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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 3
  • plastid 1
  • peroxisome 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra005221.1-P
Bra017210.1-P
Bra029831.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 Bra005221.1-P AT2G37040.1 21798944
AT2G37040.1 Bra017210.1-P AT2G37040.1 21798944
AT2G37040.1 Bra029831.1-P AT3G10340.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74991 Canola peroxisome 99.19 96.84
CDX91331 Canola peroxisome 98.92 96.58
PGSC0003DMT400055529 Potato cytosol 32.61 72.46
Solyc10g011930.1.1 Tomato cytosol 21.29 62.2
Solyc10g011920.1.1 Tomato cytosol 20.75 60.63
Solyc03g071870.1.1 Tomato peroxisome 24.8 53.49
Zm00001d051164_P001 Maize peroxisome 22.37 52.87
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 95.69 49.17
Bra028793.1-P Field mustard peroxisome 38.54 48.64
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 94.34 48.28
VIT_11s0016g01660.t01 Wine grape peroxisome 22.64 48.28
HORVU2Hr1G062750.1 Barley mitochondrion 23.72 47.83
TraesCS2B01G398300.2 Wheat peroxisome 46.9 47.28
Bra003126.1-P Field mustard cytosol 88.41 46.39
Bra006985.1-P Field mustard cytosol 86.25 45.33
Solyc03g078280.1.1 Tomato peroxisome 31.27 44.96
PGSC0003DMT400055489 Potato mitochondrion 45.01 42.71
Os12t0461300-00 Rice plastid 27.49 40.32
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 76.55 39.94
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 73.05 39.45
Solyc09g007910.2.1 Tomato extracellular, nucleus 76.55 39.39
Solyc10g086180.1.1 Tomato extracellular 75.47 39.38
KRG91925 Soybean cytosol, peroxisome, plastid 76.01 39.33
Solyc09g007920.2.1 Tomato extracellular, nucleus 76.28 39.25
Bra029831.1-P Field mustard cytosol 74.66 39.24
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 76.01 39.11
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 76.01 39.06
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 74.93 38.66
PGSC0003DMT400080765 Potato peroxisome 45.01 38.39
Solyc09g007890.1.1 Tomato plastid 73.32 37.83
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 69.54 37.45
GSMUA_Achr1P09070_001 Banana peroxisome 64.96 36.85
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 63.34 35.88
GSMUA_Achr5P18560_001 Banana cytosol, peroxisome, plastid 62.53 35.58
TraesCS2A01G212600.1 Wheat cytosol 25.34 35.47
GSMUA_Achr2P00240_001 Banana peroxisome 62.26 35.38
GSMUA_Achr5P03950_001 Banana cytosol, peroxisome, plastid 61.99 35.33
Os08t0308300-00 Rice plastid 17.79 35.11
TraesCS2B01G224000.1 Wheat peroxisome 66.85 35.08
Zm00001d017276_P001 Maize peroxisome 66.31 34.94
Os02t0627100-01 Rice plasma membrane 67.12 34.92
TraesCS2B01G398000.2 Wheat plastid 67.12 34.92
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 67.12 34.92
TraesCS2D01G377600.1 Wheat plastid 66.58 34.84
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 66.31 34.79
TraesCS2A01G381100.1 Wheat plastid 66.85 34.78
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 66.85 34.78
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 66.85 34.78
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 66.85 34.78
Os05t0427400-00 Rice cytosol, peroxisome, plastid 67.12 34.78
Solyc03g042560.1.1 Tomato peroxisome 43.67 34.76
