Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G048200.1 | Wheat | cytosol, peroxisome, plastid | 96.77 | 96.64 |
| TraesCS1A01G037700.1 | Wheat | cytosol, peroxisome, plastid | 95.79 | 96.61 |
| TraesCS1B01G048100.1 | Wheat | cytosol, peroxisome, plastid | 96.63 | 96.5 |
| TraesCS1B01G048400.2 | Wheat | cytosol, peroxisome, plastid | 95.37 | 96.18 |
| TraesCS5B01G468300.1 | Wheat | cytosol, peroxisome, plastid | 95.23 | 96.04 |
| TraesCS2B01G398200.1 | Wheat | cytosol, peroxisome, plastid | 94.39 | 94.39 |
| TraesCS2B01G398000.2 | Wheat | plastid | 94.25 | 94.25 |
| TraesCS1B01G048500.1 | Wheat | cytosol, peroxisome, plastid | 94.11 | 93.98 |
| TraesCS2B01G398400.1 | Wheat | cytosol, peroxisome, plastid | 93.69 | 93.69 |
| TraesCS5B01G468400.1 | Wheat | peroxisome | 72.37 | 93.48 |
| TraesCS2B01G398100.1 | Wheat | cytosol, peroxisome, plastid | 67.88 | 93.08 |
| TraesCS2B01G398300.2 | Wheat | peroxisome | 47.12 | 91.3 |
| TraesCS1B01G122800.1 | Wheat | cytosol, peroxisome, plastid | 90.18 | 90.82 |
| TraesCS2B01G224000.1 | Wheat | peroxisome | 90.04 | 90.81 |
| TraesCS2B01G224300.1 | Wheat | cytosol, peroxisome, plastid | 89.48 | 90.37 |
| Os04t0518400-01 | Rice | extracellular, plasma membrane | 90.04 | 89.92 |
| TraesCS2B01G020100.1 | Wheat | peroxisome | 84.43 | 88.4 |
| OQU81984 | Sorghum | peroxisome | 87.52 | 87.39 |
| Zm00001d003015_P001 | Maize | peroxisome | 86.68 | 86.43 |
| TraesCS6B01G258600.1 | Wheat | cytosol, peroxisome, plasma membrane | 86.11 | 86.24 |
| TraesCS6B01G258500.1 | Wheat | extracellular, unclear | 84.99 | 84.87 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 11.64 | 81.37 |
| PGSC0003DMT400080765 | Potato | peroxisome | 48.25 | 79.08 |
| CDY18464 | Canola | peroxisome | 46.56 | 78.49 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 50.91 | 77.9 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 42.64 | 77.75 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 24.68 | 76.86 |
| CDX67566 | Canola | cytosol | 52.88 | 76.78 |
| CDX78161 | Canola | cytosol | 53.16 | 76.41 |
| CDX73567 | Canola | cytosol | 53.02 | 76.21 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 72.65 | 75.4 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 54.7 | 75.14 |
| Bra003126.1-P | Field mustard | cytosol | 74.19 | 74.82 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 75.46 | 74.62 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 75.46 | 74.62 |
| Solyc10g086180.1.1 | Tomato | extracellular | 74.19 | 74.4 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 75.18 | 74.34 |
| CDX76219 | Canola | cytosol | 54.42 | 74.33 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 74.05 | 74.26 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 75.04 | 74.1 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 75.04 | 74.1 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 74.47 | 74.06 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 26.79 | 74.03 |
| AT3G10340.1 | Thale cress | peroxisome | 73.21 | 73.83 |
| AT3G53260.1 | Thale cress | cytosol | 74.19 | 73.78 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 74.05 | 73.44 |
| Bra006985.1-P | Field mustard | cytosol | 72.65 | 73.37 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 70.83 | 73.29 |
| CDY08611 | Canola | cytosol | 72.37 | 73.09 |
| Bra029831.1-P | Field mustard | cytosol | 72.37 | 73.09 |
| CDY00922 | Canola | cytosol | 72.37 | 73.09 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 74.05 | 72.83 |
| Solyc09g007890.1.1 | Tomato | plastid | 73.21 | 72.6 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 37.03 | 72.33 |
| TraesCS6B01G258400.2 | Wheat | cytosol, peroxisome, plastid | 71.11 | 72.02 |
| Bra039777.1-P | Field mustard | peroxisome | 51.19 | 71.57 |
