Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- peroxisome 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400055489 | Potato | mitochondrion | 83.91 | 93.35 |
Solyc03g078280.1.1 | Tomato | peroxisome | 54.25 | 91.47 |
PGSC0003DMT400055529 | Potato | cytosol | 33.56 | 87.43 |
Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 73.1 | 87.12 |
CDY18464 | Canola | peroxisome | 82.07 | 84.4 |
TraesCS2B01G398300.2 | Wheat | peroxisome | 53.79 | 63.59 |
TraesCS1D01G039300.1 | Wheat | mitochondrion | 71.49 | 59.01 |
PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 92.41 | 58.35 |
PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 95.86 | 58.0 |
PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 94.71 | 57.06 |
CDX99621 | Canola | mitochondrion | 71.72 | 57.04 |
PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 90.8 | 55.56 |
KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 85.29 | 54.0 |
TraesCS3B01G027800.1 | Wheat | mitochondrion | 66.21 | 52.94 |
Bra006985.1-P | Field mustard | cytosol | 83.91 | 51.7 |
KRG91925 | Soybean | cytosol, peroxisome, plastid | 85.06 | 51.6 |
VIT_13s0019g04460.t01 | Wine grape | cytosol, endoplasmic reticulum, peroxisome | 85.52 | 51.45 |
Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 84.6 | 50.97 |
TraesCS2D01G204400.1 | Wheat | peroxisome | 78.16 | 50.9 |
AT3G10340.1 | Thale cress | peroxisome | 82.53 | 50.78 |
AT3G53260.1 | Thale cress | cytosol | 83.68 | 50.77 |
Bra003126.1-P | Field mustard | cytosol | 82.3 | 50.64 |
PGSC0003DMT400060308 | Potato | cytosol, peroxisome, plastid | 82.3 | 50.64 |
GSMUA_Achr1P09070_001 | Banana | peroxisome | 75.86 | 50.46 |
Bra029831.1-P | Field mustard | cytosol | 81.84 | 50.42 |
AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 83.91 | 50.34 |
CDY08611 | Canola | cytosol | 81.61 | 50.28 |
GSMUA_Achr5P18560_001 | Banana | cytosol, peroxisome, plastid | 74.71 | 49.85 |
CDY00922 | Canola | cytosol | 80.69 | 49.72 |
GSMUA_Achr5P03950_001 | Banana | cytosol, peroxisome, plastid | 74.25 | 49.62 |
GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 74.25 | 49.31 |
GSMUA_Achr2P00240_001 | Banana | peroxisome | 73.79 | 49.16 |
TraesCS5B01G468300.1 | Wheat | cytosol, peroxisome, plastid | 78.85 | 48.51 |
TraesCS1B01G048400.2 | Wheat | cytosol, peroxisome, plastid | 78.62 | 48.37 |
Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 16.09 | 48.28 |
TraesCS1B01G048300.1 | Wheat | cytosol, peroxisome, plastid | 79.08 | 48.25 |
TraesCS2D01G377600.1 | Wheat | plastid | 78.62 | 48.24 |
TraesCS2D01G218700.1 | Wheat | peroxisome | 78.39 | 48.23 |
TraesCS1B01G122800.1 | Wheat | cytosol, peroxisome, plastid | 78.39 | 48.16 |
TraesCS2B01G398000.2 | Wheat | plastid | 78.85 | 48.11 |
TraesCS2D01G204700.1 | Wheat | peroxisome | 78.16 | 48.09 |
GSMUA_Achr11P... | Banana | peroxisome | 71.03 | 48.06 |
TraesCS2D01G377200.1 | Wheat | cytosol, peroxisome, plastid | 78.62 | 47.97 |
HORVU1Hr1G022060.1 | Barley | cytosol, peroxisome, plastid | 77.93 | 47.95 |
HORVU2Hr1G038120.1 | Barley | cytosol, peroxisome, plastid | 77.93 | 47.95 |
TraesCS1D01G039400.1 | Wheat | golgi | 77.93 | 47.95 |
TraesCS2B01G224000.1 | Wheat | peroxisome | 77.93 | 47.95 |
GSMUA_Achr8P18960_001 | Banana | cytosol, peroxisome, plastid | 66.21 | 47.92 |
TraesCS1B01G048200.1 | Wheat | cytosol, peroxisome, plastid | 78.62 | 47.9 |
TraesCS1B01G048500.1 | Wheat | cytosol, peroxisome, plastid | 78.62 | 47.9 |
TraesCS1D01G039500.1 | Wheat | cytosol, peroxisome, plastid | 78.62 | 47.9 |
