Factsheet for GSMUA_Achr2P14580_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr5P23850_001
GSMUA_Achr6P03430_001
GSMUA_Achr8P25490_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G48630.1	GSMUA_Achr5P23850_001	AT4G35470.1	21798944
AT1G48630.1	GSMUA_Achr6P03430_001	AT4G35470.1	21798944
AT1G48630.1	GSMUA_Achr8P25490_001	AT4G35470.1	21798944
AT3G18130.1	GSMUA_Achr5P23850_001	AT4G35470.1	21798944
AT3G18130.1	GSMUA_Achr6P03430_001	AT4G35470.1	21798944
AT3G18130.1	GSMUA_Achr8P25490_001	AT4G35470.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P11860_001	Banana	cytosol	51.92	59.34
GSMUA_Achr5P10020_001	Banana	cytosol	56.73	58.61
GSMUA_Achr1P05500_001	Banana	cytosol	50.96	58.46
AT1G48630.1	Thale cress	cytosol	59.62	57.06
CDY64888	Canola	cytosol	54.49	56.86
Bra032261.1-P	Field mustard	cytosol	59.29	56.57
AT3G18130.1	Thale cress	cytosol	58.97	56.44
CDX83869	Canola	cytosol	45.19	56.4
Bra018745.1-P	Field mustard	cytosol	53.85	56.38
CDX95784	Canola	cytosol	58.65	56.31
CDX92200	Canola	extracellular	58.65	56.31
VIT_17s0000g02750.t01	Wine grape	cytosol, plastid	58.97	56.27
Bra016570.1-P	Field mustard	cytosol	58.97	56.27
CDX81860	Canola	cytosol	44.87	56.0
Bra022282.1-P	Field mustard	cytosol	58.33	56.0
CDY59680	Canola	cytosol	40.38	56.0
CDY26186	Canola	cytosol	44.87	56.0
CDX95554	Canola	cytosol	58.33	55.83
CDY18497	Canola	cytosol	58.33	55.83
Bra025931.1-P	Field mustard	cytosol	58.65	55.79
AT1G18080.1	Thale cress	cytosol	58.33	55.66
Bra031014.1-P	Field mustard	cytosol	58.33	55.66
CDX96736	Canola	cytosol	44.55	55.6
KRH41792	Soybean	nucleus	57.69	55.38
CDX93686	Canola	cytosol	52.88	55.37
CDX86074	Canola	cytosol	52.88	55.37
CDY44104	Canola	cytosol	52.88	55.37
CDY71917	Canola	cytosol	43.27	55.33
CDY60778	Canola	cytosol, plastid	44.23	55.2
KRH60497	Soybean	endoplasmic reticulum, nucleus	57.37	55.08
CDY21720	Canola	cytosol	43.91	54.8
PGSC0003DMT400074094	Potato	cytosol	57.05	54.6
Bra021294.1-P	Field mustard	cytosol	56.73	54.29
Solyc06g069010.2.1	Tomato	nucleus	56.73	54.29
Solyc03g119040.2.1	Tomato	nucleus	56.09	53.68
PGSC0003DMT400014419	Potato	cytosol	55.77	53.21
Solyc12g040510.1.1	Tomato	cytosol	55.13	52.28
PGSC0003DMT400040923	Potato	cytosol	54.81	51.98
CDY52180	Canola	cytosol	26.28	50.62
PGSC0003DMT400041253	Potato	cytosol	13.14	48.24
KRH48610	Soybean	cytosol	47.44	43.53
Bra000607.1-P	Field mustard	cytosol	44.87	35.35
CDX77303	Canola	cytosol	20.19	20.39
CDX77299	Canola	plastid	6.09	19.59
CDY46056	Canola	cytosol, endoplasmic reticulum, plasma membrane	35.58	12.35
GSMUA_Achr8P02970_001	Banana	nucleus	16.35	10.08
GSMUA_Achr10P...	Banana	nucleus	15.38	9.2

Protein Annotations

MapMan:17.1.3.1.33	Gene3D:2.130.10.10	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSMUA_Achr2G14580_001	EnsemblPlants:GSMUA_Achr2P14580_001	EnsemblPlants:GSMUA_Achr2T14580_001	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
UniProt:M0S7Z9	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR19868	PANTHER:PTHR19868:SF3	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000294FD66	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:	:

Description

Guanine nucleotide-binding protein subunit beta-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G14580_001]

Coordinates

chr2:+:16286743..16288080

Molecular Weight (calculated)

34505.2 Da

IEP (calculated)

8.221

GRAVY (calculated)

0.023

Length

312 amino acids

Sequence
(BLAST)

001: MAQIAVLSDT LAGHTDMVTA IAVSAYYSPI VVSSSCDKSV LIWKIKDDVT VVPHRRLTGH SHFVEDVVLN SDGQLAFSAS WDGDVRFRDV ATGSITSRFV
101: GHTKDVLSVT ISPDNRQIVS GGRDRIIKVW NSLGECKCTI EGADAHTEWV SCVRFSPNFH KLVLVSDSWD RTVKVWNFTN RKLMYTLVGH TGYVNAVAVT
201: PDGTMCASGG KDTLVLLWEL AIGAKVHEFN AGSIIHAICF SPRWYRLCVA SENDFRIWDL AEKTLLQVLK PETAVGRKKR PFCTSLTWST NGLTLYSGYK
301: DGTIRLWGFS PA

Best Arabidopsis Sequence Match ( AT1G48630.1 )
(BLAST)

001: MAEGLVLKGT MCAHTDMVTA IATPVDNSDV IVTSSRDKSI ILWKLTKEDK SYGVAQRRMT GHSHFVQDVV LSSDGQFALS GSWDGELRLW DLATGESTRR
101: FVGHTKDVLS VAFSTDNRQI VSASRDRTIK LWNTLGECKY TISEADGHKE WVSCVRFSPN TLVPTIVSAS WDKTVKVWNL QNCKLRNTLA GHSGYLNTVA
201: VSPDGSLCAS GGKDGVILLW DLAEGKKLYS LEAGSIIHSL CFSPNRYWLC AATENSIRIW DLESKSVVED LKVDLKAEAE KTDGSTGIGN KTKVIYCTSL
301: NWSADGNTLF SGYTDGVIRV WGIGRY

Arabidopsis Description

RACK1BRACK1B_AT [Source:UniProtKB/TrEMBL;Acc:A0A178W908]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.