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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • extracellular 1
  • mitochondrion 2
  • plastid 1
  • plasma membrane 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, extracellular, mitochondrion, nucleus, plasma membrane, plastid
PProwler:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400094367 Potato cytosol 49.62 62.26
CDX99560 Canola cytosol 58.65 57.35
Solyc01g009540.1.1 Tomato cytosol 39.1 54.74
VIT_05s0049g00650.t01 Wine grape cytosol 42.11 42.42
CDX69659 Canola cytosol 66.92 32.25
CDX86854 Canola cytosol 60.15 27.59
PGSC0003DMT400030583 Potato cytosol, vacuole 19.55 26.53
TraesCS5A01G319700.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 81.2 25.96
CDY60899 Canola cytosol 56.39 24.59
TraesCS7D01G496700.1 Wheat cytosol 77.44 23.41
TraesCS6A01G073400.1 Wheat cytosol, peroxisome, plastid 80.45 18.9
OQU84313 Sorghum mitochondrion 87.22 17.39
EER93519 Sorghum mitochondrion 84.21 16.16
EER88676 Sorghum mitochondrion, plastid 85.71 16.12
TraesCS5B01G302900.1 Wheat plastid 84.96 16.07
TraesCS5D01G309300.1 Wheat plastid 81.95 15.59
TraesCS5A01G302600.1 Wheat plastid 81.95 15.55
TraesCS1A01G354300.1 Wheat cytosol 81.2 15.38
TraesCS7D01G394600.1 Wheat cytosol 80.45 15.35
TraesCS1D01G356100.1 Wheat cytosol, nucleus, peroxisome 81.2 15.34
TraesCS5B01G319900.1 Wheat cytosol, nucleus, peroxisome 79.7 15.27
TraesCS1B01G367400.1 Wheat cytosol 80.45 15.24
HORVU6Hr1G013080.3 Barley nucleus, peroxisome 80.45 15.2
TraesCS5D01G325700.1 Wheat cytosol, nucleus, plastid 78.95 15.17
TraesCS7B01G301000.1 Wheat cytosol 79.7 15.14
TraesCS7B01G417500.1 Wheat cytosol, plastid 76.69 15.13
TraesCS6D01G071700.1 Wheat cytosol 80.45 15.07
TraesCS6B01G098400.1 Wheat cytosol 80.45 15.07
TraesCS5B01G320000.1 Wheat cytosol 78.95 14.17
VIT_01s0146g00440.t01 Wine grape cytosol, mitochondrion 63.91 13.73
PGSC0003DMT400030584 Potato cytosol, plastid 63.16 13.73
Bra035287.1-P Field mustard cytosol 60.9 13.66
Os02t0179600-01 Rice extracellular 65.41 13.26
CDY09774 Canola cytosol, plastid 64.66 13.25
Bra008847.1-P Field mustard nucleus, plastid 66.17 13.21
PGSC0003DMT400044378 Potato cytosol 63.16 13.19
Solyc09g089940.1.1 Tomato cytosol 63.16 13.19
Os06t0652100-00 Rice mitochondrion 62.41 12.95
KRH75085 Soybean cytosol, plastid 62.41 12.85
HORVU5Hr1G081560.3 Barley nucleus 67.67 12.8
AT5G43390.1 Thale cress cytosol, plastid 59.4 12.29
PGSC0003DMT400070342 Potato cytosol 36.09 12.09
VIT_05s0049g00560.t01 Wine grape cytosol 47.37 11.93
Bra033679.1-P Field mustard plastid 56.39 11.65
AT5G43400.1 Thale cress plastid 57.14 11.6
CDY22349 Canola plastid 53.38 11.6
AT5G13210.1 Thale cress cytosol, plastid 58.65 11.59
Os09t0499400-01 Rice vacuole 42.11 9.43
AT3G24780.1 Thale cress nucleus 47.37 8.81
Zm00001d045614_P001 Maize mitochondrion 2.26 3.3
CDX86853 Canola endoplasmic reticulum, extracellular 1.5 1.08
Solyc01g009530.1.1 Tomato cytosol 1.5 0.93
HORVU5Hr1G079390.2 Barley cytosol, nucleus, plastid 3.01 0.74
Os12t0141800-01 Rice cytosol, mitochondrion, peroxisome, plastid 0.75 0.55
CDX99561 Canola nucleus, plastid 0.75 0.32
CDX69660 Canola plastid 0.0 0.0
VIT_05s0049g00640.t01 Wine grape cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Os09t0499500-01EnsemblPlantsGene:Os09g0499500InterPro:DUF2828InterPro:UCP015417_vWAPANTHER:PTHR31373PANTHER:PTHR31373:SF2
PFAM:PF11443PIRSF:PIRSF015417ProteinID:BAT08803.1UniParc:UPI000393996FUniProt:A0A0P0XNX8MapMan:35.2
Description
Domain of unknown function DUF2828 domain containing protein. (Os09t0499500-01)
Coordinates
chr9:+:19334672..19335218
Molecular Weight (calculated)
14797.5 Da
IEP (calculated)
4.280
GRAVY (calculated)
-0.056
Length
133 amino acids
Sequence
(BLAST)
001: CMNTNFQAVF DQILRTAVDG RLPPEKMIRT VFVFSDMEFD EASTNHWETD YETICRKFGS AGYGDAVPQI VFWNLRDSTS TPVTSTQPGV AMVSGFSKNL
101: LKIFLQNDGV VNPEAVMAAA IAGEEYQKLV VFD
Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)
001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD
Arabidopsis Description
AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.