Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0520200-01 | Rice | plasma membrane | 88.4 | 90.74 |
| EER93773 | Sorghum | peroxisome | 90.11 | 88.72 |
| Zm00001d017275_P001 | Maize | extracellular | 77.94 | 75.66 |
| Zm00001d051163_P002 | Maize | peroxisome | 77.79 | 75.63 |
| Zm00001d017276_P001 | Maize | peroxisome | 76.07 | 75.43 |
| Zm00001d017279_P001 | Maize | cytosol, peroxisome, plastid | 76.79 | 74.97 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 10.89 | 74.51 |
| Zm00001d051166_P001 | Maize | extracellular | 76.36 | 74.44 |
| Zm00001d003015_P001 | Maize | peroxisome | 75.93 | 74.13 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 23.64 | 72.05 |
| Zm00001d029015_P001 | Maize | peroxisome | 40.26 | 70.6 |
| CDY18464 | Canola | peroxisome | 42.41 | 69.98 |
| PGSC0003DMT400080765 | Potato | peroxisome | 43.27 | 69.43 |
| CDX67566 | Canola | cytosol | 48.42 | 68.84 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 45.85 | 68.67 |
| Zm00001d051161_P003 | Maize | plastid | 68.91 | 68.42 |
| Zm00001d017274_P001 | Maize | plasma membrane | 68.91 | 68.42 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 38.25 | 68.29 |
| CDX78161 | Canola | cytosol | 47.85 | 67.34 |
| CDX73567 | Canola | cytosol | 47.71 | 67.14 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 68.34 | 67.09 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 24.79 | 67.05 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 49.86 | 67.05 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 65.9 | 66.96 |
| Solyc10g086180.1.1 | Tomato | extracellular | 68.19 | 66.95 |
| Zm00001d020933_P001 | Maize | mitochondrion | 20.2 | 66.82 |
| Bra003126.1-P | Field mustard | cytosol | 67.62 | 66.76 |
| CDX76219 | Canola | cytosol | 49.86 | 66.67 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 68.62 | 66.62 |
| AT3G10340.1 | Thale cress | peroxisome | 67.48 | 66.62 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 68.77 | 66.57 |
| CDY00922 | Canola | cytosol | 67.34 | 66.57 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 68.62 | 66.44 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 68.62 | 66.44 |
| Bra029831.1-P | Field mustard | cytosol | 67.19 | 66.43 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 65.47 | 66.33 |
| CDY08611 | Canola | cytosol | 67.05 | 66.29 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 68.48 | 66.2 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 67.77 | 65.97 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 68.19 | 65.93 |
| AT3G53260.1 | Thale cress | cytosol | 67.62 | 65.83 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 68.19 | 65.66 |
| Bra006985.1-P | Field mustard | cytosol | 65.33 | 64.59 |
| Zm00001d027249_P001 | Maize | peroxisome | 20.63 | 64.57 |
| Solyc09g007890.1.1 | Tomato | plastid | 66.48 | 64.53 |
| CDX99621 | Canola | mitochondrion | 50.57 | 64.53 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 33.67 | 64.38 |
| Bra039777.1-P | Field mustard | peroxisome | 46.85 | 64.12 |
| AT5G04230.2 | Thale cress | peroxisome | 63.18 | 63.18 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 13.04 | 62.76 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 61.6 | 61.6 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 61.32 | 61.32 |
| Zm00001d053619_P001 | Maize | mitochondrion | 37.11 | 61.23 |
| Zm00001d051164_P001 | Maize | peroxisome | 13.75 | 61.15 |
| Zm00001d003016_P001 | Maize | plastid | 68.19 | 60.33 |
