Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0499500-01 | Rice | cytosol | 57.35 | 58.65 |
| Solyc01g009540.1.1 | Tomato | cytosol | 36.76 | 52.63 |
| CDX86854 | Canola | cytosol | 91.91 | 43.1 |
| VIT_05s0049g00650.t01 | Wine grape | cytosol | 37.5 | 38.64 |
| PGSC0003DMT400030583 | Potato | cytosol, vacuole | 27.21 | 37.76 |
| CDX69659 | Canola | cytosol | 74.26 | 36.59 |
| CDY60899 | Canola | cytosol | 61.03 | 27.21 |
| TraesCS5A01G319700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 53.68 | 17.55 |
| TraesCS7D01G496700.1 | Wheat | cytosol | 51.47 | 15.91 |
| CDY09774 | Canola | cytosol, plastid | 74.26 | 15.56 |
| TraesCS7D01G490500.1 | Wheat | cytosol | 55.88 | 15.42 |
| PGSC0003DMT400030584 | Potato | cytosol, plastid | 66.18 | 14.71 |
| AT5G13210.1 | Thale cress | cytosol, plastid | 72.06 | 14.56 |
| TraesCS7B01G410900.1 | Wheat | cytosol, nucleus, plastid | 49.26 | 14.35 |
| KRH75085 | Soybean | cytosol, plastid | 65.44 | 13.78 |
| TraesCS6D01G138500.1 | Wheat | mitochondrion, plastid | 33.82 | 13.65 |
| CDY22349 | Canola | plastid | 59.56 | 13.24 |
| TraesCS6A01G073400.1 | Wheat | cytosol, peroxisome, plastid | 53.68 | 12.9 |
| TraesCS6B01G177100.1 | Wheat | cytosol | 58.82 | 12.64 |
| TraesCS6A01G148700.1 | Wheat | cytosol | 58.82 | 12.46 |
| TraesCS6D01G138100.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 58.09 | 12.4 |
| TraesCS6B01G176900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 58.82 | 12.35 |
| HORVU7Hr1G112970.1 | Barley | cytosol, nucleus | 58.09 | 12.27 |
| TraesCS7B01G410500.1 | Wheat | mitochondrion, plastid | 56.62 | 12.26 |
| EER88742 | Sorghum | plastid | 59.56 | 12.24 |
| Zm00001d053740_P001 | Maize | cytosol | 58.82 | 12.21 |
| TraesCS6A01G149200.1 | Wheat | cytosol | 58.09 | 12.17 |
| HORVU6Hr1G029540.1 | Barley | cytosol, nucleus, peroxisome | 58.09 | 12.1 |
| Os02t0179600-01 | Rice | extracellular | 58.09 | 12.04 |
| KXG29624 | Sorghum | cytosol | 58.09 | 11.93 |
| TraesCS7D01G490900.1 | Wheat | mitochondrion | 56.62 | 11.9 |
| TraesCS3D01G541900.1 | Wheat | mitochondrion | 42.65 | 11.72 |
| Os06t0652100-00 | Rice | mitochondrion | 54.41 | 11.54 |
| OQU84313 | Sorghum | mitochondrion | 55.88 | 11.39 |
| AT3G24780.1 | Thale cress | nucleus | 58.82 | 11.19 |
| TraesCS7A01G503000.1 | Wheat | mitochondrion | 55.88 | 11.08 |
| TraesCS1A01G354300.1 | Wheat | cytosol | 55.88 | 10.83 |
| TraesCS5B01G302900.1 | Wheat | plastid | 55.88 | 10.81 |
| TraesCS1D01G356100.1 | Wheat | cytosol, nucleus, peroxisome | 55.88 | 10.8 |
| TraesCS7B01G301000.1 | Wheat | cytosol | 55.15 | 10.71 |
| TraesCS5A01G302600.1 | Wheat | plastid | 55.15 | 10.7 |
| EER93519 | Sorghum | mitochondrion | 54.41 | 10.68 |
| TraesCS7D01G394600.1 | Wheat | cytosol | 54.41 | 10.62 |
