Factsheet for TraesCS5A01G558600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 4
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G030600.1	Wheat	peroxisome	16.95	63.39
Solyc10g011920.1.1	Tomato	cytosol	10.74	35.43
Solyc10g011930.1.1	Tomato	cytosol	10.74	35.43
TraesCS1A01G094900.1	Wheat	cytosol, peroxisome, plastid	25.06	21.08
TraesCS3A01G029200.1	Wheat	peroxisome	31.03	18.87
TraesCS2A01G196400.1	Wheat	mitochondrion, plastid	29.36	18.41
TraesCS6A01G222900.1	Wheat	extracellular, golgi, unclear	29.83	17.76
TraesCS6A01G222700.1	Wheat	cytosol, peroxisome, plasma membrane	30.07	17.7
PGSC0003DMT400049886	Potato	nucleus, peroxisome, plastid	28.88	17.56
TraesCS2A01G196700.1	Wheat	peroxisome	29.59	17.54
TraesCS6A01G222800.1	Wheat	cytosol, peroxisome, plastid	29.83	17.51
TraesCS1A01G037700.1	Wheat	cytosol, peroxisome, plastid	29.36	17.4
TraesCS4A01G401300.1	Wheat	cytosol, peroxisome, plastid	29.59	17.39
TraesCS2A01G212900.1	Wheat	cytosol, peroxisome, plastid	29.12	17.26
TraesCS2A01G380800.1	Wheat	cytosol, peroxisome, plastid	29.12	17.11
TraesCS2A01G380900.1	Wheat	cytosol, peroxisome, plastid	29.12	17.11
TraesCS2A01G381000.1	Wheat	plastid	29.12	17.11
TraesCS2A01G381100.1	Wheat	plastid	29.12	17.11
TraesCS1A01G037800.1	Wheat	cytosol, peroxisome, plastid	29.12	17.09
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	26.49	16.16
VIT_13s0019g04460.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	27.68	16.04
KRG91925	Soybean	cytosol, peroxisome, plastid	26.49	15.48
TraesCS2A01G212600.1	Wheat	cytosol	6.44	10.19

Protein Annotations

EnsemblPlants:TraesCS5A01G558600.1	EnsemblPlantsGene:TraesCS5A01G558600	Gene3D:1.10.275.10	GO:GO:0003674	GO:GO:0003824	InterPro:Aromatic_Lyase
InterPro:Fumarase/histidase_N	InterPro:IPR024083	InterPro:L-Aspartase-like	PANTHER:PTHR10362	PANTHER:PTHR10362:SF11	PFAM:PF00221
SEG:seg	SUPFAM:SSF48557	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5A:+:709416470..709420264

Molecular Weight (calculated)

42142.1 Da

IEP (calculated)

7.504

GRAVY (calculated)

0.142

Length

419 amino acids

Sequence
(BLAST)

001: MVARFREPIV RILGAGLSVG QVAAVAHAKD AASVTVDEAR VRVRACSDWI IHSVASGGDI YGVTTGFGGT SHRPTKDGHG LQVELVRVIY SLLSAFSFVD
101: VTEACGDAVD VTAVCHRVDD PVDAGLDADA RLVDGDAGGV LGVCNGSHLT DAEAGPQDPD DRLTESRHHA LDLVEVAAVL ASSLSHPRAA TPKDGSGGAA
201: VPRLLPPPLA PPPAAAGQIR QGKALAVAGG GGFFLLPSDL GDMGWPVRRR RQAHVGPGGA VAVAPVGVVP RLGGVLAATA RNAVAACPWP RPGSDLGVGG
301: LRAAREDLRR SSPAPVGSLG ADGGGGAEAS GGCVPGLVSC LDSSGRRGVG QWPVLVAVAG VGGRGVVWSN SNCPAVRRLH GGSQALHAAK AGFSSASTRL
401: RSDCVDLCVI SSSSGLYFC

Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)

001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC

Arabidopsis Description

PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.