Factsheet for Os08t0511700-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

plasma membrane: 18260611
plasma membrane: 19502382
plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19502382 doi

M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto

Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0179600-01
Os06t0652100-00
Os09t0499400-01
Os09t0499500-01
Os12t0141800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35470.1	Os02t0179600-01	AT5G43400.1	21798944
AT4G35470.1	Os06t0652100-00	AT5G43400.1	21798944
AT4G35470.1	Os09t0499400-01	AT5G43400.1	21798944
AT4G35470.1	Os09t0499500-01	AT5G43400.1	21798944
AT4G35470.1	Os12t0141800-01	AT5G43400.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G143600.3	Wheat	nucleus	75.09	76.01
Zm00001d031470_P001	Maize	plasma membrane	76.13	75.74
EES14257	Sorghum	nucleus	76.13	75.61
TraesCS7A01G247900.2	Wheat	cytosol	74.22	74.74
TraesCS7D01G246700.1	Wheat	nucleus	73.52	74.04
CDX72539	Canola	nucleus	43.03	62.85
GSMUA_Achr8P25490_001	Banana	nucleus	57.14	59.31
GSMUA_Achr5P23850_001	Banana	cytosol	55.05	57.35
CDY66405	Canola	cytosol	48.95	56.2
Bra011617.1-P	Field mustard	cytosol	44.6	56.02
VIT_07s0031g02310.t01	Wine grape	cytosol	54.36	56.01
Bra024514.1-P	Field mustard	cytosol	48.61	55.8
CDY07843	Canola	nucleus	48.43	55.6
CDX75505	Canola	cytosol	52.26	55.56
AT4G35470.1	Thale cress	nucleus	52.96	55.37
KRH39397	Soybean	nucleus	53.14	55.35
CDX69142	Canola	cytosol	52.44	55.33
KRH07815	Soybean	cytosol	52.44	54.93
Bra037271.1-P	Field mustard	cytosol	48.95	54.56
AT2G17440.1	Thale cress	cytosol	49.83	54.37
CDY30364	Canola	cytosol	48.08	54.01
KRH76512	Soybean	nucleus	53.83	53.83
Bra017712.1-P	Field mustard	nucleus	51.05	53.76
CDY40632	Canola	nucleus	51.05	53.76
KRH28950	Soybean	cytosol	52.44	53.09
CDY26809	Canola	nucleus	49.13	52.81
Solyc02g082350.2.1	Tomato	nucleus	52.09	51.82
PGSC0003DMT400035497	Potato	cytosol	51.22	51.4
PGSC0003DMT400059678	Potato	nucleus	50.87	51.32
Os10t0572300-01	Rice	plasma membrane	45.3	47.88
Os04t0605300-01	Rice	nucleus	19.16	31.25
Os03t0212200-01	Rice	plasma membrane	7.14	28.87
Os02t0593600-01	Rice	plasma membrane	24.39	27.94
GSMUA_Achr6P03430_001	Banana	nucleus	21.25	25.85
Os02t0826600-01	Rice	cytosol	16.55	16.21

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A0P0XIR6	ProteinID:BAT06204.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009416	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	EnsemblPlantsGene:Os08g0511700	EnsemblPlants:Os08t0511700-00
PFAM:PF00560	PFAM:PF13855	PFscan:PS51450	PANTHER:PTHR44513	PANTHER:PTHR44513:SF1	SMART:SM00364
SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0001C79A3E	SEG:seg	:	:

Description

PYRICULARIA ORYZAE RESISTANCE 55-1Similar to PSR9 (Fragment). (Os08t0511700-00)

Coordinates

chr8:-:25377754..25380592

Molecular Weight (calculated)

62017.2 Da

IEP (calculated)

6.273

GRAVY (calculated)

-0.188

Length

574 amino acids

Sequence
(BLAST)

001: MGAVGVEAGV FDTVDGLVGE VMRLHRSLPA RPAVEEVEAA EALAAAADRE ERARADAVAR LRRSPAVPDE LLCVAQEMHR ALAGFQCREQ KRDAARLLEL
101: EALHTLFDDL IQRASQCLPS TSTRAAPRIA APAAATTTTS TAAAGSSSSS AVGNAERHAS SGTNGFTASR VAGTSTSTGR VSMDDSYVRK AKAAMWDGGA
201: AATNSHLPRG PVEANSVAVR ADGNYGDDNE KLSLIKLASM IEVSAKKGAR DLNLQGKLMA QIEWLPDSIG KLTGLVTLDI SENRLLALPD AIGKLFSLAK
301: LDIHANRISQ LPESIGDLRS LIYLNMRGNQ LSSLPSSIGR LLNLEELDVG SNGLSSLPDS IGSLTRLKKL IVETNDLDEL PYTIGHCVSL VELQAGYNHL
401: KALPEAVGKL EPLEILSVRY NNLRSLPTTM ASLTKLKEVD VSFNELESIP ENFCFATSLI KLNVGNNFAD LQYLPRSIGN LEMLEELDMS NNQIRVLPDS
501: FGNLKHLRVL RAEENPLQVP PRDIALKGAQ AVVQYMSDAS KRTTKSEPMK PKKTWKWCIV FIERQNGEFK DSCG

Best Arabidopsis Sequence Match ( AT4G35470.1 )
(BLAST)

001: MDLMQMDKRL DSTEQVVEEI MRIHRSLPAR PGIDEVEAAK GLIDNVEKED QACLEAIARQ RKSSEVPGEL FMVLQEMKKG YVQFRSKEQI REALKLLDLE
101: SVHSLFDDFI QRASNCIASP SSNGSVSSRP PLPPATTTAA RSDSQSSLNF SERAPVRPKD MVSRDDSFVT KSKPSSLYSD GFAAPPRRPQ ILDSTLTTGN
201: DGEKLSLIKL ASLIEVSAKK ATQEINLQNK LTEQLEWLPD SLGKLSSLTS LDLSENHIVV LPNTIGGLSS LTKLDLHSNR IGQLPESIGE LLNLVYLNLG
301: SNQLSSLPSA FSRLVRLEEL DLSCNNLPIL PESIGSLVSL KKLDVETNDI EEIPYSIGGC SSLIELRADY NKLKALPEAI GKITTLEILS VRYNNIRQLP
401: TTMSSLASLK ELDVSFNELE SVPESLCFAT TLVKLNIGNN FADMVSLPRS IGNLEMLEEL DISNNQIRVL PDSFKMLTKL RVFRAQENPL HIPPRDIAEK
501: GPQAVVQYMN DLVETRNAKS LMVKPKKSWV QMCFFSKSNK RKQSSMEIV

Arabidopsis Description

PIRL4Plant intracellular Ras-group-related LRR protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.