CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09774	Canola	cytosol, plastid	88.95	47.15
Bra008847.1-P	Field mustard	nucleus, plastid	89.83	46.4
CDX86853	Canola	endoplasmic reticulum, extracellular	24.71	45.7
CDX99561	Canola	nucleus, plastid	39.83	43.22
Zm00001d045614_P001	Maize	mitochondrion	10.17	38.46
Solyc01g009530.1.1	Tomato	cytosol	22.67	36.45
AT5G13210.1	Thale cress	cytosol, plastid	70.93	36.26
HORVU3Hr1G117270.1	Barley	cytosol	31.1	32.82
AT3G24780.1	Thale cress	nucleus	67.44	32.45
PGSC0003DMT400030584	Potato	cytosol, plastid	55.23	31.05
KRH75085	Soybean	cytosol, plastid	51.45	27.4
Os12t0141800-01	Rice	cytosol, mitochondrion, peroxisome, plastid	14.53	27.32
CDY22349	Canola	plastid	48.55	27.29
HORVU5Hr1G079390.2	Barley	cytosol, nucleus, plastid	42.73	27.07
GSMUA_AchrUn_...	Banana	cytosol, plastid	43.9	25.29
Os02t0179600-01	Rice	extracellular	45.64	23.93
TraesCS6B01G176900.1	Wheat	cytosol, nucleus, peroxisome, plastid	43.9	23.3
EER88742	Sorghum	plastid	44.77	23.26
TraesCS6A01G148700.1	Wheat	cytosol	43.31	23.21
Zm00001d053740_P001	Maize	cytosol	43.9	23.05
TraesCS6D01G138100.1	Wheat	cytosol, nucleus, peroxisome, plastid	42.44	22.92
EER93519	Sorghum	mitochondrion	45.93	22.8
OQU84313	Sorghum	mitochondrion	44.19	22.79
TraesCS7B01G410500.1	Wheat	mitochondrion, plastid	41.28	22.61
TraesCS5B01G302800.1	Wheat	cytosol, plastid	40.41	22.13
TraesCS5A01G302600.1	Wheat	plastid	45.06	22.11
EES01714	Sorghum	plastid	39.53	22.01
HORVU5Hr1G079400.3	Barley	cytosol, nucleus, plastid	39.83	21.92
HORVU6Hr1G029540.1	Barley	cytosol, nucleus, peroxisome	41.57	21.9
TraesCS5A01G302500.1	Wheat	cytosol, plastid	40.12	21.84
TraesCS5B01G302900.1	Wheat	plastid	44.48	21.76
KXG29624	Sorghum	cytosol	41.86	21.75
TraesCS5D01G309200.1	Wheat	plastid	39.83	21.75
KXG37641	Sorghum	plastid	39.83	21.75
HORVU6Hr1G013080.3	Barley	nucleus, peroxisome	44.48	21.73
Os06t0652100-00	Rice	mitochondrion	40.41	21.68
TraesCS7D01G490900.1	Wheat	mitochondrion	40.7	21.64
TraesCS5D01G309300.1	Wheat	plastid	43.9	21.6
TraesCS7A01G503000.1	Wheat	mitochondrion	43.02	21.57
TraesCS5B01G319900.1	Wheat	cytosol, nucleus, peroxisome	43.31	21.47
HORVU7Hr1G112970.1	Barley	cytosol, nucleus	40.12	21.43
TraesCS5D01G325700.1	Wheat	cytosol, nucleus, plastid	43.02	21.39
Os09t0499400-01	Rice	vacuole	36.92	21.38
TraesCS1B01G367400.1	Wheat	cytosol	43.6	21.37
TraesCS7B01G417500.1	Wheat	cytosol, plastid	41.86	21.36
TraesCS5B01G320000.1	Wheat	cytosol	45.93	21.32
TraesCS6A01G149200.1	Wheat	cytosol	40.12	21.26
