Skip to main content
crop-pal logo
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • peroxisome 2
  • cytosol 2
  • mitochondrion 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 PGSC0003DMT400049886 AT2G37040.1 21798944
AT2G37040.1 PGSC0003DMT400055488 AT2G37040.1 21798944
AT2G37040.1 PGSC0003DMT400055489 AT2G37040.1 21798944
AT2G37040.1 PGSC0003DMT400055529 AT2G37040.1 21798944
AT2G37040.1 PGSC0003DMT400055531 AT2G37040.1 21798944
AT2G37040.1 PGSC0003DMT400080548 AT2G37040.1 21798944
AT2G37040.1 PGSC0003DMT400080765 AT2G37040.1 21798944
AT2G37040.1 PGSC0003DMT400049886 AT3G10340.1 21798944
AT2G37040.1 PGSC0003DMT400055488 AT3G10340.1 21798944
AT2G37040.1 PGSC0003DMT400055489 AT3G10340.1 21798944
AT2G37040.1 PGSC0003DMT400055529 AT3G10340.1 21798944
AT2G37040.1 PGSC0003DMT400055531 AT3G10340.1 21798944
AT2G37040.1 PGSC0003DMT400080548 AT3G10340.1 21798944
AT2G37040.1 PGSC0003DMT400080765 AT3G10340.1 21798944
AT3G10340.1 PGSC0003DMT400006583 AT1G15670.1 21798944
AT3G10340.1 PGSC0003DMT400006584 AT1G15670.1 21798944
AT3G10340.1 PGSC0003DMT400042650 AT1G15670.1 21798944
AT3G10340.1 PGSC0003DMT400042651 AT1G15670.1 21798944
AT3G10340.1 PGSC0003DMT400042652 AT1G15670.1 21798944
AT3G53260.1 PGSC0003DMT400049886 AT3G10340.1 21798944
AT3G53260.1 PGSC0003DMT400055488 AT3G10340.1 21798944
AT3G53260.1 PGSC0003DMT400055489 AT3G10340.1 21798944
AT3G53260.1 PGSC0003DMT400055529 AT3G10340.1 21798944
AT3G53260.1 PGSC0003DMT400055531 AT3G10340.1 21798944
AT3G53260.1 PGSC0003DMT400080548 AT3G10340.1 21798944
AT3G53260.1 PGSC0003DMT400080765 AT3G10340.1 21798944
AT3G53260.1 PGSC0003DMT400049886 AT3G53260.1 21798944
AT3G53260.1 PGSC0003DMT400055488 AT3G53260.1 21798944
AT3G53260.1 PGSC0003DMT400055489 AT3G53260.1 21798944
AT3G53260.1 PGSC0003DMT400055529 AT3G53260.1 21798944
AT3G53260.1 PGSC0003DMT400055531 AT3G53260.1 21798944
AT3G53260.1 PGSC0003DMT400080548 AT3G53260.1 21798944
AT3G53260.1 PGSC0003DMT400080765 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400055489 Potato mitochondrion 83.91 93.35
Solyc03g078280.1.1 Tomato peroxisome 54.25 91.47
PGSC0003DMT400055529 Potato cytosol 33.56 87.43
Solyc03g071860.2.1 Tomato endoplasmic reticulum 73.1 87.12
CDY18464 Canola peroxisome 82.07 84.4
TraesCS2B01G398300.2 Wheat peroxisome 53.79 63.59
TraesCS1D01G039300.1 Wheat mitochondrion 71.49 59.01
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 92.41 58.35
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 95.86 58.0
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 94.71 57.06
CDX99621 Canola mitochondrion 71.72 57.04
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 90.8 55.56
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 85.29 54.0
TraesCS3B01G027800.1 Wheat mitochondrion 66.21 52.94
Bra006985.1-P Field mustard cytosol 83.91 51.7
KRG91925 Soybean cytosol, peroxisome, plastid 85.06 51.6
VIT_13s0019g04460.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 85.52 51.45
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 84.6 50.97
TraesCS2D01G204400.1 Wheat peroxisome 78.16 50.9
AT3G10340.1 Thale cress peroxisome 82.53 50.78
AT3G53260.1 Thale cress cytosol 83.68 50.77
Bra003126.1-P Field mustard cytosol 82.3 50.64
PGSC0003DMT400060308 Potato cytosol, peroxisome, plastid 82.3 50.64
GSMUA_Achr1P09070_001 Banana peroxisome 75.86 50.46
Bra029831.1-P Field mustard cytosol 81.84 50.42
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 83.91 50.34
CDY08611 Canola cytosol 81.61 50.28
GSMUA_Achr5P18560_001 Banana cytosol, peroxisome, plastid 74.71 49.85
