Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22160430
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G377500.1 | Wheat | cytosol, peroxisome, plastid | 99.29 | 98.74 |
| TraesCS2A01G381100.1 | Wheat | plastid | 98.87 | 98.32 |
| TraesCS2B01G398400.1 | Wheat | cytosol, peroxisome, plastid | 98.45 | 97.9 |
| TraesCS2D01G377200.1 | Wheat | cytosol, peroxisome, plastid | 97.88 | 97.34 |
| TraesCS2D01G377400.1 | Wheat | cytosol, peroxisome, plastid | 97.46 | 96.91 |
| TraesCS1D01G039300.1 | Wheat | mitochondrion | 70.8 | 95.26 |
| TraesCS1D01G039400.1 | Wheat | golgi | 94.5 | 94.77 |
| TraesCS1D01G039500.1 | Wheat | cytosol, peroxisome, plastid | 94.92 | 94.26 |
| TraesCS2D01G204400.1 | Wheat | peroxisome | 87.17 | 92.52 |
| TraesCS2D01G204700.1 | Wheat | peroxisome | 92.1 | 92.36 |
| TraesCS1D01G103500.1 | Wheat | cytosol, peroxisome, plastid | 91.96 | 92.09 |
| TraesCS2D01G218700.1 | Wheat | peroxisome | 91.68 | 91.94 |
| Os04t0518400-01 | Rice | extracellular, plasma membrane | 91.82 | 91.18 |
| HORVU2Hr1G089440.9 | Barley | plasma membrane | 97.74 | 90.35 |
| OQU81984 | Sorghum | peroxisome | 90.13 | 89.5 |
| Zm00001d003015_P001 | Maize | peroxisome | 88.58 | 87.83 |
| TraesCS6D01G212400.1 | Wheat | cytosol, peroxisome, plastid | 87.45 | 86.83 |
| TraesCS6D01G212500.1 | Wheat | peroxisome | 86.18 | 85.81 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 11.71 | 81.37 |
| CDY18464 | Canola | peroxisome | 47.39 | 79.43 |
| PGSC0003DMT400080765 | Potato | peroxisome | 48.24 | 78.62 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 24.96 | 77.29 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 42.6 | 77.24 |
| CDX67566 | Canola | cytosol | 53.46 | 77.19 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 50.63 | 77.04 |
| CDX78161 | Canola | cytosol | 53.88 | 77.02 |
| CDX73567 | Canola | cytosol | 53.88 | 77.02 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 73.77 | 76.13 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 55.71 | 76.11 |
| Bra003126.1-P | Field mustard | cytosol | 75.46 | 75.67 |
| Solyc10g086180.1.1 | Tomato | extracellular | 75.6 | 75.39 |
| CDX76219 | Canola | cytosol | 55.43 | 75.29 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 75.46 | 75.25 |
| Bra029831.1-P | Field mustard | cytosol | 74.75 | 75.07 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 76.45 | 75.07 |
| AT3G10340.1 | Thale cress | peroxisome | 74.75 | 74.96 |
| CDY08611 | Canola | cytosol | 74.61 | 74.93 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 76.16 | 74.79 |
| CDY00922 | Canola | cytosol | 74.47 | 74.79 |
| AT3G53260.1 | Thale cress | cytosol | 75.6 | 74.76 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 75.6 | 74.76 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 75.88 | 74.62 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 75.88 | 74.62 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 75.74 | 74.48 |
| Bra006985.1-P | Field mustard | cytosol | 73.91 | 74.22 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 75.88 | 74.21 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 71.79 | 73.88 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 74.75 | 73.71 |
| TraesCS6D01G212200.1 | Wheat | extracellular, golgi, unclear | 72.78 | 73.3 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 26.66 | 73.26 |
| Solyc09g007890.1.1 | Tomato | plastid | 73.62 | 72.6 |
| Bra039777.1-P | Field mustard | peroxisome | 52.19 | 72.55 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 36.67 | 71.23 |
| CDX99621 | Canola | mitochondrion | 54.44 | 70.57 |
| AT5G04230.2 | Thale cress | peroxisome | 68.83 | 69.91 |
| TraesCS3D01G016300.1 | Wheat | peroxisome | 67.0 | 68.94 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 13.96 | 68.28 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 66.57 | 67.62 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 66.43 | 67.48 |
| TraesCS3D01G016500.1 | Wheat | peroxisome | 65.3 | 67.2 |
| Bra005221.1-P | Field mustard | peroxisome | 34.84 | 66.58 |
| CDY13306 | Canola | peroxisome | 19.32 | 65.24 |
| PGSC0003DMT400055529 | Potato | cytosol | 15.23 | 64.67 |
| CDX91331 | Canola | peroxisome | 34.56 | 64.47 |
| CDX74991 | Canola | peroxisome | 34.56 | 64.47 |
| CDY18463 | Canola | peroxisome | 23.7 | 63.88 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 54.02 | 57.59 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 13.54 | 55.81 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 55.15 | 55.62 |
| CDY61769 | Canola | peroxisome | 19.18 | 53.75 |
| Bra028793.1-P | Field mustard | peroxisome | 22.0 | 53.06 |
| Solyc10g011930.1.1 | Tomato | cytosol | 9.45 | 52.76 |
| Solyc10g011920.1.1 | Tomato | cytosol | 9.31 | 51.97 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 62.2 | 49.27 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 11.99 | 48.85 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 13.96 | 27.89 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
| ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF9 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
| SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | EnsemblPlantsGene:TraesCS2D01G377600 | EnsemblPlants:TraesCS2D01G377600.1 | TIGR:cd00332 | SEG:seg |
Description
No Description!
