Factsheet for Solyc03g078280.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
vacuole 1
peroxisome 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g036470.1.1
Solyc03g036480.1.1
Solyc03g042560.1.1
Solyc03g071860.2.1
Solyc03g071870.1.1
Solyc03g078270.1.1
Solyc03g078280.1.1
Solyc03g120320.1.1
Solyc03g120330.1.1
Solyc06g066770.1.1
Solyc09g007890.1.1
Solyc09g007900.2.1
Solyc09g007910.2.1
Solyc09g007920.2.1
Solyc10g011920.1.1
Solyc10g011930.1.1
Solyc10g086180.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37040.1	Solyc03g036470.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g036480.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g042560.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g071860.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g071870.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g078270.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g078280.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007890.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007900.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007910.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007920.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g011920.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g011930.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g086180.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g036470.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g036480.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g042560.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g071860.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g071870.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g078270.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g078280.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007890.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007900.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007910.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007920.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g011920.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g011930.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g086180.1.1	AT3G10340.1	21798944
AT3G10340.1	Solyc03g120320.1.1	AT1G15670.1	21798944
AT3G10340.1	Solyc03g120330.1.1	AT1G15670.1	21798944
AT3G10340.1	Solyc06g066770.1.1	AT1G15670.1	21798944
AT3G53260.1	Solyc03g036470.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g036480.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g042560.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g071860.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g071870.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g078270.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g078280.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007890.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007900.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007910.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007920.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g011920.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g011930.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g086180.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g036470.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g036480.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g042560.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g071860.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g071870.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g078270.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g078280.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007890.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007900.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007910.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007920.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g011920.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g011930.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g086180.1.1	AT3G53260.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g071860.2.1	Tomato	endoplasmic reticulum	84.11	59.45
