Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- endoplasmic reticulum 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2A01G381000.1 | Wheat | plastid | 91.48 | 87.38 |
TraesCS2D01G377400.1 | Wheat | cytosol, peroxisome, plastid | 91.19 | 87.1 |
TraesCS2B01G398000.2 | Wheat | plastid | 91.04 | 86.96 |
TraesCS2B01G398400.1 | Wheat | cytosol, peroxisome, plastid | 90.9 | 86.82 |
TraesCS2B01G398200.1 | Wheat | cytosol, peroxisome, plastid | 90.75 | 86.68 |
TraesCS1B01G048400.2 | Wheat | cytosol, peroxisome, plastid | 89.28 | 86.0 |
TraesCS2B01G398300.2 | Wheat | peroxisome | 46.4 | 85.87 |
TraesCS1B01G048100.1 | Wheat | cytosol, peroxisome, plastid | 89.87 | 85.71 |
TraesCS1B01G048500.1 | Wheat | cytosol, peroxisome, plastid | 89.57 | 85.43 |
TraesCS5B01G468300.1 | Wheat | cytosol, peroxisome, plastid | 88.69 | 85.43 |
TraesCS1B01G048200.1 | Wheat | cytosol, peroxisome, plastid | 89.43 | 85.29 |
TraesCS1B01G048300.1 | Wheat | cytosol, peroxisome, plastid | 88.4 | 84.43 |
TraesCS5B01G468400.1 | Wheat | peroxisome | 67.99 | 83.88 |
TraesCS2B01G224000.1 | Wheat | peroxisome | 86.93 | 83.73 |
TraesCS1B01G122800.1 | Wheat | cytosol, peroxisome, plastid | 86.64 | 83.33 |
TraesCS2B01G398100.1 | Wheat | cytosol, peroxisome, plastid | 63.58 | 83.27 |
TraesCS2B01G224300.1 | Wheat | cytosol, peroxisome, plastid | 86.05 | 83.0 |
Os04t0518400-01 | Rice | extracellular, plasma membrane | 86.34 | 82.35 |
HORVU2Hr1G089440.9 | Barley | plasma membrane | 91.19 | 80.96 |
OQU81984 | Sorghum | peroxisome | 84.14 | 80.25 |
Zm00001d003015_P001 | Maize | peroxisome | 83.7 | 79.72 |
TraesCS6B01G258600.1 | Wheat | cytosol, peroxisome, plasma membrane | 81.2 | 77.67 |
TraesCS6B01G258500.1 | Wheat | extracellular, unclear | 81.2 | 77.45 |
Solyc03g036480.1.1 | Tomato | peroxisome | 11.6 | 77.45 |
CDY18464 | Canola | peroxisome | 45.52 | 73.29 |
PGSC0003DMT400080765 | Potato | peroxisome | 45.96 | 71.95 |
Solyc03g036470.1.1 | Tomato | mitochondrion | 23.94 | 71.18 |
Solyc03g042560.1.1 | Tomato | peroxisome | 48.16 | 70.39 |
CDX67566 | Canola | cytosol | 50.66 | 70.26 |
CDX73567 | Canola | cytosol | 51.1 | 70.16 |
CDX78161 | Canola | cytosol | 51.1 | 70.16 |
PGSC0003DMT400055489 | Potato | mitochondrion | 40.23 | 70.08 |
Bra003126.1-P | Field mustard | cytosol | 71.95 | 69.31 |
CDY66761 | Canola | cytosol, peroxisome, plastid | 52.72 | 69.17 |
CDX76219 | Canola | cytosol | 52.72 | 68.77 |
Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 72.83 | 68.7 |
AT3G53260.1 | Thale cress | cytosol | 72.1 | 68.48 |
KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 69.02 | 68.41 |
Solyc10g086180.1.1 | Tomato | extracellular | 70.93 | 67.93 |
AT3G10340.1 | Thale cress | peroxisome | 70.48 | 67.89 |
Bra006985.1-P | Field mustard | cytosol | 70.34 | 67.85 |
PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 70.78 | 67.79 |
Bra029831.1-P | Field mustard | cytosol | 70.04 | 67.56 |
PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 68.28 | 67.49 |
AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 71.81 | 67.45 |
CDY08611 | Canola | cytosol | 69.9 | 67.42 |
TraesCS6B01G258400.2 | Wheat | cytosol, peroxisome, plastid | 69.6 | 67.33 |
CDY00922 | Canola | cytosol | 69.75 | 67.28 |
KRG91925 | Soybean | cytosol, peroxisome, plastid | 70.78 | 67.22 |
PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 70.93 | 66.9 |
Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 70.78 | 66.85 |
Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 70.63 | 66.71 |
Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 70.63 | 66.71 |
Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 35.68 | 66.58 |
TraesCS3B01G027800.1 | Wheat | mitochondrion | 52.86 | 66.18 |
PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 69.75 | 66.06 |
Solyc03g078280.1.1 | Tomato | peroxisome | 24.96 | 65.89 |
Bra039777.1-P | Field mustard | peroxisome | 49.34 | 65.88 |
Solyc09g007890.1.1 | Tomato | plastid | 68.87 | 65.23 |
CDX99621 | Canola | mitochondrion | 51.84 | 64.53 |
PGSC0003DMT400055529 | Potato | cytosol | 15.71 | 64.07 |
AT5G04230.2 | Thale cress | peroxisome | 65.05 | 63.47 |
TraesCS3B01G053900.1 | Wheat | peroxisome | 63.14 | 62.41 |
Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 62.56 | 61.03 |
CDY15917 | Canola | cytosol, peroxisome, plastid | 62.56 | 61.03 |
Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 12.92 | 60.69 |
Bra005221.1-P | Field mustard | peroxisome | 32.16 | 59.03 |
CDY18463 | Canola | peroxisome | 22.32 | 57.79 |
CDY13306 | Canola | peroxisome | 17.62 | 57.14 |
CDX74991 | Canola | peroxisome | 31.86 | 57.11 |
CDX91331 | Canola | peroxisome | 31.86 | 57.11 |
VIT_11s0016g01640.t01 | Wine grape | peroxisome | 50.37 | 51.58 |
GSMUA_Achr9P15990_001 | Banana | peroxisome | 52.28 | 50.64 |
Bra028793.1-P | Field mustard | peroxisome | 21.0 | 48.64 |
CDY61769 | Canola | peroxisome | 17.91 | 48.22 |
Solyc03g071870.1.1 | Tomato | peroxisome | 11.75 | 46.51 |
Solyc10g011930.1.1 | Tomato | cytosol | 8.66 | 46.46 |
Solyc10g011920.1.1 | Tomato | cytosol | 8.52 | 45.67 |
VIT_11s0016g01520.t01 | Wine grape | peroxisome | 58.3 | 44.36 |
VIT_11s0016g01660.t01 | Wine grape | peroxisome | 10.43 | 40.8 |
VIT_11s0016g01510.t01 | Wine grape | peroxisome | 12.19 | 23.38 |
Protein Annotations
KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF9 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | EnsemblPlantsGene:TraesCS2B01G020100 | EnsemblPlants:TraesCS2B01G020100.1 | TIGR:cd00332 | SEG:seg |
Description
No Description!
Coordinates
chr2B:-:9281721..9284724
Molecular Weight (calculated)
74442.6 Da
IEP (calculated)
5.998
GRAVY (calculated)
-0.131
Length
681 amino acids
Sequence
(BLAST)
(BLAST)
001: MECENVHVAD GLLVAQPARA DPLNWGKAAE ELSGSHLDAV KRMVEEYRRP VVTMEGASLT IGMVATVAAG AVTRVELDES ARGRVKESSG WVMNSMTNGT
101: DSYYGDAASH RTTKEVSALQ RELVRCFNAG AFDTGKDGHV LPAAATRAAM LVRVNTLLQG YSGVRFEILE TIVTLLNTNV TPCLPLRGTL TASGDLVPLS
201: YIACLVTGRP NCMATTPDGT KVNAAEAFKM AGIQHGFFEL QPKEGLAMMN STAVGSGLAS MVLFEANILG LLAEVLSAVF CEVMNGNPEY TDHLTHKLKH
301: HPGQIEAAAI MEHILEGSSY MMLKKKLDEL DTPMKPKQDR YALRTSPQWL GPQIEVILSA TKSIEREINS VNNNPLIDIS RGKAIHGGNF QGTPIGVSMD
401: NTRLAIAAIG KLMFAQFSEL VNDFYNNGLP SNLSGGRNLS LDYGFKGVEI AMASYCSELQ FLGNPVTNHV QSAEQHNQGV NSLLISSRKT TEAIDILKLM
501: SSTFLVALCQ ARKTLVTNNN GHLHNARFCE KDLLLTVDRE MVFTYADDPC SANYPLMQKM RAVLVENALA NGEAERDVET SVFAKLAMFE QELRAVLPKE
601: VEAARSAMEN GTAAQQNRII ECRSYPLYRF VRKELGTEYL TGEKTRSPGE EVDKVFVAMN KHIDALLECL KEWNGEPLPI R
101: DSYYGDAASH RTTKEVSALQ RELVRCFNAG AFDTGKDGHV LPAAATRAAM LVRVNTLLQG YSGVRFEILE TIVTLLNTNV TPCLPLRGTL TASGDLVPLS
201: YIACLVTGRP NCMATTPDGT KVNAAEAFKM AGIQHGFFEL QPKEGLAMMN STAVGSGLAS MVLFEANILG LLAEVLSAVF CEVMNGNPEY TDHLTHKLKH
301: HPGQIEAAAI MEHILEGSSY MMLKKKLDEL DTPMKPKQDR YALRTSPQWL GPQIEVILSA TKSIEREINS VNNNPLIDIS RGKAIHGGNF QGTPIGVSMD
401: NTRLAIAAIG KLMFAQFSEL VNDFYNNGLP SNLSGGRNLS LDYGFKGVEI AMASYCSELQ FLGNPVTNHV QSAEQHNQGV NSLLISSRKT TEAIDILKLM
501: SSTFLVALCQ ARKTLVTNNN GHLHNARFCE KDLLLTVDRE MVFTYADDPC SANYPLMQKM RAVLVENALA NGEAERDVET SVFAKLAMFE QELRAVLPKE
601: VEAARSAMEN GTAAQQNRII ECRSYPLYRF VRKELGTEYL TGEKTRSPGE EVDKVFVAMN KHIDALLECL KEWNGEPLPI R
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.