Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G143600.3 | Wheat | nucleus | 97.02 | 97.53 |
| TraesCS7D01G246700.1 | Wheat | nucleus | 96.14 | 96.14 |
| Zm00001d031470_P001 | Maize | plasma membrane | 76.84 | 75.91 |
| EES14257 | Sorghum | nucleus | 75.79 | 74.74 |
| Os08t0511700-00 | Rice | plasma membrane | 74.74 | 74.22 |
| CDX72539 | Canola | nucleus | 42.11 | 61.07 |
| GSMUA_Achr8P25490_001 | Banana | nucleus | 58.77 | 60.58 |
| GSMUA_Achr5P23850_001 | Banana | cytosol | 57.19 | 59.17 |
| KRH28950 | Soybean | cytosol | 56.32 | 56.61 |
| KRH76512 | Soybean | nucleus | 56.84 | 56.45 |
| VIT_07s0031g02310.t01 | Wine grape | cytosol | 55.09 | 56.37 |
| Bra011617.1-P | Field mustard | cytosol | 44.56 | 55.58 |
| CDX75505 | Canola | cytosol | 52.63 | 55.56 |
| CDX69142 | Canola | cytosol | 52.28 | 54.78 |
| KRH39397 | Soybean | nucleus | 52.81 | 54.63 |
| AT4G35470.1 | Thale cress | nucleus | 52.46 | 54.46 |
| KRH07815 | Soybean | cytosol | 52.28 | 54.38 |
| CDY66405 | Canola | cytosol | 47.19 | 53.8 |
| CDY40632 | Canola | nucleus | 51.4 | 53.76 |
| Bra017712.1-P | Field mustard | nucleus | 51.4 | 53.76 |
| Bra024514.1-P | Field mustard | cytosol | 46.84 | 53.4 |
| CDY07843 | Canola | nucleus | 46.32 | 52.8 |
| AT2G17440.1 | Thale cress | cytosol | 48.07 | 52.09 |
| CDY30364 | Canola | cytosol | 46.67 | 52.05 |
| Bra037271.1-P | Field mustard | cytosol | 47.02 | 52.04 |
| PGSC0003DMT400059678 | Potato | nucleus | 51.93 | 52.02 |
| CDY26809 | Canola | nucleus | 47.54 | 50.75 |
| PGSC0003DMT400035497 | Potato | cytosol | 50.7 | 50.52 |
| Solyc02g082350.2.1 | Tomato | nucleus | 51.05 | 50.43 |
| TraesCS1A01G190500.1 | Wheat | cytosol | 43.86 | 46.82 |
| TraesCS2A01G432800.1 | Wheat | cytosol, nucleus, plastid | 18.77 | 29.32 |
| GSMUA_Achr6P03430_001 | Banana | nucleus | 22.28 | 26.91 |
| TraesCS2A01G327100.1 | Wheat | cytosol, plastid | 23.33 | 26.44 |
| TraesCS4A01G055400.1 | Wheat | nucleus | 13.33 | 22.42 |
| TraesCS1A01G142500.1 | Wheat | cytosol | 13.86 | 21.18 |
| TraesCS6A01G410200.1 | Wheat | cytosol, plasma membrane, plastid | 15.96 | 14.04 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G247900.2 | EnsemblPlantsGene:TraesCS7A01G247900 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR44513 |
| PANTHER:PTHR44513:SF1 | PFAM:PF00560 | PFAM:PF13855 | PFscan:PS51450 | SEG:seg | SMART:SM00364 |
| SMART:SM00369 | SUPFAM:SSF52058 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7A:-:229026704..229028914
Molecular Weight (calculated)
61622.0 Da
IEP (calculated)
6.614
GRAVY (calculated)
-0.165
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAAAFGTL EGVVGEITRL HRSLPARPTL DDVEAAEALA RAADREERAR LDAVEALRRS PLVPEELFYV AQEMHRALAG FQCREQKRDA TRILELDALH
101: ALFDDLIQRA SQCVPSTSTG AAPRITSTAA AGAASSSSAA SSAGPLPAAG RSSLVTNGFS AERTVGTSMG RVSMDDSYVK KAKAPMWDGG LVAASPRKPG
201: GTAAANAAAV GLDDSYGDDK EKISLIKLAS MIEVAAKKGA RELNFKGKLM AQIEWIPDSI GKLTGLVTLD ISENRLVALP PTIGKLSSLT KLDLHANRIA
301: QLPDSVGDLR SLICLDVRGN QLTSLPSSIG RLANLEELDV GANHIVSLPD SVGSLTRLRK LLIETNDLDE LPYTIGHCVS LVELQAGYNH LKALPEAVGK
401: LESLEILSVR YNNIRSLPTT MASLTKLKEV DASFNELESI PENFCFVTSL VKLNVGNNFA DMQSLPRSIG NLEMLEELDI SNNQIRVLPD SFGMLQHLRV
501: LRAEENPLQV PPREIALKGA QAAVQYMAEY AAKKTTKPQP AKAKKNWAQF CFFSRPNKRK HDRIDTDMID
101: ALFDDLIQRA SQCVPSTSTG AAPRITSTAA AGAASSSSAA SSAGPLPAAG RSSLVTNGFS AERTVGTSMG RVSMDDSYVK KAKAPMWDGG LVAASPRKPG
201: GTAAANAAAV GLDDSYGDDK EKISLIKLAS MIEVAAKKGA RELNFKGKLM AQIEWIPDSI GKLTGLVTLD ISENRLVALP PTIGKLSSLT KLDLHANRIA
301: QLPDSVGDLR SLICLDVRGN QLTSLPSSIG RLANLEELDV GANHIVSLPD SVGSLTRLRK LLIETNDLDE LPYTIGHCVS LVELQAGYNH LKALPEAVGK
401: LESLEILSVR YNNIRSLPTT MASLTKLKEV DASFNELESI PENFCFVTSL VKLNVGNNFA DMQSLPRSIG NLEMLEELDI SNNQIRVLPD SFGMLQHLRV
501: LRAEENPLQV PPREIALKGA QAAVQYMAEY AAKKTTKPQP AKAKKNWAQF CFFSRPNKRK HDRIDTDMID
001: MDLMQMDKRL DSTEQVVEEI MRIHRSLPAR PGIDEVEAAK GLIDNVEKED QACLEAIARQ RKSSEVPGEL FMVLQEMKKG YVQFRSKEQI REALKLLDLE
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV
Arabidopsis Description
PIRL4Plant intracellular Ras-group-related LRR protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVW8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.