TraesCS2B01G224300.1 | Wheat | cytosol, peroxisome, plastid | 77.7 | 47.88 |
TraesCS2D01G377500.1 | Wheat | cytosol, peroxisome, plastid | 78.39 | 47.83 |
TraesCS1B01G048100.1 | Wheat | cytosol, peroxisome, plastid | 78.39 | 47.76 |
TraesCS1D01G103500.1 | Wheat | cytosol, peroxisome, plastid | 77.7 | 47.74 |
Zm00001d003015_P001 | Maize | peroxisome | 78.39 | 47.69 |
TraesCS2B01G398200.1 | Wheat | cytosol, peroxisome, plastid | 78.16 | 47.69 |
TraesCS2B01G398400.1 | Wheat | cytosol, peroxisome, plastid | 78.16 | 47.69 |
TraesCS2D01G377400.1 | Wheat | cytosol, peroxisome, plastid | 78.16 | 47.69 |
OQU81984 | Sorghum | peroxisome | 78.16 | 47.62 |
Os04t0518400-01 | Rice | extracellular, plasma membrane | 78.16 | 47.62 |
Os02t0626600-00 | Rice | plasma membrane | 78.16 | 47.55 |
TraesCS6B01G258500.1 | Wheat | extracellular, unclear | 77.93 | 47.48 |
HORVU0Hr1G016330.1 | Barley | cytosol, peroxisome, plastid | 77.93 | 47.41 |
TraesCS6D01G212400.1 | Wheat | cytosol, peroxisome, plastid | 77.7 | 47.34 |
Zm00001d017276_P001 | Maize | peroxisome | 76.55 | 47.3 |
Zm00001d017275_P001 | Maize | extracellular | 78.16 | 47.29 |
Os02t0626400-01 | Rice | mitochondrion, plasma membrane | 77.93 | 47.21 |
Os02t0627100-01 | Rice | plasma membrane | 77.24 | 47.12 |
EES07175 | Sorghum | cytosol, peroxisome, plastid | 77.7 | 47.08 |
Os05t0427400-00 | Rice | cytosol, peroxisome, plastid | 77.47 | 47.07 |
EES05455 | Sorghum | cytosol, peroxisome, plastid | 77.24 | 47.06 |
EES07176 | Sorghum | cytosol, peroxisome, plastid | 77.24 | 47.06 |
EES07177 | Sorghum | cytosol, peroxisome, plastid | 77.24 | 47.06 |
HORVU6Hr1G058840.1 | Barley | cytosol, peroxisome, plasma membrane | 77.01 | 47.05 |
TraesCS2B01G398100.1 | Wheat | cytosol, peroxisome, plastid | 56.09 | 46.92 |
TraesCS6B01G258600.1 | Wheat | cytosol, peroxisome, plasma membrane | 76.78 | 46.91 |
HORVU2Hr1G038140.1 | Barley | mitochondrion, plastid | 77.93 | 46.89 |
Zm00001d017279_P001 | Maize | cytosol, peroxisome, plastid | 77.01 | 46.85 |
Zm00001d051163_P002 | Maize | peroxisome | 77.24 | 46.8 |
TraesCS6D01G212500.1 | Wheat | peroxisome | 76.32 | 46.63 |
AT5G04230.2 | Thale cress | peroxisome | 74.71 | 46.56 |
Os04t0518100-01 | Rice | plasma membrane | 75.63 | 46.53 |
Zm00001d051166_P001 | Maize | extracellular | 76.32 | 46.37 |
TraesCS2B01G020100.1 | Wheat | peroxisome | 71.95 | 45.96 |
Zm00001d017274_P001 | Maize | plasma membrane | 73.1 | 45.23 |
Os02t0626100-01 | Rice | extracellular, plasma membrane | 72.87 | 45.22 |
EES07174 | Sorghum | cytosol, peroxisome, plastid | 72.87 | 45.03 |
TraesCS6B01G258400.2 | Wheat | cytosol, peroxisome, plastid | 72.87 | 45.03 |
TraesCS6D01G212200.1 | Wheat | extracellular, golgi, unclear | 72.87 | 45.03 |
Bra005221.1-P | Field mustard | peroxisome | 38.39 | 45.01 |
EES12521 | Sorghum | cytosol | 72.64 | 44.95 |
Zm00001d051161_P003 | Maize | plastid | 72.41 | 44.81 |
HORVU2Hr1G089440.9 | Barley | plasma membrane | 78.85 | 44.72 |
HORVU6Hr1G058820.2 | Barley | mitochondrion | 72.87 | 44.71 |
Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 71.72 | 44.7 |
CDY15917 | Canola | cytosol, peroxisome, plastid | 71.72 | 44.7 |
CDX74991 | Canola | peroxisome | 37.93 | 43.42 |
CDX91331 | Canola | peroxisome | 37.93 | 43.42 |
Zm00001d033286_P001 | Maize | peroxisome | 69.43 | 43.27 |
Os12t0520200-01 | Rice | plasma membrane | 66.44 | 42.5 |
PGSC0003DMT400014003 | Potato | peroxisome | 65.06 | 42.43 |
