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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400044378 Potato cytosol 96.23 96.23
VIT_05s0049g00640.t01 Wine grape cytosol 8.79 69.14
CDY60899 Canola cytosol 32.97 68.85
Solyc01g009540.1.1 Tomato cytosol 9.58 64.21
Os09t0499500-01 Rice cytosol 13.19 63.16
CDY22349 Canola plastid 59.03 61.44
AT5G43400.1 Thale cress plastid 61.7 60.0
Solyc01g009530.1.1 Tomato cytosol 20.09 59.81
Bra033679.1-P Field mustard plastid 60.28 59.63
VIT_05s0049g00560.t01 Wine grape cytosol 48.98 59.09
AT5G43390.1 Thale cress cytosol, plastid 58.4 57.85
TraesCS5A01G319700.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole 36.42 55.77
TraesCS6D01G138100.1 Wheat cytosol, nucleus, peroxisome, plastid 54.47 54.47
TraesCS6A01G148700.1 Wheat cytosol 53.69 53.27
TraesCS6B01G176900.1 Wheat cytosol, nucleus, peroxisome, plastid 54.0 53.09
TraesCS7D01G490500.1 Wheat cytosol 40.82 52.74
TraesCS7B01G410900.1 Wheat cytosol, nucleus, plastid 38.62 52.68
GSMUA_AchrUn_... Banana cytosol, plastid 49.14 52.43
TraesCS7D01G496700.1 Wheat cytosol 36.11 52.27
HORVU6Hr1G029540.1 Barley cytosol, nucleus, peroxisome 53.06 51.76
KXG29624 Sorghum cytosol 53.38 51.36
Zm00001d053740_P001 Maize cytosol 52.75 51.3
TraesCS7B01G410500.1 Wheat mitochondrion, plastid 50.55 51.27
Os02t0179600-01 Rice extracellular 52.59 51.07
HORVU7Hr1G112970.1 Barley cytosol, nucleus 51.18 50.62
TraesCS6B01G177100.1 Wheat cytosol 49.76 50.08
Os06t0652100-00 Rice mitochondrion 50.39 50.08
TraesCS6A01G149200.1 Wheat cytosol 51.02 50.08
TraesCS7D01G490900.1 Wheat mitochondrion 50.71 49.92
OQU84313 Sorghum mitochondrion 52.12 49.78
EER88742 Sorghum plastid 50.55 48.64
EER93519 Sorghum mitochondrion 52.9 48.63
EER88676 Sorghum mitochondrion, plastid 53.85 48.51
TraesCS7D01G394600.1 Wheat cytosol 52.43 47.92
TraesCS1B01G367400.1 Wheat cytosol 52.75 47.86
TraesCS7B01G301000.1 Wheat cytosol 52.59 47.86
HORVU6Hr1G013080.3 Barley nucleus, peroxisome 52.75 47.73
TraesCS1A01G354300.1 Wheat cytosol 52.12 47.29
TraesCS5A01G302600.1 Wheat plastid 51.96 47.22
TraesCS5D01G309300.1 Wheat plastid 51.81 47.21
TraesCS1D01G356100.1 Wheat cytosol, nucleus, peroxisome 52.12 47.16
TraesCS5B01G302900.1 Wheat plastid 51.96 47.08
TraesCS7B01G417500.1 Wheat cytosol, plastid 49.76 47.03
TraesCS5D01G325700.1 Wheat cytosol, nucleus, plastid 50.86 46.82
TraesCS6B01G098400.1 Wheat cytosol 52.12 46.76
TraesCS6D01G071700.1 Wheat cytosol 51.96 46.62
TraesCS3D01G541900.1 Wheat mitochondrion 36.11 46.46
TraesCS5B01G319900.1 Wheat cytosol, nucleus, peroxisome 50.55 46.4
TraesCS7A01G503000.1 Wheat mitochondrion 49.76 46.21
Os09t0499400-01 Rice vacuole 43.01 46.13
TraesCS6A01G073400.1 Wheat cytosol, peroxisome, plastid 40.5 45.58
TraesCS7D01G490400.1 Wheat mitochondrion 49.76 45.48
TraesCS7B01G410400.1 Wheat mitochondrion 49.61 45.08
TraesCS5B01G320000.1 Wheat cytosol 52.12 44.8
TraesCS5B01G302800.1 Wheat cytosol, plastid 44.11 44.75
TraesCS5A01G302500.1 Wheat cytosol, plastid 44.27 44.62
TraesCS6D01G138500.1 Wheat mitochondrion, plastid 23.55 44.51
EES01714 Sorghum plastid 43.01 44.34
TraesCS5D01G309200.1 Wheat plastid 43.8 44.29
HORVU5Hr1G079390.2 Barley cytosol, nucleus, plastid 37.05 43.46
KXG37641 Sorghum plastid 42.7 43.17
TraesCS3B01G607400.1 Wheat cytosol 43.64 43.03
Zm00001d045614_P001 Maize mitochondrion 6.12 42.86
HORVU5Hr1G079400.3 Barley cytosol, nucleus, plastid 41.13 41.92
HORVU5Hr1G081560.3 Barley nucleus 43.8 39.69
HORVU7Hr1G112960.3 Barley nucleus 37.68 38.77
HORVU3Hr1G117270.1 Barley cytosol 18.21 35.58
Os12t0141800-01 Rice cytosol, mitochondrion, peroxisome, plastid 8.16 28.42
OQU88215 Sorghum cytosol 17.27 27.5
Protein Annotations
EnsemblPlants:Solyc09g089940.1.1EnsemblPlantsGene:Solyc09g089940.1InterPro:DUF2828InterPro:IPR036465InterPro:UCP015417_vWAInterPro:vWFA_dom_sf
ncoils:CoilPANTHER:PTHR31373PFAM:PF11443PIRSF:PIRSF015417SEG:segSUPFAM:SSF53300
UniParc:UPI000276C959UniProt:K4CW20MapMan:35.2:::
Description
No Description!
