT3G53260.1	21798944
AT3G53260.1	CDX78161	AT3G53260.1	21798944
AT3G53260.1	CDY13306	AT3G53260.1	21798944
AT3G53260.1	CDY66761	AT3G53260.1	21798944
AT3G53260.1	CDX69512	AT5G15600.1	21798944
AT3G53260.1	CDX85544	AT5G15600.1	21798944
AT3G53260.1	CDX90984	AT5G15600.1	21798944
AT3G53260.1	CDY26443	AT5G15600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13306	Canola	peroxisome	41.96	98.1
CDX78161	Canola	cytosol	96.54	95.56
CDX73567	Canola	cytosol	96.33	95.36
CDY66761	Canola	cytosol, peroxisome, plastid	95.93	90.75
CDX76219	Canola	cytosol	95.32	89.66
Solyc03g036480.1.1	Tomato	peroxisome	17.11	82.35
Solyc03g036470.1.1	Tomato	mitochondrion	34.83	74.67
HORVU2Hr1G089540.1	Barley	peroxisome	69.86	73.13
Solyc03g078270.1.1	Tomato	endoplasmic reticulum	21.59	73.1
CDY18463	Canola	peroxisome	38.49	71.86
TraesCS1A01G094900.1	Wheat	cytosol, peroxisome, plastid	71.89	70.88
Bra003126.1-P	Field mustard	cytosol	96.94	67.33
Zm00001d029015_P001	Maize	peroxisome	53.36	65.83
TraesCS5B01G468400.1	Wheat	peroxisome	72.91	64.86
AT3G53260.1	Thale cress	cytosol	93.28	63.88
GSMUA_Achr8P18960_001	Banana	cytosol, peroxisome, plastid	75.56	61.73
Solyc03g071870.1.1	Tomato	peroxisome	21.59	61.63
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	64.56	60.96
Solyc10g011930.1.1	Tomato	cytosol	15.48	59.84
GSMUA_Achr1P09070_001	Banana	peroxisome	79.02	59.33
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	78.41	58.78
Zm00001d027249_P001	Maize	peroxisome	26.68	58.74
GSMUA_Achr5P18560_001	Banana	cytosol, peroxisome, plastid	77.8	58.59
GSMUA_Achr5P03950_001	Banana	cytosol, peroxisome, plastid	77.6	58.53
GSMUA_Achr2P00240_001	Banana	peroxisome	77.8	58.5
Solyc10g011920.1.1	Tomato	cytosol	15.07	58.27
Zm00001d020933_P001	Maize	mitochondrion	24.44	56.87
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	78.21	55.9
CDY00922	Canola	cytosol	80.24	55.81
GSMUA_Achr11P...	Banana	peroxisome	72.91	55.68
CDY08611	Canola	cytosol	80.04	55.67
PGSC0003DMT400080548	Potato	cytosol, peroxisome, plastid	80.24	55.41
Solyc10g086180.1.1	Tomato	extracellular	79.84	55.13
KRG91925	Soybean	cytosol, peroxisome, plastid	80.45	55.09
Solyc09g007910.2.1	Tomato	extracellular, nucleus	80.86	55.06
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	80.65	54.92
Solyc09g007920.2.1	Tomato	extracellular, nucleus	80.65	54.92
Zm00001d053619_P001	Maize	mitochondrion	47.05	54.61
Solyc09g007890.1.1	Tomato	plastid	79.84	54.52
PGSC0003DMT400055488	Potato	cytosol, peroxisome, plastid	80.04	54.43
TraesCS1D01G039300.1	Wheat	mitochondrion	58.25	54.27
PGSC0003DMT400055531	Potato	cytosol, peroxisome, plastid	79.23	54.1
TraesCS2D01G377600.1	Wheat	plastid	77.19	53.46
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	76.78	53.32
TraesCS2D01G218700.1	Wheat	peroxisome	76.78	53.32
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	76.58	53.18
TraesCS2D01G204700.1	Wheat	peroxisome	76.58	53.18
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	77.19	53.16
TraesCS2D01G204400.1	Wheat	peroxisome	72.3	53.14
PGSC0003DMT400049886	Potato	nucleus, peroxisome, plastid	74.54	53.12
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	76.37	53.12
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	76.58	53.11
Os04t0518400-01	Rice	extracellular, plasma membrane	77.19	53.08
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	77.19	53.08
TraesCS1D01G039400.1	Wheat	golgi	76.37	53.04
TraesCS2A01G196700.1	Wheat	peroxisome	76.37	53.04
TraesCS2A01G212900.1	Wheat	cytosol, peroxisome, plastid	76.37	53.04
TraesCS2B01G224000.1	Wheat	peroxisome	76.37	53.04
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	76.37	53.04
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	76.37	52.97
TraesCS1A01G037800.1	Wheat	cytosol, peroxisome, plastid	76.99	52.94
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	76.17	52.9
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	76.78	52.88
TraesCS2A01G381100.1	Wheat	plastid	76.78	52.88
TraesCS2B01G398000.2	Wheat	plastid	76.78	52.88
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	76.78	52.88
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	76.78	52.88
Zm00001d051164_P001	Maize	peroxisome	16.9	52.87
TraesCS1A01G037700.1	Wheat	cytosol, peroxisome, plastid	75.97	52.76
TraesCS2A01G381000.1	Wheat	plastid	76.58	52.73
