Factsheet for HORVU5Hr1G079400.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	nucleus
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G302800.1	Wheat	cytosol, plastid	85.44	85.03
TraesCS5D01G309200.1	Wheat	plastid	84.48	83.81
TraesCS5A01G302500.1	Wheat	cytosol, plastid	81.44	80.54
Os09t0499400-01	Rice	vacuole	58.08	61.11
KXG37641	Sorghum	plastid	60.16	59.68
EES01714	Sorghum	plastid	56.96	57.61
HORVU3Hr1G117270.1	Barley	cytosol	29.92	57.36
VIT_05s0049g00640.t01	Wine grape	cytosol	5.6	43.21
PGSC0003DMT400030583	Potato	cytosol, vacuole	6.56	41.84
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	40.8	41.2
Solyc09g089940.1.1	Tomato	cytosol	41.92	41.13
PGSC0003DMT400044378	Potato	cytosol	41.76	40.97
HORVU6Hr1G029540.1	Barley	cytosol, nucleus, peroxisome	42.72	40.89
CDY22349	Canola	plastid	40.0	40.85
HORVU7Hr1G112970.1	Barley	cytosol, nucleus	41.92	40.68
PGSC0003DMT400070342	Potato	cytosol	25.6	40.3
Solyc01g009530.1.1	Tomato	cytosol	13.76	40.19
CDX69660	Canola	plastid	21.92	39.83
HORVU5Hr1G079390.2	Barley	cytosol, nucleus, plastid	33.92	39.04
PGSC0003DMT400030584	Potato	cytosol, plastid	38.08	38.89
KRH75085	Soybean	cytosol, plastid	40.0	38.7
CDY09774	Canola	cytosol, plastid	40.0	38.52
Bra033679.1-P	Field mustard	plastid	39.68	38.51
HORVU6Hr1G013080.3	Barley	nucleus, peroxisome	42.88	38.07
Bra008847.1-P	Field mustard	nucleus, plastid	40.48	37.99
VIT_05s0049g00560.t01	Wine grape	cytosol	32.0	37.88
AT5G43390.1	Thale cress	cytosol, plastid	38.88	37.79
CDY60899	Canola	cytosol	18.4	37.7
AT5G43400.1	Thale cress	plastid	38.56	36.79
AT5G13210.1	Thale cress	cytosol, plastid	39.04	36.26
CDX86854	Canola	cytosol	16.64	35.86
Bra035287.1-P	Field mustard	cytosol	32.8	34.57
CDX69659	Canola	cytosol	15.2	34.42
AT3G24780.1	Thale cress	nucleus	38.56	33.71
HORVU5Hr1G081560.3	Barley	nucleus	37.76	33.57
HORVU7Hr1G112960.3	Barley	nucleus	30.08	30.37
PGSC0003DMT400094367	Potato	cytosol	5.12	30.19
CDX99560	Canola	cytosol	6.56	30.15
CDX99561	Canola	nucleus, plastid	14.56	28.71
CDX86853	Canola	endoplasmic reticulum, extracellular	8.16	27.42
VIT_05s0049g00650.t01	Wine grape	cytosol	5.12	24.24
Solyc01g009540.1.1	Tomato	cytosol	3.04	20.0

Protein Annotations

EnsemblPlants:HORVU5Hr1G079400.3	EnsemblPlantsGene:HORVU5Hr1G079400	InterPro:DUF2828	InterPro:UCP015417_vWA	PANTHER:PTHR31373	PANTHER:PTHR31373:SF9
PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	UniParc:UPI000B479DE0	UniProt:A0A287RXU2	MapMan:35.2

Description

No Description!

Coordinates

chrchr5H:+:556783621..556785495

Molecular Weight (calculated)

69077.6 Da

IEP (calculated)

10.189

GRAVY (calculated)

-0.377

Length

625 amino acids

Sequence
(BLAST)

001: MAPAAALLGP PIAIVDTDMA DRKPKAKPTP KKPKRALYRG DSSSSDDDSE GYDSDADPVS RPPKAVGKAL AYASSGDPCV DFFFQVVPGG TAAADVAALL
101: SVAWAGDART ALRLVCHLRG VRGLGKSDRE GFYAAALWMH ANHPRTLAAN LATFARFGCL KDLPEIVYRI LHGPRDERKD GDDDSSRVHR RGGSRNNKRR
201: CVGGGAEAAK ARRQKETEHA QVVLSRYDSD ESFRFLYDSV AELFAELLKS DLEHLRSGDT AKIGLAAKWC PSLRSSYDRS TLLCEAIARR VFPRDSSPEY
301: LGIPDKHYAY RVRNRLRREV HVPLRKVLEL PEVYMSAGKW DELPYARVAS RAMRQYKLAF DKHDKSGVAG FYDEVRAGLT RIPADAVLPH EILAAALKGE
401: HDESAELQWR RMVSSLVSEG RLSNCIAMCA LSSSVEKPPA SAAIALGLLI SELSQDPWKG RVITFDATHQ LHKVRGASLV DKLRTLAAVR AQKGANLQAV
501: FNKILNVAVA GALSKDMMVK RVFVLSDMEF DGWVGGEAWV SEHEAIKKKF AAEGFGVPEV VFWNVGTSKQ NFGFRFAFFS GPGRNRRISE FRIFFGKNRT
601: KSQIQKLKTG TKTGRKLNEK RPKFD

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.