| TraesCS7D01G490400.1 | Wheat | mitochondrion | 54.41 | 10.62 |
| TraesCS5D01G309300.1 | Wheat | plastid | 54.41 | 10.59 |
| TraesCS7B01G410400.1 | Wheat | mitochondrion | 54.41 | 10.56 |
| TraesCS1B01G367400.1 | Wheat | cytosol | 54.41 | 10.54 |
| HORVU6Hr1G013080.3 | Barley | nucleus, peroxisome | 54.41 | 10.51 |
| EER88676 | Sorghum | mitochondrion, plastid | 54.41 | 10.47 |
| TraesCS7B01G417500.1 | Wheat | cytosol, plastid | 51.47 | 10.39 |
| TraesCS6B01G098400.1 | Wheat | cytosol | 53.68 | 10.28 |
| TraesCS6D01G071700.1 | Wheat | cytosol | 53.68 | 10.28 |
| TraesCS5D01G325700.1 | Wheat | cytosol, nucleus, plastid | 52.21 | 10.26 |
| TraesCS5B01G319900.1 | Wheat | cytosol, nucleus, peroxisome | 52.21 | 10.23 |
| GSMUA_AchrUn_... | Banana | cytosol, plastid | 44.85 | 10.22 |
| HORVU5Hr1G081560.3 | Barley | nucleus | 50.74 | 9.82 |
| TraesCS5B01G302800.1 | Wheat | cytosol, plastid | 44.85 | 9.71 |
| TraesCS5D01G309200.1 | Wheat | plastid | 44.85 | 9.68 |
| TraesCS5A01G302500.1 | Wheat | cytosol, plastid | 44.12 | 9.49 |
| EES01714 | Sorghum | plastid | 42.65 | 9.39 |
| TraesCS5B01G320000.1 | Wheat | cytosol | 50.74 | 9.31 |
| KXG37641 | Sorghum | plastid | 42.65 | 9.21 |
| Os09t0499400-01 | Rice | vacuole | 39.71 | 9.09 |
| HORVU7Hr1G112960.3 | Barley | nucleus | 41.18 | 9.05 |
| TraesCS3B01G607400.1 | Wheat | cytosol | 41.91 | 8.82 |
| HORVU5Hr1G079400.3 | Barley | cytosol, nucleus, plastid | 30.15 | 6.56 |
| OQU88215 | Sorghum | cytosol | 16.18 | 5.5 |
| Zm00001d045614_P001 | Maize | mitochondrion | 1.47 | 2.2 |
| Os12t0141800-01 | Rice | cytosol, mitochondrion, peroxisome, plastid | 2.21 | 1.64 |
| HORVU3Hr1G117270.1 | Barley | cytosol | 2.21 | 0.92 |
| CDX86853 | Canola | endoplasmic reticulum, extracellular | 0.74 | 0.54 |
| Solyc01g009530.1.1 | Tomato | cytosol | 0.74 | 0.47 |
| CDX99561 | Canola | nucleus, plastid | 0.74 | 0.32 |
| HORVU5Hr1G079390.2 | Barley | cytosol, nucleus, plastid | 0.74 | 0.18 |
| CDX69660 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX99560 | EnsemblPlantsGene:GSBRNA2T00108019001 | InterPro:DUF2828 | InterPro:UCP015417_vWA | PANTHER:PTHR31373 | PFAM:PF11443 |
| PIRSF:PIRSF015417 | ProteinID:CDX99560 | ProteinID:CDX99560.1 | UniParc:UPI0004EDC977 | MapMan:35.2 | : |
Description
BnaC09g24320D
Coordinates
chrLK031911:-:944737..945171
Molecular Weight (calculated)
15358.3 Da
IEP (calculated)
4.287
GRAVY (calculated)
-0.173
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWGANTDFQ KVFDLILKVA VEGKLKPEGM IKRVFVFSDM EFDEASSETS SWETNYQVIV SKYKERGYGV PEIVFWNLRD SKSTPVARSD KGVALVSGFS
101: KNLIKMFLDN DGEIDPMTIM DAVISGPEYN ELVVID
101: KNLIKMFLDN DGEIDPMTIM DAVISGPEYN ELVVID
001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD
Arabidopsis Description
AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.