Factsheet for TraesCS6B01G177100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G149200.1	Wheat	cytosol	90.52	88.29
TraesCS6B01G176900.1	Wheat	cytosol, nucleus, peroxisome, plastid	73.93	72.22
KXG29624	Sorghum	cytosol	72.2	69.03
Os02t0179600-01	Rice	extracellular	70.14	67.68
Zm00001d053740_P001	Maize	cytosol	69.04	66.72
TraesCS7B01G410900.1	Wheat	cytosol, nucleus, plastid	47.55	64.45
TraesCS6D01G138500.1	Wheat	mitochondrion, plastid	34.28	64.39
PGSC0003DMT400094367	Potato	cytosol	10.58	63.21
TraesCS7B01G410500.1	Wheat	mitochondrion, plastid	60.51	60.99
CDX86854	Canola	cytosol	27.8	60.69
CDX99560	Canola	cytosol	12.64	58.82
CDY60899	Canola	cytosol	28.12	58.36
CDX69659	Canola	cytosol	25.28	57.97
Solyc01g009540.1.1	Tomato	cytosol	8.21	54.74
TraesCS7B01G410400.1	Wheat	mitochondrion	58.45	52.78
GSMUA_AchrUn_...	Banana	cytosol, plastid	48.5	51.42
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.9	51.02
PGSC0003DMT400070342	Potato	cytosol	31.91	50.88
VIT_05s0049g00640.t01	Wine grape	cytosol	6.48	50.62
PGSC0003DMT400044378	Potato	cytosol	50.24	49.92
Solyc09g089940.1.1	Tomato	cytosol	50.08	49.76
KRH75085	Soybean	cytosol, plastid	50.39	49.38
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	48.18	49.27
CDY22349	Canola	plastid	46.92	48.53
VIT_05s0049g00650.t01	Wine grape	cytosol	10.11	48.48
PGSC0003DMT400030584	Potato	cytosol, plastid	46.13	47.71
Bra033679.1-P	Field mustard	plastid	48.5	47.67
TraesCS7B01G417500.1	Wheat	cytosol, plastid	49.92	46.88
CDY09774	Canola	cytosol, plastid	48.03	46.84
TraesCS1B01G367400.1	Wheat	cytosol	51.5	46.44
AT5G43400.1	Thale cress	plastid	47.87	46.26
VIT_05s0049g00560.t01	Wine grape	cytosol	38.55	46.21
Bra035287.1-P	Field mustard	cytosol	43.29	46.21
TraesCS7B01G301000.1	Wheat	cytosol	51.03	46.14
AT5G43390.1	Thale cress	cytosol, plastid	46.76	46.03
Bra008847.1-P	Field mustard	nucleus, plastid	48.18	45.8
AT5G13210.1	Thale cress	cytosol, plastid	48.66	45.77
TraesCS5B01G302900.1	Wheat	plastid	50.71	45.66
Solyc01g009530.1.1	Tomato	cytosol	15.32	45.33
TraesCS6B01G098400.1	Wheat	cytosol	50.55	45.07
TraesCS5B01G319900.1	Wheat	cytosol, nucleus, peroxisome	49.13	44.81
TraesCS5B01G302800.1	Wheat	cytosol, plastid	44.08	44.43
TraesCS3B01G607400.1	Wheat	cytosol	44.39	43.5
TraesCS5B01G320000.1	Wheat	cytosol	49.45	42.24
AT3G24780.1	Thale cress	nucleus	46.13	40.84
CDX69660	Canola	plastid	20.54	37.79
CDX99561	Canola	nucleus, plastid	15.32	30.6
CDX86853	Canola	endoplasmic reticulum, extracellular	8.21	27.96

Protein Annotations

EnsemblPlants:TraesCS6B01G177100.1	EnsemblPlantsGene:TraesCS6B01G177100	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
PANTHER:PTHR31373	PANTHER:PTHR31373:SF3	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	SUPFAM:SSF53300
TIGR:cd00198	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:194859784..194861763

Molecular Weight (calculated)

69808.1 Da

IEP (calculated)

10.134

GRAVY (calculated)

-0.184

Length

633 amino acids

Sequence
(BLAST)

001: MITVAALTDE ASSGPKDWSV KRESDALGPA GKTRTKKRSP TFLCSGDPCL DFFRVLPATP AATVARLLAA AWVADPSTAL RLVANLRGVR GSGKSDRESF
101: YAAALWLHAR HPATLARNAA SVAAFGYLKD LPELLHWIVR GGLSNKAERR TALLATGRRG PFGLGRYRNS LGRTRNFRKR RPRPKVDRAA RVGTAEERLA
201: AKLRHDRELS AAAAVSRRSK RVGTAATAIR RYRCDPTYRF LHDRTADLFA SLLVEDMRKL ANDDVRELSL AAKWCPSLGS SYDRSTLLCE AVARRLFPRG
301: SSPELADDLP DEPYAYRARE RLRRTALVPL RRALQLPEVF MSARAWESVV YTRVASVAMK NYQAVFLKHD AERFNAYLAD VKSSKKRIAA GALLPHQIIE
401: SLGEDGDGAG TGVADMQWRR MVDDMRALGK LTNCLAVCDV SGSMSGLPMD VCVALGLLVS ELTDDPWSGR VITFSERPEI HLITGDTLSE KVGFMRAMDW
501: GMNTNFQAVF DKILEVAVGA GLPPERMVRR VFVFSDMEFD QASAHPWETD YEAIVRKFSE AGYGSAVPEI VFWNLAYSKA VPVMSGQKGV ALVSGFSKNL
601: LKLFLDGGGI VTPRTIMEKA IVGPEYDKLT VFD

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.