Solyc03g036480.1.1	Tomato	peroxisome	22.09	55.88
PGSC0003DMT400080765	Potato	peroxisome	91.47	54.25
Solyc03g042560.1.1	Tomato	peroxisome	87.98	48.71
CDY18464	Canola	peroxisome	77.52	47.28
TraesCS2B01G398300.2	Wheat	peroxisome	62.79	44.02
Solyc09g007910.2.1	Tomato	extracellular, nucleus	88.76	31.76
Solyc09g007920.2.1	Tomato	extracellular, nucleus	87.98	31.48
CDX99621	Canola	mitochondrion	66.67	31.44
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	87.6	31.35
Bra005221.1-P	Field mustard	peroxisome	44.96	31.27
Solyc09g007890.1.1	Tomato	plastid	86.43	31.02
TraesCS1D01G039300.1	Wheat	mitochondrion	62.79	30.74
CDX74991	Canola	peroxisome	44.19	30.0
CDX91331	Canola	peroxisome	44.19	30.0
Solyc10g086180.1.1	Tomato	extracellular	82.17	29.82
TraesCS3B01G027800.1	Wheat	mitochondrion	62.4	29.6
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	78.68	29.55
Bra003126.1-P	Field mustard	cytosol	77.91	28.43
KRG91925	Soybean	cytosol, peroxisome, plastid	78.68	28.31
Os08t0308300-00	Rice	plastid	20.54	28.19
Bra006985.1-P	Field mustard	cytosol	77.13	28.19
TraesCS2D01G204400.1	Wheat	peroxisome	72.87	28.14
AT3G10340.1	Thale cress	peroxisome	76.74	28.01
AT3G53260.1	Thale cress	cytosol	77.52	27.89
VIT_13s0019g04460.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	77.91	27.8
Bra029831.1-P	Field mustard	cytosol	75.97	27.76
CDY08611	Canola	cytosol	75.97	27.76
Bra017210.1-P	Field mustard	cytosol, peroxisome, plastid	77.52	27.7
AT2G37040.1	Thale cress	cytosol, peroxisome, plastid	77.52	27.59
Solyc05g056170.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	75.58	27.5
CDY00922	Canola	cytosol	74.42	27.2
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	74.03	27.02
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	74.03	26.79
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	73.26	26.77
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	74.03	26.75
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	74.03	26.75
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	73.26	26.73
TraesCS2D01G204700.1	Wheat	peroxisome	73.26	26.73
TraesCS2D01G218700.1	Wheat	peroxisome	73.26	26.73
TraesCS2D01G377600.1	Wheat	plastid	73.26	26.66
TraesCS2B01G398000.2	Wheat	plastid	73.64	26.65
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	73.64	26.65
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	73.64	26.65
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	72.87	26.59
TraesCS1D01G039400.1	Wheat	golgi	72.87	26.59
TraesCS2B01G224000.1	Wheat	peroxisome	72.87	26.59
Zm00001d003015_P001	Maize	peroxisome	73.64	26.57
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	73.26	26.51
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	73.26	26.47
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	73.26	26.47
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	72.48	26.45
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	72.48	26.41
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	72.48	26.41
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	72.87	26.37
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	72.87	26.37
Os04t0518400-01	Rice	extracellular, plasma membrane	72.87	26.33
Os04t0518100-01	Rice	plasma membrane	72.09	26.31
OQU81984	Sorghum	peroxisome	72.48	26.19
EES07175	Sorghum	cytosol, peroxisome, plastid	72.87	26.18
Os02t0626400-01	Rice	mitochondrion, plasma membrane	72.87	26.18
Zm00001d051163_P002	Maize	peroxisome	72.87	26.18
Zm00001d017275_P001	Maize	extracellular	72.87	26.15
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	72.87	26.0
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	70.93	25.99
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	70.93	25.99
AT5G04230.2	Thale cress	peroxisome	70.16	25.93
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	71.32	25.84
GSMUA_Achr1P09070_001	Banana	peroxisome	65.5	25.84
HORVU6Hr1G058820.2	Barley	mitochondrion	70.93	25.81
GSMUA_Achr5P03950_001	Banana	cytosol, peroxisome, plastid	65.12	25.81
TraesCS6B01G258500.1	Wheat	extracellular, unclear	71.32	25.77
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	71.32	25.77