CDY00922 Canola cytosol 80.69 49.72
GSMUA_Achr5P03950_001 Banana cytosol, peroxisome, plastid 74.25 49.62
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 74.25 49.31
GSMUA_Achr2P00240_001 Banana peroxisome 73.79 49.16
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 78.85 48.51
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 78.62 48.37
Solyc03g078270.1.1 Tomato endoplasmic reticulum 16.09 48.28
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 79.08 48.25
TraesCS2D01G377600.1 Wheat plastid 78.62 48.24
TraesCS2D01G218700.1 Wheat peroxisome 78.39 48.23
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 78.39 48.16
TraesCS2B01G398000.2 Wheat plastid 78.85 48.11
TraesCS2D01G204700.1 Wheat peroxisome 78.16 48.09
GSMUA_Achr11P... Banana peroxisome 71.03 48.06
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 78.62 47.97
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 77.93 47.95
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 77.93 47.95
TraesCS1D01G039400.1 Wheat golgi 77.93 47.95
TraesCS2B01G224000.1 Wheat peroxisome 77.93 47.95
GSMUA_Achr8P18960_001 Banana cytosol, peroxisome, plastid 66.21 47.92
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 78.62 47.9
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 78.62 47.9
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 78.62 47.9
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 77.7 47.88
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 78.39 47.83
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 78.39 47.76
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 77.7 47.74
Zm00001d003015_P001 Maize peroxisome 78.39 47.69
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 78.16 47.69
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 78.16 47.69
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 78.16 47.69
OQU81984 Sorghum peroxisome 78.16 47.62
Os04t0518400-01 Rice extracellular, plasma membrane 78.16 47.62
Os02t0626600-00 Rice plasma membrane 78.16 47.55
TraesCS6B01G258500.1 Wheat extracellular, unclear 77.93 47.48
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 77.93 47.41
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 77.7 47.34
Zm00001d017276_P001 Maize peroxisome 76.55 47.3
Zm00001d017275_P001 Maize extracellular 78.16 47.29
Os02t0626400-01 Rice mitochondrion, plasma membrane 77.93 47.21
Os02t0627100-01 Rice plasma membrane 77.24 47.12
EES07175 Sorghum cytosol, peroxisome, plastid 77.7 47.08
Os05t0427400-00 Rice cytosol, peroxisome, plastid 77.47 47.07
EES05455 Sorghum cytosol, peroxisome, plastid 77.24 47.06
EES07176 Sorghum cytosol, peroxisome, plastid 77.24 47.06
EES07177 Sorghum cytosol, peroxisome, plastid 77.24 47.06
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 77.01 47.05
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 56.09 46.92
TraesCS6B01G258600.1 Wheat cytosol, peroxisome, plasma membrane 76.78 46.91
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 77.93 46.89
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 77.01 46.85
Zm00001d051163_P002 Maize peroxisome 77.24 46.8
TraesCS6D01G212500.1 Wheat peroxisome 76.32 46.63
AT5G04230.2 Thale cress peroxisome 74.71 46.56
Os04t0518100-01 Rice plasma membrane 75.63 46.53
Zm00001d051166_P001 Maize extracellular 76.32 46.37
TraesCS2B01G020100.1 Wheat peroxisome 71.95 45.96
Zm00001d017274_P001 Maize plasma membrane 73.1 45.23
Os02t0626100-01 Rice extracellular, plasma membrane 72.87 45.22