Coordinates
chr9:+:69552396..69554309
Molecular Weight (calculated)
72085.2 Da
IEP (calculated)
6.278
GRAVY (calculated)
-0.453
Length
637 amino acids
Sequence
(BLAST)
001: MTAKSLLVGP PALRREPPLS ALTLNDPDTV DIPITGPSDE IKNLDLSKLP LRGLTENNSA TFISSGNPCL DFFFHVVPDT SPDDLIGRLE LAWAHNPLTA
101: LKLICNLRGV RGTGKSDKEG FYAAAFWLHY MHPKTLACNV HAFADFGYFK DLLEILYRIL EGPFVRKMEK EEREKARGRG GGGRGRFKRV SRPSEDGKEK
201: KMKVKKNLEE LKEEIKAEQV KARVLRKEKE VAKAEKAFEK YYSDENYRRL HDKISDFFAE HLREDLEKLN SGKSNEISLA AKWCPTVDSS YDKATLMCES
301: IAKKVFPRES YSEYDGVEEG HYAYRVRNRL RKDVLVPLHK ALELPEVYMS ANKWSSLPYN RVASVAMKNY KGHFFKHDQE RFKAYLEDVK SGKAKIAAGA
401: LLPHEIIGAL EDEDDGEVAE LQWKRMVGDL CKKGKLSDCI AVCDVSGSMS GIPMEVCVAL GVLVSELSEE PWKGKLITFS ESPEMQKVEG DTLKEKTEFV
501: RNMNWGMNTN FQKVFDTILE VAVQGNLSEN QMLKRVFVFS DMEFDQASEN AWETDYQAIQ RKFSEKGYNN VPEIVFWNLR DSRSTPVLEN QNGVALVSGF
601: SKNLLTMFLE GGGVVNPVDV MELAISGEEY QKLVVLD
Best Arabidopsis Sequence Match ( AT5G43400.1 )
(BLAST)
001: MASSTTILLG PPSVAGNSPI IKPIHSPETH ISDENTLISQ TATLNLEEPP PMGLTENFSP TFLSSGNPCL DFFFHIVPDT SPDDLIQRLA ISWSHDPLTT
101: LKLICNLRGV RGTGKSDKEG FYTAAFWLYK NHPKTLALNV PALVDFGYFK DLPEILFRIL EGQNMERGKN RVWRKRVQRK FKGKREKKSE ISGEMEDRIL
201: ENAEEIGGSV DKVKARALRK QREFEKAKKA VTRYNSDANY RLLFDRIADL FAVLLKSDLK YLNSNGLTKI SLASKWCPSV DSSYDKATLI CEAIARRMFP
301: REEYEGIEEA HYAYRIRDRL RKEVLVPLHK ALEFPELFMS AKEWNLLKYN RVPSVAMKNY KKLFEEHDSE RFTEFLEDVK SGKKKIAAGA LLPHQIINQL
401: EDDSGSEVGA EVAELQWARM VDDLAKKGKL KNSLAVCDVS GSMSGTPMEV CVALGLLVSE LSEEPWKGKV ITFSENPELH IVTGSSLREK TQFVREMEWG
501: MNTDFQIVFD RILEVAVENN LTDDQMIKRL FVFSDMEFDD AMANSHSEVS YHLSVEDRLK ISKERSKEKW ETDYEVVQRK YKEKGFQNVP EMVFWNLRDS
601: SATPVVANQK GVAMVSGFSK NLLTLFLEEG GIVNPEDVMW IAIKGEEYKK LVVFD
Arabidopsis Description
AT5g43400/MWF20_9 [Source:UniProtKB/TrEMBL;Acc:Q94AE4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.