Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G377200.1 | Wheat | cytosol, peroxisome, plastid | 99.3 | 99.3 |
| TraesCS2B01G398000.2 | Wheat | plastid | 98.6 | 98.6 |
| TraesCS2A01G381100.1 | Wheat | plastid | 97.9 | 97.9 |
| TraesCS2A01G381000.1 | Wheat | plastid | 97.9 | 97.9 |
| TraesCS2A01G380900.1 | Wheat | cytosol, peroxisome, plastid | 97.62 | 97.62 |
| TraesCS4A01G401300.1 | Wheat | cytosol, peroxisome, plastid | 95.23 | 95.23 |
| TraesCS1A01G037700.1 | Wheat | cytosol, peroxisome, plastid | 93.97 | 94.77 |
| TraesCS1A01G037800.1 | Wheat | cytosol, peroxisome, plastid | 94.81 | 94.68 |
| TraesCS1A01G094900.1 | Wheat | cytosol, peroxisome, plastid | 65.78 | 94.18 |
| TraesCS2A01G196700.1 | Wheat | peroxisome | 91.44 | 92.22 |
| TraesCS2A01G212900.1 | Wheat | cytosol, peroxisome, plastid | 91.3 | 92.08 |
| Os04t0518400-01 | Rice | extracellular, plasma membrane | 91.73 | 91.6 |
| HORVU2Hr1G089440.9 | Barley | plasma membrane | 97.76 | 90.87 |
| OQU81984 | Sorghum | peroxisome | 89.76 | 89.64 |
| TraesCS2A01G196400.1 | Wheat | mitochondrion, plastid | 83.03 | 88.62 |
| Zm00001d003015_P001 | Maize | peroxisome | 88.36 | 88.11 |
| TraesCS6A01G222700.1 | Wheat | cytosol, peroxisome, plasma membrane | 87.1 | 87.22 |
| TraesCS6A01G222800.1 | Wheat | cytosol, peroxisome, plastid | 86.26 | 86.13 |
| TraesCS2A01G212600.1 | Wheat | cytosol | 31.7 | 85.28 |
| CDY18464 | Canola | peroxisome | 46.56 | 78.49 |
| CDX67566 | Canola | cytosol | 52.59 | 76.37 |
| CDX73567 | Canola | cytosol | 53.02 | 76.21 |
| CDX78161 | Canola | cytosol | 53.02 | 76.21 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 54.84 | 75.34 |
| Bra003126.1-P | Field mustard | cytosol | 74.61 | 75.25 |
| AT3G10340.1 | Thale cress | peroxisome | 74.05 | 74.68 |
| CDX76219 | Canola | cytosol | 54.56 | 74.52 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 75.46 | 74.52 |
| AT3G53260.1 | Thale cress | cytosol | 74.75 | 74.34 |
| Bra029831.1-P | Field mustard | cytosol | 73.49 | 74.22 |
| CDY08611 | Canola | cytosol | 73.35 | 74.08 |
| CDY00922 | Canola | cytosol | 73.21 | 73.94 |
| Bra006985.1-P | Field mustard | cytosol | 73.07 | 73.8 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 74.89 | 73.66 |
| TraesCS6A01G222900.1 | Wheat | extracellular, golgi, unclear | 72.37 | 73.3 |
| Bra039777.1-P | Field mustard | peroxisome | 51.33 | 71.76 |
| CDX99621 | Canola | mitochondrion | 53.58 | 69.84 |
| AT5G04230.2 | Thale cress | peroxisome | 67.88 | 69.34 |
| TraesCS3A01G029200.1 | Wheat | peroxisome | 65.92 | 68.21 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 65.5 | 66.91 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 65.36 | 66.76 |
| Bra005221.1-P | Field mustard | peroxisome | 34.64 | 66.58 |
| CDY13306 | Canola | peroxisome | 19.07 | 64.76 |
| CDX91331 | Canola | peroxisome | 34.36 | 64.47 |
| CDX74991 | Canola | peroxisome | 34.36 | 64.47 |
| CDY18463 | Canola | peroxisome | 23.7 | 64.26 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 53.58 | 57.44 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 54.42 | 55.19 |
| CDY61769 | Canola | peroxisome | 18.93 | 53.36 |
| Bra028793.1-P | Field mustard | peroxisome | 21.88 | 53.06 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 61.57 | 49.05 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 11.92 | 48.85 |
| TraesCS5A01G558600.1 | Wheat | mitochondrion | 17.11 | 29.12 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 14.03 | 28.17 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
| ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF9 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
| SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | EnsemblPlantsGene:TraesCS2A01G380800 | EnsemblPlants:TraesCS2A01G380800.1 | TIGR:cd00332 | : |
Description
No Description!