EES07174 Sorghum cytosol, peroxisome, plastid 72.87 45.03
TraesCS6B01G258400.2 Wheat cytosol, peroxisome, plastid 72.87 45.03
TraesCS6D01G212200.1 Wheat extracellular, golgi, unclear 72.87 45.03
Bra005221.1-P Field mustard peroxisome 38.39 45.01
EES12521 Sorghum cytosol 72.64 44.95
Zm00001d051161_P003 Maize plastid 72.41 44.81
HORVU2Hr1G089440.9 Barley plasma membrane 78.85 44.72
HORVU6Hr1G058820.2 Barley mitochondrion 72.87 44.71
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 71.72 44.7
CDY15917 Canola cytosol, peroxisome, plastid 71.72 44.7
CDX74991 Canola peroxisome 37.93 43.42
CDX91331 Canola peroxisome 37.93 43.42
Zm00001d033286_P001 Maize peroxisome 69.43 43.27
Os12t0520200-01 Rice plasma membrane 66.44 42.5
PGSC0003DMT400014003 Potato peroxisome 65.06 42.43
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 66.9 42.17
TraesCS3D01G016300.1 Wheat peroxisome 66.67 42.09
TraesCS3B01G053900.1 Wheat peroxisome 66.44 41.94
CDX73567 Canola cytosol 47.82 41.94
CDX78161 Canola cytosol 47.82 41.94
EER93773 Sorghum peroxisome 67.82 41.61
CDX67566 Canola cytosol 46.44 41.14
TraesCS5B01G468400.1 Wheat peroxisome 51.95 40.94
TraesCS3D01G016500.1 Wheat peroxisome 64.37 40.64
Zm00001d003016_P001 Maize plastid 73.33 40.43
Bra039777.1-P Field mustard peroxisome 46.67 39.8
CDY66761 Canola cytosol, peroxisome, plastid 47.36 39.69
CDX76219 Canola cytosol 47.36 39.46
GSMUA_Achr9P15990_001 Banana peroxisome 61.84 38.26
Os12t0461300-00 Rice plastid 21.84 37.55
HORVU2Hr1G089540.1 Barley peroxisome 37.7 34.97
Zm00001d029015_P001 Maize peroxisome 30.34 33.17
Os08t0308300-00 Rice plastid 13.33 30.85
CDY13306 Canola peroxisome 12.64 26.19
Bra028793.1-P Field mustard peroxisome 14.94 22.11
Zm00001d027249_P001 Maize peroxisome 11.26 21.97
Zm00001d053619_P001 Maize mitochondrion 19.31 19.86
Zm00001d020933_P001 Maize mitochondrion 8.51 17.54
CDY61769 Canola peroxisome 9.89 17.0
HORVU2Hr1G062750.1 Barley mitochondrion 2.76 6.52
CDY18463 Canola peroxisome 1.38 2.28
Zm00001d051164_P001 Maize peroxisome 0.69 1.91
Solyc03g071870.1.1 Tomato peroxisome 0.23 0.58
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.274.20Gene3D:1.20.200.10EntrezGene:102596891MapMan:9.2.1.1.1
InterPro:Aromatic_LyaseGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0006559GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016829GO:GO:0016841InterPro:IPR023144InterPro:L-Aspartase-likeUniProt:M1D3Y2PFAM:PF00221
EnsemblPlantsGene:PGSC0003DMG400031457PGSC:PGSC0003DMG400031457EnsemblPlants:PGSC0003DMT400080765PANTHER:PTHR10362PANTHER:PTHR10362:SF32InterPro:Phe_NH3-lyase
InterPro:Phe_NH3-lyase_shielding_dom_sfSUPFAM:SSF48557TIGRFAMs:TIGR01226UniParc:UPI000294FB77RefSeq:XP_006367534.2:
Description
Phenylalanine ammonia-lyase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400031457]
Coordinates
chr3:-:17248040..17249552
Molecular Weight (calculated)
48345.1 Da
IEP (calculated)
6.146
GRAVY (calculated)
-0.262
Length
435 amino acids
Sequence
(BLAST)
001: MSEVLSAIFA EVMNGKPEFT DYLTHKLKHH PGQIEAAAIM EHILDGSSYV KAAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRAAT KMIEREINSV
101: NDNPLIDVSR NKAIHGGNFQ GTPIGVSMDN TRLALASIGK LMFAQFSELV NDYYNNGLPS NLTAGRNPSL DYGFKGAEIA MASYCSELQF LANPVTNHVQ
201: SAEQHNQDVN SLGLISARKT AEAVDILKLM SSTYLVALCQ AIDLRHLEEN LKSVVKNTVS QVAKRTLTIG AIGELHPARF CEKELLRVVD REYLFTYADD
301: PCSSTYPLMQ KLRQVLVDHA MKNGESEKNI NSSIFQKIGA FEDELNAVLP KEVESARALL ESGNPSIPNR ITECRSYPLY RLVRQELGTE LLTGEKVRSP
401: GEEIEKVFTA MCNGQIIDPL LECLKSWNGA PLPIC
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.