CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07815	Soybean	cytosol	94.92	95.44
KRH76512	Soybean	nucleus	76.22	73.17
KRH28950	Soybean	cytosol	74.77	72.66
VIT_07s0031g02310.t01	Wine grape	cytosol	69.87	69.12
CDX72539	Canola	nucleus	48.64	68.19
AT4G35470.1	Thale cress	nucleus	65.52	65.76
GSMUA_Achr5P23850_001	Banana	cytosol	65.52	65.52
GSMUA_Achr8P25490_001	Banana	nucleus	64.97	64.74
Bra024514.1-P	Field mustard	cytosol	58.62	64.6
CDY66405	Canola	cytosol	58.26	64.2
CDY07843	Canola	nucleus	57.89	63.8
Bra037271.1-P	Field mustard	cytosol	59.53	63.69
CDY30364	Canola	cytosol	58.98	63.6
CDX75505	Canola	cytosol	62.25	63.52
PGSC0003DMT400059678	Potato	nucleus	65.34	63.27
CDY40632	Canola	nucleus	62.43	63.12
Bra017712.1-P	Field mustard	nucleus	62.43	63.12
PGSC0003DMT400035497	Potato	cytosol	65.34	62.94
AT2G17440.1	Thale cress	cytosol	60.07	62.93
CDX69142	Canola	cytosol	62.07	62.87
Solyc02g082350.2.1	Tomato	nucleus	65.7	62.74
Bra011617.1-P	Field mustard	cytosol	51.72	62.36
CDY26809	Canola	nucleus	59.71	61.61
EES14257	Sorghum	nucleus	57.35	54.67
Zm00001d031470_P001	Maize	plasma membrane	57.17	54.59
TraesCS7B01G143600.3	Wheat	nucleus	54.81	53.26
Os08t0511700-00	Rice	plasma membrane	55.35	53.14
TraesCS7A01G247900.2	Wheat	cytosol	54.63	52.81
TraesCS7D01G246700.1	Wheat	nucleus	54.08	52.28
KRH04326	Soybean	cytosol	45.55	48.46
KRH58211	Soybean	mitochondrion	15.61	36.44
KRH37361	Soybean	cytosol	21.05	32.68
KRH12356	Soybean	cytosol	21.05	31.96
KRH54661	Soybean	cytosol	15.06	31.8
KRH63260	Soybean	cytosol	15.06	31.8
KRH02753	Soybean	cytosol	19.96	30.56
KRH74520	Soybean	cytosol	24.5	29.28
GSMUA_Achr6P03430_001	Banana	nucleus	21.6	25.21
KRH63625	Soybean	nucleus	23.41	25.15
KRH57134	Soybean	plastid	23.05	24.85
KRG98234	Soybean	cytosol	12.89	18.93
KRH27219	Soybean	cytosol	18.87	17.75
KRH22120	Soybean	cytosol	18.51	17.5
KRH30190	Soybean	cytosol, nucleus, peroxisome, plastid	9.98	17.46

Protein Annotations

EntrezGene:100812840	Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02005934	ncoils:Coil	EnsemblPlantsGene:GLYMA_09G196300
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	UniProt:I1L4P0
InterPro:IPR001611	InterPro:IPR032675	ProteinID:KRH39396.1	EnsemblPlants:KRH39397	ProteinID:KRH39397	ProteinID:KRH39397.1
ProteinID:KRH39398.1	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_4	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560
PFAM:PF12799	PFAM:PF13855	PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR44513	PANTHER:PTHR44513:SF1
SMART:SM00364	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0002339183	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:+:42093879..42097833

Molecular Weight (calculated)

61215.9 Da

IEP (calculated)

6.617

GRAVY (calculated)

-0.239

Length

551 amino acids

Sequence
(BLAST)

001: MDLLPARSVD ETVEEIMRLH RSLPARPGIE EVEAARTLVE NVEREDQAKL EAVARARERK GPHVPEELFA VLQEMQKNVV LFQSKEQRRE ALKLLDLENV
101: HVLFDELIQR ASNCVSARSS GSKNSVSKRE TSFSTASVSA FKKEPVKSSE ILFTRDDSYM NKTKPNFYSD GYTIGPSVSS KPPILDSSLI PASTSGEQSG
201: DKLSLIKLAS LIEVSAKKGT RELILQNKLM DQVDWLPDSI GKLSSLIKLD LSENRIMVLP STIGSLSSLT SLDLHSNKIA ELPECVGDLL SLVYLNVGGN
301: QLSSLPASLG RLVHLEELDL SSNQLSVLPD AIGSLVSLKI LNVETNDIEE IPHSIGRCVA LKELCADYNR LKALPEAVGK IESLEVLSVR YNNVKQLPTT
401: MSSLSNLKEL NVSFNELEYV PESLCFATSL VKMNIGNNFA DMRSLPRSIG NLEMLEELDI SNNQIRVLPD SFGMLTRLRV LKVEENPLEI PPRHVAEKGA
501: QAVVKYMADL VEKKDVKSQP LIKKKKGWAH HMCFFSKSNK RKRDGVDFVK T

Best Arabidopsis Sequence Match ( AT2G17440.1 )
(BLAST)

001: MDSKEMVVEE IMRIHRSLPL RPEIDDVETA TSLIQNVEKE DRNRLEAIDK LVKTSSSEVP LELFNVFKEM KKSLVRFQST EQTREATKIL DLESVHVVFD
101: ELIQRASFCI ASPNSTTALP RSVPVPAPVV SSDEIPFKSK EIISRDDTFV KKAKSSFYSD GLLAPSKPQV LDSTLHQAKN VAGNDGEKLS LIKLASLIEV
201: SAKKATQELN LQHRLMDQLE WLPDSLGKLS SLVRLDLSEN CIMVLPATIG GLISLTRLDL HSNRIGQLPE SIGDLLNLVN LNLSGNQLSS LPSSFNRLIH
301: LEELDLSSNS LSILPESIGS LVSLKKLDVE TNNIEEIPHS ISGCSSMEEL RADYNRLKAL PEAVGKLSTL EILTVRYNNI RQLPTTMSSM ANLKELDVSF
401: NELESVPESL CYAKTLVKLN IGNNFANLRS LPGLIGNLEK LEELDMSNNQ IRFLPYSFKT LSNLRVLQTE QNPLEELPRD ITEKGAQAVV QYMNDLVEAR
501: NTKSQRTKPK KSWVNSICFF CKSSTN

Arabidopsis Description

PIRL5Plant intracellular Ras-group-related LRR protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5G5E0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.