Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- peroxisome 2
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G204700.1 | Wheat | peroxisome | 99.1 | 93.64 |
TraesCS2B01G224000.1 | Wheat | peroxisome | 98.95 | 93.49 |
TraesCS2D01G218700.1 | Wheat | peroxisome | 98.65 | 93.21 |
HORVU2Hr1G038120.1 | Barley | cytosol, peroxisome, plastid | 98.5 | 93.07 |
TraesCS2A01G196400.1 | Wheat | mitochondrion, plastid | 92.96 | 92.96 |
TraesCS1D01G103500.1 | Wheat | cytosol, peroxisome, plastid | 97.75 | 92.23 |
TraesCS1D01G039300.1 | Wheat | mitochondrion | 72.31 | 91.65 |
TraesCS2D01G377200.1 | Wheat | cytosol, peroxisome, plastid | 93.26 | 87.38 |
TraesCS2D01G377600.1 | Wheat | plastid | 92.52 | 87.17 |
TraesCS2D01G377400.1 | Wheat | cytosol, peroxisome, plastid | 92.96 | 87.1 |
TraesCS2D01G377500.1 | Wheat | cytosol, peroxisome, plastid | 92.66 | 86.82 |
TraesCS1D01G039400.1 | Wheat | golgi | 91.47 | 86.42 |
TraesCS1D01G039500.1 | Wheat | cytosol, peroxisome, plastid | 92.37 | 86.41 |
Os04t0518400-01 | Rice | extracellular, plasma membrane | 92.07 | 86.13 |
OQU81984 | Sorghum | peroxisome | 90.42 | 84.59 |
Zm00001d003015_P001 | Maize | peroxisome | 89.22 | 83.36 |
TraesCS6D01G212500.1 | Wheat | peroxisome | 87.57 | 82.16 |
TraesCS6D01G212400.1 | Wheat | cytosol, peroxisome, plastid | 87.72 | 82.07 |
Solyc03g036480.1.1 | Tomato | peroxisome | 12.43 | 81.37 |
CDY18464 | Canola | peroxisome | 50.0 | 78.96 |
PGSC0003DMT400080765 | Potato | peroxisome | 50.9 | 78.16 |
Solyc03g042560.1.1 | Tomato | peroxisome | 53.74 | 77.04 |
PGSC0003DMT400055489 | Potato | mitochondrion | 45.06 | 76.98 |
Solyc03g036470.1.1 | Tomato | mitochondrion | 25.9 | 75.55 |
KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 75.6 | 73.51 |
Solyc03g078280.1.1 | Tomato | peroxisome | 28.14 | 72.87 |
Solyc10g086180.1.1 | Tomato | extracellular | 77.25 | 72.57 |
PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 77.1 | 72.43 |
CDX67566 | Canola | cytosol | 53.14 | 72.3 |
Bra003126.1-P | Field mustard | cytosol | 76.2 | 71.99 |
CDX73567 | Canola | cytosol | 53.44 | 71.98 |
PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 74.1 | 71.84 |
CDX78161 | Canola | cytosol | 53.29 | 71.77 |
AT3G10340.1 | Thale cress | peroxisome | 75.9 | 71.71 |
Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 39.07 | 71.51 |
TraesCS6D01G212200.1 | Wheat | extracellular, golgi, unclear | 75.15 | 71.31 |
Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 76.95 | 71.29 |
Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 76.95 | 71.29 |
Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 76.95 | 71.29 |
AT3G53260.1 | Thale cress | cytosol | 76.5 | 71.27 |
PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 76.95 | 71.19 |
Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 76.8 | 71.05 |
CDY08611 | Canola | cytosol | 74.85 | 70.82 |
PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 76.2 | 70.79 |
KRG91925 | Soybean | cytosol, peroxisome, plastid | 75.9 | 70.71 |
Bra029831.1-P | Field mustard | cytosol | 74.7 | 70.68 |
Bra006985.1-P | Field mustard | cytosol | 74.55 | 70.54 |
CDY66761 | Canola | cytosol, peroxisome, plastid | 54.79 | 70.52 |
CDY00922 | Canola | cytosol | 74.25 | 70.25 |
CDX76219 | Canola | cytosol | 54.64 | 69.92 |
CDX99621 | Canola | mitochondrion | 57.19 | 69.84 |
AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 75.75 | 69.79 |