HORVU3Hr1G005330.2 | Barley | cytosol, peroxisome, plasma membrane | 66.9 | 42.17 |
TraesCS3D01G016300.1 | Wheat | peroxisome | 66.67 | 42.09 |
TraesCS3B01G053900.1 | Wheat | peroxisome | 66.44 | 41.94 |
CDX73567 | Canola | cytosol | 47.82 | 41.94 |
CDX78161 | Canola | cytosol | 47.82 | 41.94 |
EER93773 | Sorghum | peroxisome | 67.82 | 41.61 |
CDX67566 | Canola | cytosol | 46.44 | 41.14 |
TraesCS5B01G468400.1 | Wheat | peroxisome | 51.95 | 40.94 |
TraesCS3D01G016500.1 | Wheat | peroxisome | 64.37 | 40.64 |
Zm00001d003016_P001 | Maize | plastid | 73.33 | 40.43 |
Bra039777.1-P | Field mustard | peroxisome | 46.67 | 39.8 |
CDY66761 | Canola | cytosol, peroxisome, plastid | 47.36 | 39.69 |
CDX76219 | Canola | cytosol | 47.36 | 39.46 |
GSMUA_Achr9P15990_001 | Banana | peroxisome | 61.84 | 38.26 |
Os12t0461300-00 | Rice | plastid | 21.84 | 37.55 |
HORVU2Hr1G089540.1 | Barley | peroxisome | 37.7 | 34.97 |
Zm00001d029015_P001 | Maize | peroxisome | 30.34 | 33.17 |
Os08t0308300-00 | Rice | plastid | 13.33 | 30.85 |
CDY13306 | Canola | peroxisome | 12.64 | 26.19 |
Bra028793.1-P | Field mustard | peroxisome | 14.94 | 22.11 |
Zm00001d027249_P001 | Maize | peroxisome | 11.26 | 21.97 |
Zm00001d053619_P001 | Maize | mitochondrion | 19.31 | 19.86 |
Zm00001d020933_P001 | Maize | mitochondrion | 8.51 | 17.54 |
CDY61769 | Canola | peroxisome | 9.89 | 17.0 |
HORVU2Hr1G062750.1 | Barley | mitochondrion | 2.76 | 6.52 |
CDY18463 | Canola | peroxisome | 1.38 | 2.28 |
Zm00001d051164_P001 | Maize | peroxisome | 0.69 | 1.91 |
Solyc03g071870.1.1 | Tomato | peroxisome | 0.23 | 0.58 |
Protein Annotations
KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.20.200.10 | EntrezGene:102596891 | MapMan:9.2.1.1.1 |
InterPro:Aromatic_Lyase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
GO:GO:0016829 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:L-Aspartase-like | UniProt:M1D3Y2 | PFAM:PF00221 |
EnsemblPlantsGene:PGSC0003DMG400031457 | PGSC:PGSC0003DMG400031457 | EnsemblPlants:PGSC0003DMT400080765 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF32 | InterPro:Phe_NH3-lyase |
InterPro:Phe_NH3-lyase_shielding_dom_sf | SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | UniParc:UPI000294FB77 | RefSeq:XP_006367534.2 | : |
Description
Phenylalanine ammonia-lyase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400031457]
Coordinates
chr3:-:17248040..17249552
Molecular Weight (calculated)
48345.1 Da
IEP (calculated)
6.146
GRAVY (calculated)
-0.262
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEVLSAIFA EVMNGKPEFT DYLTHKLKHH PGQIEAAAIM EHILDGSSYV KAAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRAAT KMIEREINSV
101: NDNPLIDVSR NKAIHGGNFQ GTPIGVSMDN TRLALASIGK LMFAQFSELV NDYYNNGLPS NLTAGRNPSL DYGFKGAEIA MASYCSELQF LANPVTNHVQ
201: SAEQHNQDVN SLGLISARKT AEAVDILKLM SSTYLVALCQ AIDLRHLEEN LKSVVKNTVS QVAKRTLTIG AIGELHPARF CEKELLRVVD REYLFTYADD
301: PCSSTYPLMQ KLRQVLVDHA MKNGESEKNI NSSIFQKIGA FEDELNAVLP KEVESARALL ESGNPSIPNR ITECRSYPLY RLVRQELGTE LLTGEKVRSP
401: GEEIEKVFTA MCNGQIIDPL LECLKSWNGA PLPIC
101: NDNPLIDVSR NKAIHGGNFQ GTPIGVSMDN TRLALASIGK LMFAQFSELV NDYYNNGLPS NLTAGRNPSL DYGFKGAEIA MASYCSELQF LANPVTNHVQ
201: SAEQHNQDVN SLGLISARKT AEAVDILKLM SSTYLVALCQ AIDLRHLEEN LKSVVKNTVS QVAKRTLTIG AIGELHPARF CEKELLRVVD REYLFTYADD
301: PCSSTYPLMQ KLRQVLVDHA MKNGESEKNI NSSIFQKIGA FEDELNAVLP KEVESARALL ESGNPSIPNR ITECRSYPLY RLVRQELGTE LLTGEKVRSP
401: GEEIEKVFTA MCNGQIIDPL LECLKSWNGA PLPIC
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.