| TraesCS3B01G027800.1 | Wheat | mitochondrion | 54.0 | 70.77 |
| CDX99621 | Canola | mitochondrion | 53.3 | 69.47 |
| AT5G04230.2 | Thale cress | peroxisome | 67.18 | 68.62 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 13.88 | 68.28 |
| PGSC0003DMT400055529 | Potato | cytosol | 15.99 | 68.26 |
| TraesCS3B01G053900.1 | Wheat | peroxisome | 65.22 | 67.49 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 64.8 | 66.19 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 64.66 | 66.05 |
| Bra005221.1-P | Field mustard | peroxisome | 34.22 | 65.77 |
| CDY13306 | Canola | peroxisome | 19.35 | 65.71 |
| CDX91331 | Canola | peroxisome | 33.94 | 63.68 |
| CDX74991 | Canola | peroxisome | 33.94 | 63.68 |
| CDY18463 | Canola | peroxisome | 23.42 | 63.5 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 53.58 | 57.44 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 55.12 | 55.9 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 13.32 | 55.23 |
| Solyc10g011930.1.1 | Tomato | cytosol | 9.4 | 52.76 |
| Bra028793.1-P | Field mustard | peroxisome | 21.74 | 52.72 |
| CDY61769 | Canola | peroxisome | 18.65 | 52.57 |
| Solyc10g011920.1.1 | Tomato | cytosol | 9.26 | 51.97 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 61.57 | 49.05 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 11.64 | 47.7 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 14.17 | 28.45 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| InterPro:Aromatic_Lyase | ncoils:Coil | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like |
| PFAM:PF00221 | ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF9 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase |
| InterPro:Phe_NH3-lyase_shielding_dom_sf | SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | EnsemblPlantsGene:TraesCS1B01G048300 | EnsemblPlants:TraesCS1B01G048300.1 | TIGR:cd00332 |
Description
No Description!
Coordinates
chr1B:-:28373463..28375862
Molecular Weight (calculated)
77095.5 Da
IEP (calculated)
6.056
GRAVY (calculated)
-0.123
Length
713 amino acids
Sequence
(BLAST)
(BLAST)
001: MECENGKVAG NGNSLCVAQP ARADPLNWGK AAEELSVSHL DAVKRMVEEY RRPVVTMEGA SLTIAMVAAV ATGSDTRVEL DESARGRVKE SSDWVMNSMA
101: NGTDSYGVTT GFGATSHRRT KEGGALQREL IRFLNAGAFG TGGHEHVLPA AATRAAMLVR VNTLLQGYSG IRFEILETVA ALLNANVTPC LPLRGTITAS
201: GDLVPLSYIA GLVTGRANSV ATAPDGSKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASMVL FEANILSLLA EVLSAIFCEV MNGKPEYTDH
301: LTHKLKHHPG QIEAAAIMEH ILEGSSYMAL AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREINSVND NPLIDVSRGK AIHGGNFQGT
401: PIGVSMDNTR LAIAAIGKLM FAQFSELVND LYNNGLPSNL SGGRNPSLDY GFKGAEIAMA SYCSELQFLG NPVTNHVQSA EQHNQDINSL GLISSRKTAE
501: AIDILKLMSS TFMVALCQAI DLRHLEENVK DAVKNCVKMT ARKTLSTTNN GHLHNARFCE KDLLLTIDRE AVFAYADDPC SANYPLMQKM RAVLVEHALA
601: NGEAELDVES SVFAKLAAFE QELRAELPKE VEAARISVEN GTAALQNRIT ECRSYPLYRL VRKELGTEYL TGEKTRSPGE EVDKVFIAMN QGKHIDALLE
701: CLKEWNGEPL PIC
101: NGTDSYGVTT GFGATSHRRT KEGGALQREL IRFLNAGAFG TGGHEHVLPA AATRAAMLVR VNTLLQGYSG IRFEILETVA ALLNANVTPC LPLRGTITAS
201: GDLVPLSYIA GLVTGRANSV ATAPDGSKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASMVL FEANILSLLA EVLSAIFCEV MNGKPEYTDH
301: LTHKLKHHPG QIEAAAIMEH ILEGSSYMAL AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREINSVND NPLIDVSRGK AIHGGNFQGT
401: PIGVSMDNTR LAIAAIGKLM FAQFSELVND LYNNGLPSNL SGGRNPSLDY GFKGAEIAMA SYCSELQFLG NPVTNHVQSA EQHNQDINSL GLISSRKTAE
501: AIDILKLMSS TFMVALCQAI DLRHLEENVK DAVKNCVKMT ARKTLSTTNN GHLHNARFCE KDLLLTIDRE AVFAYADDPC SANYPLMQKM RAVLVEHALA
601: NGEAELDVES SVFAKLAAFE QELRAELPKE VEAARISVEN GTAALQNRIT ECRSYPLYRL VRKELGTEYL TGEKTRSPGE EVDKVFIAMN QGKHIDALLE
701: CLKEWNGEPL PIC
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.