TraesCS6B01G098400.1	Wheat	cytosol	43.6	21.13
EER88676	Sorghum	mitochondrion, plastid	43.31	21.07
TraesCS3B01G607400.1	Wheat	cytosol	39.53	21.05
TraesCS7B01G301000.1	Wheat	cytosol	42.73	21.0
TraesCS6D01G071700.1	Wheat	cytosol	43.31	20.99
TraesCS7D01G394600.1	Wheat	cytosol	42.44	20.95
TraesCS1A01G354300.1	Wheat	cytosol	42.73	20.94
TraesCS1D01G356100.1	Wheat	cytosol, nucleus, peroxisome	42.73	20.88
TraesCS7D01G490400.1	Wheat	mitochondrion	41.86	20.66
TraesCS7B01G410400.1	Wheat	mitochondrion	41.86	20.54
TraesCS6B01G177100.1	Wheat	cytosol	37.79	20.54
TraesCS7B01G410900.1	Wheat	cytosol, nucleus, plastid	25.0	18.42
TraesCS3D01G541900.1	Wheat	mitochondrion	25.58	17.78
TraesCS7D01G490500.1	Wheat	cytosol	25.29	17.65
HORVU5Hr1G081560.3	Barley	nucleus	33.43	16.36
HORVU7Hr1G112960.3	Barley	nucleus	26.74	14.86
TraesCS6A01G073400.1	Wheat	cytosol, peroxisome, plastid	24.42	14.84
TraesCS5A01G319700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	16.28	13.46
TraesCS7D01G496700.1	Wheat	cytosol	16.28	12.73
OQU88215	Sorghum	cytosol	11.34	9.75
TraesCS6D01G138500.1	Wheat	mitochondrion, plastid	3.2	3.26
VIT_05s0049g00650.t01	Wine grape	cytosol	0.87	2.27
CDY60899	Canola	cytosol	0.87	0.98
CDX69659	Canola	cytosol	0.0	0.0
CDX99560	Canola	cytosol	0.0	0.0
CDX86854	Canola	cytosol	0.0	0.0
Solyc01g009540.1.1	Tomato	cytosol	0.0	0.0
PGSC0003DMT400030583	Potato	cytosol, vacuole	0.0	0.0
Os09t0499500-01	Rice	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX69660	EnsemblPlantsGene:GSBRNA2T00135686001	InterPro:DUF2828	InterPro:UCP015417_vWA	ncoils:Coil	PANTHER:PTHR31373
PFAM:PF11443	PIRSF:PIRSF015417	ProteinID:CDX69660	ProteinID:CDX69660.1	SEG:seg	UniParc:UPI0004EEA2E2
MapMan:35.2	:	:	:	:	:

Description

BnaA10g20090D

Coordinates

chrLK031790:-:1227648..1228706

Molecular Weight (calculated)

38918.7 Da

IEP (calculated)

10.235

GRAVY (calculated)

-0.555

Length

344 amino acids

Sequence
(BLAST)

001: MASPLLGPPE LKNSNSPLPA SGPRDPFMDL MVSNFNKSTK VNVSLSPPMG LTENGAATYL SAGNPCLDFF FHVVPSTPKE SIEQRLSTAW SHDALTTLKL
101: ICNLRGVRGT GKSDKEGFYT AALWLHGCHP KTLACNLDSL SKFGYFKDFP EILYRILKGF EIRRVQKSEW LQRKGRRSAP RSGGARAPFF IDLSRSSHKG
201: RGRKKPAATR EMRIANAEKR NQEEKAKASL DRKLEKISMG KKAFTRYSQD PDYRFLHERV SDLFADYLKK DLEFLASGET NKISLAAKWC PSLDSSFDKA
301: TLLCESIARR IFPRESFPEY EGVEEAHYAY RVRDRLRKQV LVPL

Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)

001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD

Arabidopsis Description

AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.