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	71.32	25.73
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	70.93	25.7
Os02t0626600-00	Rice	plasma membrane	70.93	25.59
TraesCS6D01G212500.1	Wheat	peroxisome	70.54	25.56
GSMUA_Achr5P18560_001	Banana	cytosol, peroxisome, plastid	64.34	25.46
GSMUA_Achr2P00240_001	Banana	peroxisome	64.34	25.42
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	70.54	25.42
Os02t0626100-01	Rice	extracellular, plasma membrane	68.99	25.39
Os02t0627100-01	Rice	plasma membrane	70.16	25.39
EES05455	Sorghum	cytosol, peroxisome, plastid	70.16	25.35
EES07176	Sorghum	cytosol, peroxisome, plastid	70.16	25.35
EES07177	Sorghum	cytosol, peroxisome, plastid	70.16	25.35
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	64.34	25.34
Zm00001d017276_P001	Maize	peroxisome	68.99	25.28
GSMUA_Achr11P...	Banana	peroxisome	62.79	25.19
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	69.77	25.17
EES07174	Sorghum	cytosol, peroxisome, plastid	68.6	25.14
EES12521	Sorghum	cytosol	68.22	25.04
Zm00001d051166_P001	Maize	extracellular	69.38	25.0
TraesCS2B01G020100.1	Wheat	peroxisome	65.89	24.96
HORVU2Hr1G089440.9	Barley	plasma membrane	74.03	24.9
Zm00001d017274_P001	Maize	plasma membrane	67.83	24.89
Zm00001d051161_P003	Maize	plastid	67.83	24.89
Zm00001d033286_P001	Maize	peroxisome	67.05	24.79
Bra030322.1-P	Field mustard	cytosol, peroxisome, plastid	66.67	24.64
CDY15917	Canola	cytosol, peroxisome, plastid	66.28	24.5
GSMUA_Achr8P18960_001	Banana	cytosol, peroxisome, plastid	56.98	24.46
Os12t0520200-01	Rice	plasma membrane	64.34	24.41
Os12t0461300-00	Rice	plastid	23.64	24.11
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	48.45	24.04
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	63.57	23.77
TraesCS3D01G016300.1	Wheat	peroxisome	63.18	23.66
EER93773	Sorghum	peroxisome	64.73	23.55
TraesCS3B01G053900.1	Wheat	peroxisome	62.79	23.51
TraesCS3D01G016500.1	Wheat	peroxisome	60.47	22.64
Zm00001d003016_P001	Maize	plastid	68.99	22.56
GSMUA_Achr9P15990_001	Banana	peroxisome	60.08	22.05
TraesCS5B01G468400.1	Wheat	peroxisome	43.8	20.47
CDY13306	Canola	peroxisome	11.63	14.29
CDX67566	Canola	cytosol	26.74	14.05
CDX73567	Canola	cytosol	26.74	13.91
CDX78161	Canola	cytosol	26.74	13.91
CDY66761	Canola	cytosol, peroxisome, plastid	26.74	13.29
Bra028793.1-P	Field mustard	peroxisome	15.12	13.27
CDX76219	Canola	cytosol	26.74	13.22
Bra039777.1-P	Field mustard	peroxisome	25.19	12.75
HORVU2Hr1G089540.1	Barley	peroxisome	21.32	11.73
Zm00001d029015_P001	Maize	peroxisome	15.5	10.05
CDY61769	Canola	peroxisome	7.36	7.51
Zm00001d053619_P001	Maize	mitochondrion	10.85	6.62
HORVU2Hr1G062750.1	Barley	mitochondrion	3.88	5.43
Zm00001d020933_P001	Maize	mitochondrion	2.33	2.84
Zm00001d051164_P001	Maize	peroxisome	0.78	1.27
CDY18463	Canola	peroxisome	1.16	1.14
Solyc03g036470.1.1	Tomato	mitochondrion	0.0	0.0
Solyc03g071870.1.1	Tomato	peroxisome	0.0	0.0
Solyc03g078270.1.1	Tomato	endoplasmic reticulum	0.0	0.0
Solyc10g011920.1.1	Tomato	cytosol	0.0	0.0
Solyc10g011930.1.1	Tomato	cytosol	0.0	0.0
Zm00001d027249_P001	Maize	peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc03g078280.1.1	EnsemblPlantsGene:Solyc03g078280.1	Gene3D:1.20.200.10	GO:GO:0003674	GO:GO:0003824	InterPro:Aromatic_Lyase
InterPro:L-Aspartase-like	PANTHER:PTHR10362	PANTHER:PTHR10362:SF32	PFAM:PF00221	SUPFAM:SSF48557	UniParc:UPI0002767DCE
UniProt:K4BHQ7	MapMan:50.4.3	:	:	:	:

Description

No Description!

Coordinates

chr3:+:50303844..50304747

Molecular Weight (calculated)

28783.5 Da

IEP (calculated)

6.250

GRAVY (calculated)

-0.238

Length

258 amino acids

Sequence
(BLAST)

001: MIEREINSVN NNPLIDVSRN KAIHGGNFQG TPIGVSMDNT ILTLNPSLDY GFKGAEIAMA SYCSELQFLA NPVTNHVQSA KQHNQDVNSL GLISARKEAE
101: AVDILKLMSS TYLVALCQAI DLRHLEENLK SVVKNTVSQV ILREGIASSR RQEYLFTYVD DPCSSTYPLM QKLRHVLVYH AMKNGESEKN VNSSIFQKIG
201: AFEDELNVVL PKEVETARVV LESGNPSIPN RITECRSYPL YRLVRQELGT ELLTGEKV

Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)

001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC

Arabidopsis Description

PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.