Factsheet for TraesCS6D01G138500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0049g00640.t01	Wine grape	cytosol	13.06	54.32
PGSC0003DMT400030583	Potato	cytosol, vacuole	14.84	51.02
CDX86854	Canola	cytosol	41.25	47.93
CDX69659	Canola	cytosol	37.98	46.38
CDY60899	Canola	cytosol	38.58	42.62
TraesCS6B01G177100.1	Wheat	cytosol	64.39	34.28
TraesCS7D01G490500.1	Wheat	cytosol	50.15	34.28
TraesCS6A01G149200.1	Wheat	cytosol	65.58	34.05
CDX99560	Canola	cytosol	13.65	33.82
TraesCS6D01G138100.1	Wheat	cytosol, nucleus, peroxisome, plastid	59.94	31.71
TraesCS7D01G496700.1	Wheat	cytosol	40.36	30.91
PGSC0003DMT400070342	Potato	cytosol	34.12	28.97
KXG29624	Sorghum	cytosol	56.08	28.55
Os02t0179600-01	Rice	extracellular	55.49	28.51
Zm00001d053740_P001	Maize	cytosol	53.71	27.63
PGSC0003DMT400094367	Potato	cytosol	8.31	26.42
TraesCS7D01G490900.1	Wheat	mitochondrion	49.85	25.97
VIT_05s0049g00560.t01	Wine grape	cytosol	40.06	25.57
Bra035287.1-P	Field mustard	cytosol	41.84	23.78
Solyc09g089940.1.1	Tomato	cytosol	44.51	23.55
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	42.73	23.26
KRH75085	Soybean	cytosol, plastid	44.51	23.22
PGSC0003DMT400044378	Potato	cytosol	43.62	23.08
CDY22349	Canola	plastid	41.84	23.04
CDY09774	Canola	cytosol, plastid	44.21	22.96
TraesCS7D01G490400.1	Wheat	mitochondrion	47.18	22.81
PGSC0003DMT400030584	Potato	cytosol, plastid	40.65	22.39
AT5G13210.1	Thale cress	cytosol, plastid	44.51	22.29
Bra033679.1-P	Field mustard	plastid	42.43	22.2
GSMUA_AchrUn_...	Banana	cytosol, plastid	39.17	22.11
Bra008847.1-P	Field mustard	nucleus, plastid	43.62	22.07
AT5G43400.1	Thale cress	plastid	42.43	21.83
TraesCS3D01G541900.1	Wheat	mitochondrion	32.05	21.82
TraesCS7D01G394600.1	Wheat	cytosol	43.62	21.09
Solyc01g009540.1.1	Tomato	cytosol	5.93	21.05
AT5G43390.1	Thale cress	cytosol, plastid	40.06	21.0
TraesCS1D01G356100.1	Wheat	cytosol, nucleus, peroxisome	43.62	20.88
TraesCS5D01G309300.1	Wheat	plastid	42.73	20.6
Solyc01g009530.1.1	Tomato	cytosol	13.06	20.56
TraesCS5D01G325700.1	Wheat	cytosol, nucleus, plastid	42.14	20.52
TraesCS6D01G071700.1	Wheat	cytosol	41.84	19.86
AT3G24780.1	Thale cress	nucleus	41.84	19.72
VIT_05s0049g00650.t01	Wine grape	cytosol	7.72	19.7
TraesCS5D01G309200.1	Wheat	plastid	31.75	16.98
CDX99561	Canola	nucleus, plastid	5.34	5.68
CDX86853	Canola	endoplasmic reticulum, extracellular	1.78	3.23
CDX69660	Canola	plastid	3.26	3.2

Protein Annotations

EnsemblPlants:TraesCS6D01G138500.1	EnsemblPlantsGene:TraesCS6D01G138500	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
PANTHER:PTHR31373	PANTHER:PTHR31373:SF0	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	SUPFAM:SSF53300
TIGR:cd00198	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:107386644..107387657

Molecular Weight (calculated)

37372.1 Da

IEP (calculated)

10.084

GRAVY (calculated)

-0.366

Length

337 amino acids

Sequence
(BLAST)

001: MISRTSIMLI ARASASVGRC SCRSAARYSS PRSSCRRAWE SVVYTRVASV AMKNYQAVFL KHDAERFNSY LADVKSGKKR IAAGALLPHQ IIESLGEDGD
101: GAGTGVADMQ WRRMVDDMRA LGKLTNCMAV CDVSGSMSGL PMDVCVALGL LVSELTGTPW RGRVITFSER PEIHLITGDT LSEKVDFMRA MEWGMNTNFQ
201: AVFDKILEVA VGGGLPPEKM VRRVFVFSDM EFDQASAHPW ETDYDGEEVL GSRLRVGRAR DSVLEPGVLQ GRAGDVRPER GGAGQRLLQE LAQAVPRRRR
301: HRHPEDHHGE GHRRPGVRQA HRVRLKKTAA KQKLPYV

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.