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	76.58	52.73
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	76.58	52.73
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	76.58	52.66
TraesCS2A01G380800.1	Wheat	cytosol, peroxisome, plastid	76.37	52.59
TraesCS2A01G380900.1	Wheat	cytosol, peroxisome, plastid	76.37	52.59
TraesCS4A01G401300.1	Wheat	cytosol, peroxisome, plastid	76.37	52.59
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	76.37	52.52
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	76.37	52.52
Zm00001d017276_P001	Maize	peroxisome	75.15	52.41
Zm00001d003015_P001	Maize	peroxisome	76.17	52.31
OQU81984	Sorghum	peroxisome	75.97	52.24
TraesCS6B01G258500.1	Wheat	extracellular, unclear	75.97	52.24
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	76.17	52.23
Os02t0626400-01	Rice	mitochondrion, plasma membrane	76.37	52.23
Os02t0627100-01	Rice	plasma membrane	75.76	52.17
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	75.97	52.17
EES05455	Sorghum	cytosol, peroxisome, plastid	75.56	51.96
EES07176	Sorghum	cytosol, peroxisome, plastid	75.56	51.96
EES07177	Sorghum	cytosol, peroxisome, plastid	75.56	51.96
TraesCS6A01G222800.1	Wheat	cytosol, peroxisome, plastid	75.56	51.96
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	75.56	51.96
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	75.56	51.89
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	75.15	51.83
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	75.15	51.83
TraesCS6D01G212500.1	Wheat	peroxisome	75.15	51.83
Zm00001d051166_P001	Maize	extracellular	75.36	51.68
CDY15917	Canola	cytosol, peroxisome, plastid	73.12	51.43
TraesCS6A01G222700.1	Wheat	cytosol, peroxisome, plasma membrane	74.54	51.4
EES07175	Sorghum	cytosol, peroxisome, plastid	74.95	51.25
Zm00001d051163_P002	Maize	peroxisome	74.95	51.25
TraesCS2A01G196400.1	Wheat	mitochondrion, plastid	69.65	51.2
Zm00001d017275_P001	Maize	extracellular	74.95	51.18
TraesCS2B01G020100.1	Wheat	peroxisome	70.26	50.66
CDX99621	Canola	mitochondrion	56.21	50.46
HORVU2Hr1G089440.9	Barley	plasma membrane	77.19	49.41
Os02t0626600-00	Rice	plasma membrane	71.69	49.23
Os02t0626100-01	Rice	extracellular, plasma membrane	70.26	49.22
CDY18464	Canola	peroxisome	42.16	48.94
Os04t0518100-01	Rice	plasma membrane	70.26	48.8
EES12521	Sorghum	cytosol	69.86	48.79
TraesCS6A01G222900.1	Wheat	extracellular, golgi, unclear	69.65	48.58
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	69.65	48.58
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	69.65	48.58
Zm00001d051161_P003	Maize	plastid	69.45	48.51
EES07174	Sorghum	cytosol, peroxisome, plastid	69.45	48.44
Zm00001d033286_P001	Maize	peroxisome	68.84	48.42
Zm00001d017274_P001	Maize	plasma membrane	69.25	48.36
Os12t0520200-01	Rice	plasma membrane	66.19	47.79
TraesCS3A01G029200.1	Wheat	peroxisome	66.8	47.61
TraesCS3D01G016300.1	Wheat	peroxisome	66.8	47.61
TraesCS3B01G053900.1	Wheat	peroxisome	66.6	47.46
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	69.86	47.44
TraesCS3B01G027800.1	Wheat	mitochondrion	52.55	47.43
Solyc03g042560.1.1	Tomato	peroxisome	45.01	47.42
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	66.4	47.25
EER93773	Sorghum	peroxisome	67.62	46.83
HORVU2Hr1G062750.1	Barley	mitochondrion	17.52	46.74
PGSC0003DMT400080765	Potato	peroxisome	41.14	46.44
TraesCS3D01G016500.1	Wheat	peroxisome	64.56	46.01
TraesCSU01G030700.1	Wheat	peroxisome	63.34	45.8
Zm00001d003016_P001	Maize	plastid	70.47	43.85
CDY61769	Canola	peroxisome	21.79	42.29
HORVU6Hr1G058820.2	Barley	mitochondrion	60.69	42.03
GSMUA_Achr9P15990_001	Banana	peroxisome	57.23	39.97
PGSC0003DMT400055489	Potato	mitochondrion	31.77	39.9
VIT_11s0016g01640.t01	Wine grape	peroxisome	53.77	39.7
CDX74991	Canola	peroxisome	30.35	39.21
CDX91331	Canola	peroxisome	30.35	39.21
Solyc03g071860.2.1	Tomato	endoplasmic reticulum	27.9	37.53
VIT_11s0016g01520.t01	Wine grape	peroxisome	64.77	35.53
TraesCS2A01G212600.1	Wheat	cytosol	18.13	33.58
TraesCS2B01G398300.2	Wheat	peroxisome	24.24	32.34
Solyc03g078280.1.1	Tomato	peroxisome	14.05	26.74
VIT_11s0016g01510.t01	Wine grape	peroxisome	16.29	22.54
Os12t0461300-00	Rice	plastid	9.16	17.79
PGSC0003DMT400055529	Potato	cytosol	4.89	14.37
Os08t0308300-00	Rice	plastid	3.05	7.98
VIT_11s0016g01660.t01	Wine grape	peroxisome	0.41	1.15