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 66.31 34.75
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 66.31 34.75
OQU81984 Sorghum peroxisome 66.85 34.73
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 66.04 34.65
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 66.04 34.65
TraesCS2D01G204700.1 Wheat peroxisome 66.04 34.65
TraesCS2A01G380800.1 Wheat cytosol, peroxisome, plastid 66.58 34.64
TraesCS2A01G381000.1 Wheat plastid 66.58 34.64
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 66.58 34.64
Os04t0518400-01 Rice extracellular, plasma membrane 66.58 34.59
Zm00001d003015_P001 Maize peroxisome 66.58 34.55
Os02t0626400-01 Rice mitochondrion, plasma membrane 66.85 34.54
TraesCS1D01G039400.1 Wheat golgi 65.77 34.51
TraesCS2A01G380900.1 Wheat cytosol, peroxisome, plastid 66.31 34.5
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 66.31 34.45
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 66.31 34.45
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 66.31 34.41
TraesCS2A01G196700.1 Wheat peroxisome 65.5 34.37
TraesCS2A01G212900.1 Wheat cytosol, peroxisome, plastid 65.5 34.37
TraesCS2D01G218700.1 Wheat peroxisome 65.5 34.37
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 65.5 34.37
TraesCS4A01G401300.1 Wheat cytosol, peroxisome, plastid 66.04 34.36
Zm00001d051166_P001 Maize extracellular 66.31 34.36
EES05455 Sorghum cytosol, peroxisome, plastid 66.04 34.31
EES07176 Sorghum cytosol, peroxisome, plastid 66.04 34.31
EES07177 Sorghum cytosol, peroxisome, plastid 66.04 34.31
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 66.04 34.31
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 66.04 34.31
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 65.23 34.28
TraesCS1A01G037700.1 Wheat cytosol, peroxisome, plastid 65.23 34.23
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 65.77 34.22
TraesCS1A01G037800.1 Wheat cytosol, peroxisome, plastid 65.5 34.03
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 65.23 33.99
Zm00001d017275_P001 Maize extracellular 65.5 33.8
TraesCS6B01G258600.1 Wheat cytosol, peroxisome, plasma membrane 64.69 33.71
Zm00001d051163_P002 Maize peroxisome 65.23 33.7
TraesCS6A01G222700.1 Wheat cytosol, peroxisome, plasma membrane 64.42 33.57
TraesCS2D01G204400.1 Wheat peroxisome 60.38 33.53
TraesCS6D01G212500.1 Wheat peroxisome 64.15 33.43
EES07175 Sorghum cytosol, peroxisome, plastid 64.42 33.29
Os04t0518100-01 Rice plasma membrane 63.34 33.24
TraesCS6B01G258500.1 Wheat extracellular, unclear 63.61 33.05
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 63.61 33.01
GSMUA_Achr11P... Banana peroxisome 57.14 32.97
TraesCS6A01G222800.1 Wheat cytosol, peroxisome, plastid 63.34 32.91
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 63.07 32.77
Solyc03g071860.2.1 Tomato endoplasmic reticulum 32.08 32.6
EES12521 Sorghum cytosol 61.73 32.57
Os02t0626100-01 Rice extracellular, plasma membrane 61.46 32.52
HORVU2Hr1G089440.9 Barley plasma membrane 67.12 32.46
TraesCS6B01G258400.2 Wheat cytosol, peroxisome, plastid 61.46 32.39
TraesCS6D01G212200.1 Wheat extracellular, golgi, unclear 61.46 32.39
Zm00001d017274_P001 Maize plasma membrane 61.19 32.29
Zm00001d051161_P003 Maize plastid 61.19 32.29
