Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400041253 | Potato | cytosol | 13.4 | 15.29 |
| EES18632 | Sorghum | cytosol | 24.74 | 7.19 |
| CDY71917 | Canola | cytosol | 17.53 | 6.97 |
| TraesCS3D01G264000.1 | Wheat | cytosol | 23.71 | 6.93 |
| TraesCS3B01G297300.1 | Wheat | nucleus | 23.71 | 6.93 |
| TraesCS3A01G263900.1 | Wheat | nucleus | 23.71 | 6.93 |
| HORVU3Hr1G063670.2 | Barley | cytosol | 23.71 | 6.93 |
| Zm00001d038923_P001 | Maize | plastid | 23.71 | 6.89 |
| Zm00001d009480_P001 | Maize | plasma membrane, plastid | 23.71 | 6.89 |
| CDX81860 | Canola | cytosol | 17.53 | 6.8 |
| CDY60778 | Canola | cytosol, plastid | 17.53 | 6.8 |
| CDY26186 | Canola | cytosol | 17.53 | 6.8 |
| CDY21720 | Canola | cytosol | 17.53 | 6.8 |
| KRH60497 | Soybean | endoplasmic reticulum, nucleus | 22.68 | 6.77 |
| KRH41792 | Soybean | nucleus | 22.68 | 6.77 |
| Solyc06g069010.2.1 | Tomato | nucleus | 22.68 | 6.75 |
| Solyc03g119040.2.1 | Tomato | nucleus | 22.68 | 6.75 |
| PGSC0003DMT400074094 | Potato | cytosol | 22.68 | 6.75 |
| VIT_17s0000g02750.t01 | Wine grape | cytosol, plastid | 22.68 | 6.73 |
| PGSC0003DMT400014419 | Potato | cytosol | 22.68 | 6.73 |
| Solyc12g040510.1.1 | Tomato | cytosol | 22.68 | 6.69 |
| PGSC0003DMT400040923 | Potato | cytosol | 22.68 | 6.69 |
| Os01t0686800-02 | Rice | cytosol | 22.68 | 6.59 |
| TraesCS1B01G398800.1 | Wheat | plastid | 22.68 | 6.57 |
| TraesCS1A01G378000.1 | Wheat | cytosol, golgi, nucleus, unclear | 22.68 | 6.57 |
| CDX96736 | Canola | cytosol | 16.49 | 6.4 |
| CDX83869 | Canola | cytosol | 16.49 | 6.4 |
| TraesCS1D01G385000.1 | Wheat | cytosol | 21.65 | 6.27 |
| HORVU1Hr1G083710.1 | Barley | cytosol | 22.68 | 6.27 |
| CDX95784 | Canola | cytosol | 20.62 | 6.15 |
| CDX92200 | Canola | extracellular | 20.62 | 6.15 |
| CDY18497 | Canola | cytosol | 20.62 | 6.13 |
| CDX95554 | Canola | cytosol | 20.62 | 6.13 |
| GSMUA_Achr2P14580_001 | Banana | cytosol | 19.59 | 6.09 |
| EES01286 | Sorghum | cytosol | 20.62 | 6.02 |
| Os05t0552300-02 | Rice | cytosol | 18.56 | 5.36 |
| CDY64888 | Canola | cytosol | 15.46 | 5.02 |
| CDY59680 | Canola | cytosol | 11.34 | 4.89 |
| CDX93686 | Canola | cytosol | 14.43 | 4.7 |
| CDX86074 | Canola | cytosol | 14.43 | 4.7 |
| CDY44104 | Canola | cytosol | 14.43 | 4.7 |
| CDY28878 | Canola | nucleus | 10.31 | 3.31 |
| CDY39169 | Canola | cytosol, nucleus, plastid | 12.37 | 3.23 |
| CDY52180 | Canola | cytosol | 5.15 | 3.09 |
| CDY21330 | Canola | nucleus | 14.43 | 2.89 |
| CDY62001 | Canola | nucleus | 14.43 | 2.89 |
| CDY45049 | Canola | endoplasmic reticulum, mitochondrion, nucleus, plastid | 5.15 | 2.56 |
| CDX77303 | Canola | cytosol | 6.19 | 1.94 |
| CDY46056 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 14.43 | 1.56 |
Protein Annotations
| EnsemblPlants:CDX77299 | EnsemblPlantsGene:GSBRNA2T00128029001 | ProteinID:CDX77299 | ProteinID:CDX77299.1 | UniParc:UPI0004EF0931 | MapMan:35.2 |
Description
BnaC08g03440D
Coordinates
chrLK031810:+:973951..974487
Molecular Weight (calculated)
10719.8 Da
IEP (calculated)
9.989
GRAVY (calculated)
-0.341
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MIQNEKRVEA TLTSSQTLFS PLTDTSRSPK AERVSFVSGT SPRESPLDVS CGTRLESVST RSPTKVRDIR IGCCVRFSPN KLVPTIVSAY WDQTVKV
001: MAEGLVLKGT MCAHTDMVTA IATPVDNSDV IVTSSRDKSI ILWKLTKEDK SYGVAQRRMT GHSHFVQDVV LSSDGQFALS GSWDGELRLW DLATGESTRR
101: FVGHTKDVLS VAFSTDNRQI VSASRDRTIK LWNTLGECKY TISEADGHKE WVSCVRFSPN TLVPTIVSAS WDKTVKVWNL QNCKLRNTLA GHSGYLNTVA
201: VSPDGSLCAS GGKDGVILLW DLAEGKKLYS LEAGSIIHSL CFSPNRYWLC AATENSIRIW DLESKSVVED LKVDLKAEAE KTDGSTGIGN KTKVIYCTSL
301: NWSADGNTLF SGYTDGVIRV WGIGRY
101: FVGHTKDVLS VAFSTDNRQI VSASRDRTIK LWNTLGECKY TISEADGHKE WVSCVRFSPN TLVPTIVSAS WDKTVKVWNL QNCKLRNTLA GHSGYLNTVA
201: VSPDGSLCAS GGKDGVILLW DLAEGKKLYS LEAGSIIHSL CFSPNRYWLC AATENSIRIW DLESKSVVED LKVDLKAEAE KTDGSTGIGN KTKVIYCTSL
301: NWSADGNTLF SGYTDGVIRV WGIGRY
Arabidopsis Description
RACK1BRACK1B_AT [Source:UniProtKB/TrEMBL;Acc:A0A178W908]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.