Solyc09g007890.1.1 | Tomato | plastid | 74.7 | 69.4 |
TraesCS3D01G016300.1 | Wheat | peroxisome | 69.31 | 67.2 |
Bra039777.1-P | Field mustard | peroxisome | 51.2 | 67.06 |
Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 14.52 | 66.9 |
AT5G04230.2 | Thale cress | peroxisome | 69.31 | 66.33 |
TraesCS3D01G016500.1 | Wheat | peroxisome | 67.52 | 65.46 |
PGSC0003DMT400055529 | Potato | cytosol | 16.17 | 64.67 |
CDY15917 | Canola | cytosol, peroxisome, plastid | 67.07 | 64.18 |
Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 66.92 | 64.04 |
Bra005221.1-P | Field mustard | peroxisome | 33.53 | 60.38 |
CDX91331 | Canola | peroxisome | 33.38 | 58.68 |
CDX74991 | Canola | peroxisome | 33.23 | 58.42 |
CDY13306 | Canola | peroxisome | 17.66 | 56.19 |
VIT_11s0016g01640.t01 | Wine grape | peroxisome | 55.84 | 56.09 |
CDY18463 | Canola | peroxisome | 21.56 | 54.75 |
GSMUA_Achr9P15990_001 | Banana | peroxisome | 56.59 | 53.77 |
VIT_11s0016g01660.t01 | Wine grape | peroxisome | 13.17 | 50.57 |
Bra028793.1-P | Field mustard | peroxisome | 21.26 | 48.3 |
CDY61769 | Canola | peroxisome | 18.26 | 48.22 |
VIT_11s0016g01520.t01 | Wine grape | peroxisome | 64.22 | 47.93 |
Solyc03g071870.1.1 | Tomato | peroxisome | 11.68 | 45.35 |
Solyc10g011930.1.1 | Tomato | cytosol | 7.49 | 39.37 |
Solyc10g011920.1.1 | Tomato | cytosol | 7.49 | 39.37 |
VIT_11s0016g01510.t01 | Wine grape | peroxisome | 12.57 | 23.66 |
Protein Annotations
KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF9 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | EnsemblPlantsGene:TraesCS2D01G204400 | EnsemblPlants:TraesCS2D01G204400.1 | TIGR:cd00332 | SEG:seg |
Description
No Description!
Coordinates
chr2D:+:156591937..156594759
Molecular Weight (calculated)
72190.7 Da
IEP (calculated)
6.213
GRAVY (calculated)
-0.068
Length
668 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEEYRRPVV VMEGASLTIA QVAAVAAADG ARVELDESAR GRVKESSDWV MTSMANGTDS YGVTTGFGAT SHRRTKEGGA LQRELIRFLN AGAFGTGSDG
101: HVLPAATTRA AMLVRVNTLL QGYSGIRFEI LETIATLLNA NVTPCLPLRG TITASGDLVP LSYIAGLVTG RPNAVAVAPD GTKVNAAEAF KIAGIQHGFF
201: ELQPKEGLAM VNGTAVGSGL ASIVLFEANI FGVLAEVLSA VFCEVMNGKP EYTDHLTHKL KHHPGQIEAA AIMEHILEGS SYMMLAKKLG ELDPLMKPKQ
301: DRYALRTSPQ WLGPQIEVIR AATKSIEREI NSVNDNPLID VSRGKAIHGG NFQGTPIGVS MDNTRLAIAA IGKLMFAQFS ELVNDFYNNG LPSNLSGGRN
401: PSLDYGFKGA EIAMASYCSE LQFLGNPVTN HVQSAEQHNQ DVNSLGLISA RKTAEAIDIL KLMSSTFLVA LCQAIDLRHL EENVKNAVKN CVTRVARKTL
501: ITNDMGGLHN ARFCEKDLLQ TIDREAVFAY ADDPCSANYP LMKKMRAVLV EHALANGEAE HNVETSVFAK VAKFEQELCA TLPQKVEAAR GAVENGTAAE
601: PNRIVDCRSY PLYRFVREEL GTVYLTGEKT RSPGEEVDKV FVAMNQGKHI DALLECLKEW NGEPLPIC
101: HVLPAATTRA AMLVRVNTLL QGYSGIRFEI LETIATLLNA NVTPCLPLRG TITASGDLVP LSYIAGLVTG RPNAVAVAPD GTKVNAAEAF KIAGIQHGFF
201: ELQPKEGLAM VNGTAVGSGL ASIVLFEANI FGVLAEVLSA VFCEVMNGKP EYTDHLTHKL KHHPGQIEAA AIMEHILEGS SYMMLAKKLG ELDPLMKPKQ
301: DRYALRTSPQ WLGPQIEVIR AATKSIEREI NSVNDNPLID VSRGKAIHGG NFQGTPIGVS MDNTRLAIAA IGKLMFAQFS ELVNDFYNNG LPSNLSGGRN
401: PSLDYGFKGA EIAMASYCSE LQFLGNPVTN HVQSAEQHNQ DVNSLGLISA RKTAEAIDIL KLMSSTFLVA LCQAIDLRHL EENVKNAVKN CVTRVARKTL
501: ITNDMGGLHN ARFCEKDLLQ TIDREAVFAY ADDPCSANYP LMKKMRAVLV EHALANGEAE HNVETSVFAK VAKFEQELCA TLPQKVEAAR GAVENGTAAE
601: PNRIVDCRSY PLYRFVREEL GTVYLTGEKT RSPGEEVDKV FVAMNQGKHI DALLECLKEW NGEPLPIC
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.