GSMUA_Achr8P18960_001 Banana cytosol, peroxisome, plastid 52.29 32.28
TraesCS6A01G222900.1 Wheat extracellular, golgi, unclear 61.19 32.24
TraesCS2B01G020100.1 Wheat peroxisome 59.03 32.16
EES07174 Sorghum cytosol, peroxisome, plastid 60.92 32.1
Zm00001d027249_P001 Maize peroxisome 19.14 31.84
Os02t0626600-00 Rice plasma membrane 60.11 31.19
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 58.49 31.09
TraesCS2A01G196400.1 Wheat mitochondrion, plastid 55.26 30.69
Zm00001d033286_P001 Maize peroxisome 57.14 30.37
TraesCS3B01G053900.1 Wheat peroxisome 54.99 29.61
TraesCS3D01G016300.1 Wheat peroxisome 54.72 29.46
TraesCS3D01G016500.1 Wheat peroxisome 54.72 29.46
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 57.14 29.32
TraesCS3A01G029200.1 Wheat peroxisome 54.45 29.32
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 54.45 29.28
Zm00001d003016_P001 Maize plastid 61.73 29.02
TraesCSU01G030700.1 Wheat peroxisome 53.1 29.01
Os12t0520200-01 Rice plasma membrane 53.1 28.97
EER93773 Sorghum peroxisome 54.45 28.49
Bra039777.1-P Field mustard peroxisome 37.74 27.45
TraesCS1D01G039300.1 Wheat mitochondrion 37.2 26.19
VIT_11s0016g01640.t01 Wine grape peroxisome 46.36 25.86
HORVU6Hr1G058820.2 Barley mitochondrion 49.06 25.67
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 32.61 23.27
TraesCS5B01G468400.1 Wheat peroxisome 34.5 23.19
TraesCS3B01G027800.1 Wheat mitochondrion 33.15 22.61
HORVU2Hr1G089540.1 Barley peroxisome 27.22 21.54
VIT_11s0016g01520.t01 Wine grape peroxisome 49.87 20.67
TraesCS1A01G094900.1 Wheat cytosol, peroxisome, plastid 27.49 20.48
VIT_11s0016g01510.t01 Wine grape peroxisome 19.41 20.28
GSMUA_Achr9P15990_001 Banana peroxisome 38.27 20.2
Zm00001d029015_P001 Maize peroxisome 19.41 18.09
Zm00001d053619_P001 Maize mitochondrion 19.95 17.49
Zm00001d020933_P001 Maize mitochondrion 8.09 14.22
Solyc03g036470.1.1 Tomato mitochondrion 6.47 10.48
Solyc03g078270.1.1 Tomato endoplasmic reticulum 0.81 2.07
Solyc03g036480.1.1 Tomato peroxisome 0.0 0.0
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.274.20Gene3D:1.10.275.10Gene3D:1.20.200.10MapMan:9.2.1.1.1
InterPro:Aromatic_LyaseEnsemblPlantsGene:Bra005221EnsemblPlants:Bra005221.1EnsemblPlants:Bra005221.1-PInterPro:Fumarase/histidase_NGO:GO:0003674
GO:GO:0003824InterPro:IPR023144InterPro:IPR024083InterPro:L-Aspartase-likeUniProt:M4CLY4PFAM:PF00221
PANTHER:PTHR10362PANTHER:PTHR10362:SF32InterPro:Phe_NH3-lyase_shielding_dom_sfSUPFAM:SSF48557UniParc:UPI0002547A93SEG:seg
Description
AT2G37040 (E=6e-113) pal1, ATPAL1 | pal1 (Phe ammonia lyase 1); phenylalanine ammonia-lyase
Coordinates
chrA05:+:4098130..4100879
Molecular Weight (calculated)
40482.7 Da
IEP (calculated)
6.321
GRAVY (calculated)
-0.140
Length
371 amino acids
Sequence
(BLAST)
001: MLCGAEIKNV TVAAADPLNW GAAAEQMKGS HLDEVKRMVM EFRKPVVNLG GETLTIGQVA AISTVGNGVK VELSETARAG VKASSDWVME SMGKGTDSYG
101: VTTGFGATSH RRTKNGVALQ KELIRFLNAG IFGSTKETCH TLPHSATRAA MLSRKTAEAV DILKLMSTTF LVAICQAVDL RHLEENLKQT VKNTVSQVAK
201: KVLTTGVNGE LHPSRFCEKD LLKVVDREQV YTYADDPCSA TYPLIQKLRQ VIVDHALVNG ESEKNAMTSI FHKIGAFEEE LKAVLPDEVE AARVAYDNGT
301: SAIPNRIKEC RSYPLYRFVR EELGTELLTG EKVTSPGEEF DKVFTAICEG KIIDPLMECL SEWNGAPIPI C
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.