Protein Annotations

KEGG:00360+4.3.1.24	KEGG:00940+4.3.1.24	Gene3D:1.10.275.10	Gene3D:1.20.200.10	MapMan:9.2.1.1.1	GO:A0A078BSE3
InterPro:Aromatic_Lyase	EnsemblPlants:CDX67566	ProteinID:CDX67566	ProteinID:CDX67566.1	InterPro:Fumarase/histidase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006559
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009800	GO:GO:0009987
GO:GO:0016841	GO:GO:0019748	GO:GO:0045548	EnsemblPlantsGene:GSBRNA2T00098702001	InterPro:IPR024083	InterPro:L-Aspartase-like
PFAM:PF00221	ScanProsite:PS00488	PANTHER:PTHR10362	PANTHER:PTHR10362:SF32	MetaCyc:PWY-1121	MetaCyc:PWY-5883
MetaCyc:PWY-6444	MetaCyc:PWY-6457	InterPro:Phe/His_NH3-lyase_AS	InterPro:Phe_NH3-lyase	SUPFAM:SSF48557	TIGRFAMs:TIGR01226
UniPathway:UPA00713	UniParc:UPI0004EE3DE5	:	:	:	:

Description

BnaA07g16060D

Coordinates

chrLK031787:-:975614..978449

Molecular Weight (calculated)

52864.3 Da

IEP (calculated)

5.805

GRAVY (calculated)

-0.087

Length

491 amino acids

Sequence
(BLAST)

001: MDQTQNDNIE TMLCGGVEKT NVAVAADPLN WGAAAEQMKG SHLDEVKRMV EEYRRPVVNL GGETLTIGQV AAISTVGNGV KVELAEASRA GVKASSDWVM
101: ESMGKGTDSY GVTTGFGATS HRRTKNGVAL QTELIRFLNA GIFVNTLLQG YSGIRFEILE AITSLLNHNI SPSLPLRGTI TASGDLVPLS YIAGLLTGRP
201: NSKATAPNGE SLTAEEAFKQ AGIASGFFDL QPKEGLALVN GTAVGSGMAS MVLFEANVQS VLAEVLSAIF AEVMSGKPEF TDHLTHRLKH HPGQIEAAAI
301: MEHILKGSSY MKLAQKVHEM DPLQKPKQDR YALRTSPQWL GPQIEVIRYA TRSIEREINS VNDNPLIDVS RNKAIHGGNF QGTPIGVSMD NTRLAVAAIG
401: KLMFAQFSEL VNDFYNNGLP SNLTASNNPS LDYGFKGAEI AMASYCSELQ YLANPVTSHF DKVFIAMCEG KIIDPLMDCL KEWNGAPIPI C

Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)

001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC

Arabidopsis Description

PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.