Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G204700.1 | Wheat | peroxisome | 91.42 | 93.49 |
| TraesCS2A01G212600.1 | Wheat | cytosol | 34.16 | 93.21 |
| TraesCS2B01G224300.1 | Wheat | cytosol, peroxisome, plastid | 90.73 | 92.92 |
| TraesCS2D01G218700.1 | Wheat | peroxisome | 90.59 | 92.64 |
| TraesCS2A01G196700.1 | Wheat | peroxisome | 90.46 | 92.5 |
| TraesCS2A01G212900.1 | Wheat | cytosol, peroxisome, plastid | 90.18 | 92.22 |
| HORVU2Hr1G038120.1 | Barley | cytosol, peroxisome, plastid | 90.18 | 92.22 |
| HORVU1Hr1G022060.1 | Barley | cytosol, peroxisome, plastid | 89.9 | 91.94 |
| Os04t0518400-01 | Rice | extracellular, plasma membrane | 85.06 | 86.13 |
| HORVU2Hr1G089540.1 | Barley | peroxisome | 54.77 | 84.44 |
| OQU81984 | Sorghum | peroxisome | 82.71 | 83.75 |
| Zm00001d003015_P001 | Maize | peroxisome | 81.47 | 82.38 |
| HORVU2Hr1G089440.9 | Barley | plasma membrane | 86.72 | 81.75 |
| HORVU6Hr1G058840.1 | Barley | cytosol, peroxisome, plasma membrane | 80.5 | 81.74 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 11.48 | 81.37 |
| HORVU0Hr1G016330.1 | Barley | cytosol, peroxisome, plastid | 79.81 | 80.7 |
| CDY18464 | Canola | peroxisome | 46.06 | 78.72 |
| PGSC0003DMT400080765 | Potato | peroxisome | 46.89 | 77.93 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 49.52 | 76.82 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 41.49 | 76.73 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 23.93 | 75.55 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 26.0 | 72.87 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 36.24 | 71.78 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 67.36 | 70.89 |
| Solyc10g086180.1.1 | Tomato | extracellular | 69.57 | 70.75 |
| Bra003126.1-P | Field mustard | cytosol | 68.88 | 70.44 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 69.16 | 70.32 |
| CDX99621 | Canola | mitochondrion | 52.97 | 70.02 |
| CDX67566 | Canola | cytosol | 47.44 | 69.86 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 69.16 | 69.73 |
| AT3G10340.1 | Thale cress | peroxisome | 68.19 | 69.73 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 66.39 | 69.67 |
| CDX78161 | Canola | cytosol | 47.72 | 69.56 |
| CDX73567 | Canola | cytosol | 47.72 | 69.56 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 69.43 | 69.53 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 69.29 | 69.49 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 69.29 | 69.49 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 69.29 | 69.49 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 69.29 | 69.39 |
| AT3G53260.1 | Thale cress | cytosol | 68.74 | 69.32 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 68.74 | 69.12 |
| CDY08611 | Canola | cytosol | 67.36 | 68.98 |
| Bra029831.1-P | Field mustard | cytosol | 67.22 | 68.84 |
| Bra006985.1-P | Field mustard | cytosol | 67.08 | 68.7 |
| CDY00922 | Canola | cytosol | 66.81 | 68.41 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 49.1 | 68.4 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 68.46 | 68.28 |
| Solyc09g007890.1.1 | Tomato | plastid | 67.5 | 67.87 |
| CDX76219 | Canola | cytosol | 48.82 | 67.62 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 13.55 | 67.59 |
| HORVU3Hr1G005330.2 | Barley | cytosol, peroxisome, plasma membrane | 63.07 | 66.09 |
| HORVU6Hr1G058820.2 | Barley | mitochondrion | 64.73 | 66.01 |
| Bra039777.1-P | Field mustard | peroxisome | 45.78 | 64.9 |
| PGSC0003DMT400055529 | Potato | cytosol | 14.94 | 64.67 |
