Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS7A01G247900.2
TraesCS7B01G143600.3
TraesCS7D01G246700.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G48630.1 TraesCS7A01G247900.2 AT4G35470.1 21798944
AT1G48630.1 TraesCS7B01G143600.3 AT4G35470.1 21798944
AT1G48630.1 TraesCS7D01G246700.1 AT4G35470.1 21798944
AT3G18130.1 TraesCS7A01G247900.2 AT4G35470.1 21798944
AT3G18130.1 TraesCS7B01G143600.3 AT4G35470.1 21798944
AT3G18130.1 TraesCS7D01G246700.1 AT4G35470.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G297300.1 Wheat nucleus 100.0 100.0
TraesCS3A01G263900.1 Wheat nucleus 99.7 99.7
HORVU3Hr1G063670.2 Barley cytosol 99.4 99.4
Os01t0686800-02 Rice cytosol 90.96 90.42
EES01286 Sorghum cytosol 84.64 84.64
TraesCS1D01G385000.1 Wheat cytosol 81.02 80.3
GSMUA_Achr1P05500_001 Banana cytosol 64.46 78.68
GSMUA_Achr5P10020_001 Banana cytosol 70.78 77.81
GSMUA_Achr1P11860_001 Banana cytosol 63.86 77.66
PGSC0003DMT400041253 Potato cytosol 18.98 74.12
PGSC0003DMT400074094 Potato cytosol 72.29 73.62
Solyc06g069010.2.1 Tomato nucleus 72.29 73.62
Solyc03g119040.2.1 Tomato nucleus 71.69 73.01
PGSC0003DMT400014419 Potato cytosol 71.69 72.78
Solyc12g040510.1.1 Tomato cytosol 71.99 72.64
PGSC0003DMT400040923 Potato cytosol 71.99 72.64
KRH60497 Soybean endoplasmic reticulum, nucleus 71.08 72.62
VIT_17s0000g02750.t01 Wine grape cytosol, plastid 71.39 72.48
KRH41792 Soybean nucleus 70.48 72.0
Bra031014.1-P Field mustard cytosol 70.18 71.25
Bra025931.1-P Field mustard cytosol 69.88 70.73
AT1G18080.1 Thale cress cytosol 69.58 70.64
AT3G18130.1 Thale cress cytosol 69.28 70.55
Bra016570.1-P Field mustard cytosol 69.28 70.34
CDX92200 Canola extracellular 68.67 70.15
CDX95784 Canola cytosol 68.67 70.15
CDY21720 Canola cytosol 52.71 70.0
CDX83869 Canola cytosol 52.71 70.0
CDX81860 Canola cytosol 52.71 70.0
CDX96736 Canola cytosol 52.71 70.0
AT1G48630.1 Thale cress cytosol 68.67 69.94
CDX95554 Canola cytosol 68.67 69.94
CDY18497 Canola cytosol 68.67 69.94
Bra022282.1-P Field mustard cytosol 68.37 69.85
CDY26186 Canola cytosol 52.41 69.6
CDY64888 Canola cytosol 62.35 69.23
CDY60778 Canola cytosol, plastid 52.11 69.2
Bra018745.1-P Field mustard cytosol 62.05 69.13
Bra032261.1-P Field mustard cytosol 67.77 68.81
CDY44104 Canola cytosol 61.45 68.46
CDX93686 Canola cytosol 61.45 68.46
CDX86074 Canola cytosol 61.45 68.46
Bra021294.1-P Field mustard cytosol 67.17 68.4
CDY71917 Canola cytosol 49.7 67.62
CDY59680 Canola cytosol 44.88 66.22
CDY52180 Canola cytosol 31.93 65.43
KRH48610 Soybean cytosol 54.82 53.53
Bra000607.1-P Field mustard cytosol 48.19 40.4
CDX77303 Canola cytosol 24.1 25.89
CDX77299 Canola plastid 6.93 23.71
CDY46056 Canola cytosol, endoplasmic reticulum, plasma membrane 39.16 14.46
TraesCS5D01G051600.1 Wheat nucleus 17.77 11.39
Protein Annotations
MapMan:17.1.3.1.33Gene3D:2.130.10.10InterPro:G-protein_beta_WD-40_repGO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005886GO:GO:0006950
GO:GO:0008150GO:GO:0008152GO:GO:0009605GO:GO:0009607GO:GO:0016020GO:GO:0050832
GO:GO:0060267InterPro:IPR001680InterPro:IPR015943InterPro:IPR017986PFAM:PF00400PRINTS:PR00320
ScanProsite:PS00678PFscan:PS50082PFscan:PS50294PANTHER:PTHR19868PANTHER:PTHR19868:SF3SMART:SM00320
SUPFAM:SSF50978EnsemblPlantsGene:TraesCS3D01G264000EnsemblPlants:TraesCS3D01G264000.1InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeatInterPro:WD40_repeat_CS
InterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sfTIGR:cd00200SEG:seg::
Description
No Description!
Coordinates
chr3D:-:365905141..365907094
Molecular Weight (calculated)
36166.5 Da
IEP (calculated)
6.387
GRAVY (calculated)
-0.123
Length
332 amino acids
Sequence
(BLAST)
001: MAGAQESLVY AGVMRGHNDV VTAIATPIDN SPFIVSSSRD KSLLVWDLTN PIQATQDSSS EYGVPFRRLT GHGHFVQDVV LSSDGQFALS GSWDGELRLW
101: DLSTGVTTRR FVGHEKDVLS VAFSIDNRQI VSASRDRTIK LWNTLGECKY TIGGDLGGGE GHTGWVSCVR FSPNNFAPTI VSGSWDRSVK VWNLTNCKLR
201: CTLDGHGGYV SAVAVSPDGS LCASGGKDGV TLLWDLTEGK RLYSLDAGSI INSLCFSPNR YWLCAATQDS IKIWDLESKH IVQDLRPEVP VSTKQMLYCT
301: CLSWSADGST LYAGYTDGTI RIYKISGFSY SS
Best Arabidopsis Sequence Match ( AT1G18080.1 )
(BLAST)
001: MAEGLVLKGT MRAHTDMVTA IATPIDNADI IVSASRDKSI ILWKLTKDDK AYGVAQRRLT GHSHFVEDVV LSSDGQFALS GSWDGELRLW DLAAGVSTRR
101: FVGHTKDVLS VAFSLDNRQI VSASRDRTIK LWNTLGECKY TISEGGEGHR DWVSCVRFSP NTLQPTIVSA SWDKTVKVWN LSNCKLRSTL AGHTGYVSTV
201: AVSPDGSLCA SGGKDGVVLL WDLAEGKKLY SLEANSVIHA LCFSPNRYWL CAATEHGIKI WDLESKSIVE DLKVDLKAEA EKADNSGPAA TKRKVIYCTS
301: LNWSADGSTL FSGYTDGVIR VWGIGRY
Arabidopsis Description
RACK1ARACK1A_AT [Source:UniProtKB/TrEMBL;Acc:A0A178WHX3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.