Coordinates
chr2A:+:624359354..624362080
Molecular Weight (calculated)
77020.4 Da
IEP (calculated)
6.245
GRAVY (calculated)
-0.123
Length
713 amino acids
Sequence
(BLAST)
(BLAST)
001: MECENGHVAA NGDGLCVAQP ARADPLNWGK AAEELSGSHL DAVKRMVEEY RKPVVTMEGA SLTIAMVAAV AAGSDTRVEL DESARGRVKE SSDWVMNSMM
101: NGTDSYGVTT GFGATSHRRT KEGGALQREL IRFLNAGAFG TGNDGHVLPA AATRAAMLVR VNTLLQGYSG IRFEILETIA TLLNANVTPC LPLRGTITAS
201: GDLVPLSYIA GLVTGRPNSM ATAPDGTKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASMVL FEANILSLLA EVLSAVFCEV MNGKPEYTDH
301: LTHKLKHHPG QIEAAAIMEH ILEGSSYMML AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIGAATKS IEREINSVND NPLIDVSRGK AIHGGNFQGT
401: PIGVSMDNTR LAIAAIGKLM FAQFSELVND FYNNGLPSNL SGGRNPSLDY GFKGAEIAMT SYCSELQFLG NPVTNHVQSA EQHNQDVNSL GLISSRKTAE
501: AIDILKLMSS TFLVALCQAI DLRHLEENVK NAVKSCVKTV ARKTLSTNNN GHLHNARFCE KDLLLTIDRE AVFAYADDPC SANYPLMQKM RAVLVEHALA
601: NGEAERDVET SVFAKLAIFE QELRAVLPKE VEAARSAVEN GTATQQNRIA ECRSYPLYRF VRKELGTVYL TGEKTRSPGE EVDKVFVAMN QGKHIDALLE
701: CLKGWNGEPL PIC
101: NGTDSYGVTT GFGATSHRRT KEGGALQREL IRFLNAGAFG TGNDGHVLPA AATRAAMLVR VNTLLQGYSG IRFEILETIA TLLNANVTPC LPLRGTITAS
201: GDLVPLSYIA GLVTGRPNSM ATAPDGTKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASMVL FEANILSLLA EVLSAVFCEV MNGKPEYTDH
301: LTHKLKHHPG QIEAAAIMEH ILEGSSYMML AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIGAATKS IEREINSVND NPLIDVSRGK AIHGGNFQGT
401: PIGVSMDNTR LAIAAIGKLM FAQFSELVND FYNNGLPSNL SGGRNPSLDY GFKGAEIAMT SYCSELQFLG NPVTNHVQSA EQHNQDVNSL GLISSRKTAE
501: AIDILKLMSS TFLVALCQAI DLRHLEENVK NAVKSCVKTV ARKTLSTNNN GHLHNARFCE KDLLLTIDRE AVFAYADDPC SANYPLMQKM RAVLVEHALA
601: NGEAERDVET SVFAKLAIFE QELRAVLPKE VEAARSAVEN GTATQQNRIA ECRSYPLYRF VRKELGTVYL TGEKTRSPGE EVDKVFVAMN QGKHIDALLE
701: CLKGWNGEPL PIC
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.