| Bra005221.1-P | Field mustard | peroxisome | 30.37 | 57.14 |
| CDY18463 | Canola | peroxisome | 21.2 | 56.27 |
| CDY13306 | Canola | peroxisome | 16.76 | 55.71 |
| CDX74991 | Canola | peroxisome | 30.23 | 55.53 |
| CDX91331 | Canola | peroxisome | 30.23 | 55.53 |
| PGSC0003DMT400055529 | Potato | cytosol | 13.18 | 55.09 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 51.15 | 53.68 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 53.44 | 53.06 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 12.89 | 52.33 |
| CDY61769 | Canola | peroxisome | 17.34 | 47.83 |
| Bra028793.1-P | Field mustard | peroxisome | 20.06 | 47.62 |
| Solyc10g011930.1.1 | Tomato | cytosol | 8.45 | 46.46 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 58.88 | 45.92 |
| Solyc10g011920.1.1 | Tomato | cytosol | 8.17 | 44.88 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 10.46 | 41.95 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 12.89 | 25.35 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| UniProt:A0A1D6KXF9 | InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009698 | GO:GO:0009800 | GO:GO:0009987 | GO:GO:0016829 |
| GO:GO:0016841 | GO:GO:0019748 | GO:GO:0045548 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like |
| ProteinID:ONM07141.1 | PFAM:PF00221 | ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF20 | InterPro:Phe/His_NH3-lyase_AS |
| InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf | SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | UniParc:UPI0008456170 | EnsemblPlantsGene:Zm00001d033286 |
| EnsemblPlants:Zm00001d033286_P001 | EnsemblPlants:Zm00001d033286_T001 | SEG:seg | : | : | : |
Description
Phenylalanine ammonia-lyase 1
Coordinates
chr1:+:257622515..257624760
Molecular Weight (calculated)
75662.0 Da
IEP (calculated)
6.144
GRAVY (calculated)
-0.040
Length
698 amino acids
Sequence
(BLAST)
(BLAST)
001: MECETGLVDR PLNSSAPRTG DPLKWGKAAE GLTGSHLDEV KRMVEEYRVP LVKIDGAVLS VAKVAAVAGR VQVALDESAR PRLEASREWV FESTMNGTDT
101: YGVTTGFGGA CHRRTKEFAA LQKELIRYLN AGVFGASSSD GYTLPPEVTR AAMLVRINTL TQGYSGIRFE ILEAIAKLLN ANVTPCLPLR GSITASGDLV
201: PLSYIAGLIT GRKNSVAVAP DGTKVDAVEA FRIAGIEHGF FALQPKEGLA IVNGTAVGSG LAAIVLFEAN ILAVLAEVLS ALYCEVMAGN PEYTDHLIHA
301: LKHHPGQIEA AAIMEHILEG SSYMKLAKEQ GELDPLTKMK QDRYAIRTTP QWLGPQVEVI RFATKSIERE INSVNDNPII DVARRKALHG GNFQGTPVGV
401: SMDNTRLAVA AIGKLMFAQF SELVSSFYSN GLPSNLSGGR NPSLDYGFNG AEVAMASYCS ELQFLANPVT NHVQTAEQHN QSVNSLGLIS SRMTAEAVTI
501: LKLMSSTFLI ALCQAVDLRQ LEESIKAAVK KCVSHVAKKS QAIDDHDLLV AIDRVAVFTY AEDPCRPSYP LMQKLRAVLM EHALINGDSN TERPMETSIL
601: AKVAEFEKQL SAVLPDEVEA ARAAVESGTT PNRITECRSY PLYRFVREEL GAEYLTGEKT RSPGEEVDKV VIAMNQRKHI DPLLQCLSEW KGAPLPII
101: YGVTTGFGGA CHRRTKEFAA LQKELIRYLN AGVFGASSSD GYTLPPEVTR AAMLVRINTL TQGYSGIRFE ILEAIAKLLN ANVTPCLPLR GSITASGDLV
201: PLSYIAGLIT GRKNSVAVAP DGTKVDAVEA FRIAGIEHGF FALQPKEGLA IVNGTAVGSG LAAIVLFEAN ILAVLAEVLS ALYCEVMAGN PEYTDHLIHA
301: LKHHPGQIEA AAIMEHILEG SSYMKLAKEQ GELDPLTKMK QDRYAIRTTP QWLGPQVEVI RFATKSIERE INSVNDNPII DVARRKALHG GNFQGTPVGV
401: SMDNTRLAVA AIGKLMFAQF SELVSSFYSN GLPSNLSGGR NPSLDYGFNG AEVAMASYCS ELQFLANPVT NHVQTAEQHN QSVNSLGLIS SRMTAEAVTI
501: LKLMSSTFLI ALCQAVDLRQ LEESIKAAVK KCVSHVAKKS QAIDDHDLLV AIDRVAVFTY AEDPCRPSYP LMQKLRAVLM EHALINGDSN TERPMETSIL
601: AKVAEFEKQL SAVLPDEVEA ARAAVESGTT PNRITECRSY PLYRFVREEL GAEYLTGEKT RSPGEEVDKV VIAMNQRKHI DPLLQCLSEW KGAPLPII
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.