Coordinates
chr2D:+:481988410..481990655
Molecular Weight (calculated)
76871.3 Da
IEP (calculated)
6.083
GRAVY (calculated)
-0.126
Length
709 amino acids
Sequence
(BLAST)
(BLAST)
001: MECENVNGDG LCVAQPARAD PLNWGKAAEE LSGSHLEAVK RMVEEYRKPV VTMEGASLTI AMVAAVAAGS DTRVELDESA RGRVKESSDW VMNSMMNGTD
101: SYGVTTGFGA TSHRRTKEGG ALQRELIRFL NAGAFGTGTD GHVLPAAATR AAMLVRVNTL LQGYSGIRFE ILETIATLLN ANVTPCLPLR GTITASGDLV
201: PLSYIAGLVT GRPNSMATAP DGSKVNAAEA FKIAGIQHGF FELQPKEGLA MVNGTAVGSG LASMVLFEAN VLSLLAEVLS AVFCEVMNGK PEFTDHLTHK
301: LKHHPGQIEA AAIMEHILEG SSYMMLAKKL GELDPLMKPK QDRYALRTSP QWLGPQIEVI RAATKSIERE INSVNDNPLI DVSRGKAIHG GNFQGTPIGV
401: SMDNTRLAIA AIGKLMFAQF SELVNDFYNN GLPSNLSGGR NPSLDYGFKG AEIAMASYCS ELQFLGNPVT NHVQSAEQHN QDVNSLGLIS SRKTAEAIDI
501: LKLMSSTFLV ALCQAIDLRH LEENVKNAVK SCVKTVARKT LSTDNNGHLH KARFCEKDLL LIIDREAVFV YADDPCSANY PLMQKMRAVL VEHALANGEA
601: ERDVETSVFA KLAMFEQELR AVLPKEVEAA RSAVENGTAT QQNRIADCRS YPLYRFVRKE LGTEYLTGEK TRSPGEEVDK VFVAMNQGKH IDALLECLKE
701: WNGEPLPIC
101: SYGVTTGFGA TSHRRTKEGG ALQRELIRFL NAGAFGTGTD GHVLPAAATR AAMLVRVNTL LQGYSGIRFE ILETIATLLN ANVTPCLPLR GTITASGDLV
201: PLSYIAGLVT GRPNSMATAP DGSKVNAAEA FKIAGIQHGF FELQPKEGLA MVNGTAVGSG LASMVLFEAN VLSLLAEVLS AVFCEVMNGK PEFTDHLTHK
301: LKHHPGQIEA AAIMEHILEG SSYMMLAKKL GELDPLMKPK QDRYALRTSP QWLGPQIEVI RAATKSIERE INSVNDNPLI DVSRGKAIHG GNFQGTPIGV
401: SMDNTRLAIA AIGKLMFAQF SELVNDFYNN GLPSNLSGGR NPSLDYGFKG AEIAMASYCS ELQFLGNPVT NHVQSAEQHN QDVNSLGLIS SRKTAEAIDI
501: LKLMSSTFLV ALCQAIDLRH LEENVKNAVK SCVKTVARKT LSTDNNGHLH KARFCEKDLL LIIDREAVFV YADDPCSANY PLMQKMRAVL VEHALANGEA
601: ERDVETSVFA KLAMFEQELR AVLPKEVEAA RSAVENGTAT QQNRIADCRS YPLYRFVRKE LGTEYLTGEK TRSPGEEVDK VFVAMNQGKH IDALLECLKE
701: WNGEPLPIC
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.