| AT5G04230.2 | Thale cress | peroxisome | 62.1 | 64.33 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 60.58 | 62.75 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 60.44 | 62.61 |
| Bra005221.1-P | Field mustard | peroxisome | 29.32 | 57.14 |
| CDX91331 | Canola | peroxisome | 29.18 | 55.53 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 53.94 | 55.48 |
| CDX74991 | Canola | peroxisome | 29.05 | 55.26 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 49.79 | 54.14 |
| CDY18463 | Canola | peroxisome | 18.4 | 50.57 |
| CDY13306 | Canola | peroxisome | 14.66 | 50.48 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 12.03 | 50.0 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 57.54 | 46.48 |
| HORVU2Hr1G062750.1 | Barley | mitochondrion | 11.76 | 46.2 |
| Bra028793.1-P | Field mustard | peroxisome | 17.43 | 42.86 |
| CDY61769 | Canola | peroxisome | 14.66 | 41.9 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 9.54 | 40.12 |
| Solyc10g011930.1.1 | Tomato | cytosol | 5.81 | 33.07 |
| Solyc10g011920.1.1 | Tomato | cytosol | 5.81 | 33.07 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 9.54 | 19.44 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| UniProt:A0A287HQX7 | InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009698 | GO:GO:0009800 | GO:GO:0009987 | GO:GO:0016829 |
| GO:GO:0016841 | GO:GO:0019748 | GO:GO:0045548 | EnsemblPlantsGene:HORVU2Hr1G038140 | EnsemblPlants:HORVU2Hr1G038140.1 | InterPro:IPR023144 |
| InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 | ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF9 |
| InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf | SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | UniParc:UPI000B47440F |
| SEG:seg | : | : | : | : | : |
Description
Phenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:A0A287HQX7]
Coordinates
chrchr2H:+:177374428..177376948
Molecular Weight (calculated)
77905.9 Da
IEP (calculated)
6.552
GRAVY (calculated)
-0.052
Length
723 amino acids
Sequence
(BLAST)
(BLAST)
001: KTTPHLPCCI QLFSLTAAPQ NRHIDNQPLV STRALLSHKA RTAPSRLQDP LLIKPMAANG NDGLCVAEPR SADPLNWGKA AAELSGSHLD AVKRMVEEYR
101: RPVVVMEGAS LTIAQVAAVA AADGARVELX KEGGALQREL IRFLNAGAFG TGTDGHVLPA ATTRAAMLVR VNTLLQGYSG IRFEILETIA TLLNANVTPC
201: LPLRGTITAS GDLVPLSYIA GLVTGHPNAV AVAPDGTKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASIVL FEANVLGVLA EVLSAVFCEV
301: MNGKPEYTDH LTHKLKHHPG QIEAAAIMEH ILEGSSYMML AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREINSVND NPLIDVSRGK
401: AIHGGNFQGT PIGVSMDNTR LAIAAIGKLM FAQFSELVND FYNNGLPSNL SGGRNPSLDY GFKGAEIAMA SYCSELQFLG NPVTNHVQSA EQHNQDVNSL
501: GLISARKTAE AIDILKLMSS TFLVALCQAI DLRHLEENVK NAVKSCVTRV ARKTLITNDM GGLHNARFCE KDLLQTIDRE AVFAYADDPC SANYPLMKKM
601: RAVLVEHALA NGEAERNVET SVFAKVAKFE QELCATLPQE VEAARGAVEN GTAAEPNRIV DCRSYPLYRF VREELGTVYL TGEKTRSPGE EVDKVFVAMN
701: QGKHIDALLE CLKEWNGEPL PLC
101: RPVVVMEGAS LTIAQVAAVA AADGARVELX KEGGALQREL IRFLNAGAFG TGTDGHVLPA ATTRAAMLVR VNTLLQGYSG IRFEILETIA TLLNANVTPC
201: LPLRGTITAS GDLVPLSYIA GLVTGHPNAV AVAPDGTKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASIVL FEANVLGVLA EVLSAVFCEV
301: MNGKPEYTDH LTHKLKHHPG QIEAAAIMEH ILEGSSYMML AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREINSVND NPLIDVSRGK
401: AIHGGNFQGT PIGVSMDNTR LAIAAIGKLM FAQFSELVND FYNNGLPSNL SGGRNPSLDY GFKGAEIAMA SYCSELQFLG NPVTNHVQSA EQHNQDVNSL
501: GLISARKTAE AIDILKLMSS TFLVALCQAI DLRHLEENVK NAVKSCVTRV ARKTLITNDM GGLHNARFCE KDLLQTIDRE AVFAYADDPC SANYPLMKKM
601: RAVLVEHALA NGEAERNVET SVFAKVAKFE QELCATLPQE VEAARGAVEN GTAAEPNRIV DCRSYPLYRF VREELGTVYL TGEKTRSPGE EVDKVFVAMN
701: QGKHIDALLE CLKEWNGEPL PLC
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.