Factsheet for TraesCS6B01G176900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

plastid 2
nucleus 1
mitochondrion 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G138100.1	Wheat	cytosol, nucleus, peroxisome, plastid	92.44	94.03
TraesCS6A01G148700.1	Wheat	cytosol	92.44	93.3
HORVU6Hr1G029540.1	Barley	cytosol, nucleus, peroxisome	87.5	86.83
Os02t0179600-01	Rice	extracellular	77.47	76.52
KXG29624	Sorghum	cytosol	76.23	74.62
Zm00001d053740_P001	Maize	cytosol	74.85	74.05
TraesCS6B01G177100.1	Wheat	cytosol	72.22	73.93
TraesCS7B01G410900.1	Wheat	cytosol, nucleus, plastid	49.85	69.16
TraesCS7B01G410500.1	Wheat	mitochondrion, plastid	65.9	67.99
PGSC0003DMT400094367	Potato	cytosol	10.49	64.15
CDX86854	Canola	cytosol	26.85	60.0
CDX69659	Canola	cytosol	25.31	59.42
CDX99560	Canola	cytosol	12.35	58.82
TraesCS7B01G410400.1	Wheat	mitochondrion	62.65	57.92
CDY60899	Canola	cytosol	27.16	57.7
Solyc01g009540.1.1	Tomato	cytosol	8.18	55.79
GSMUA_AchrUn_...	Banana	cytosol, plastid	51.23	55.61
VIT_05s0049g00640.t01	Wine grape	cytosol	6.94	55.56
Solyc09g089940.1.1	Tomato	cytosol	53.09	54.0
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	51.08	53.47
PGSC0003DMT400044378	Potato	cytosol	52.47	53.38
CDY22349	Canola	plastid	49.07	51.96
KRH75085	Soybean	cytosol, plastid	51.7	51.86
PGSC0003DMT400070342	Potato	cytosol	31.48	51.39
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.72	51.02
CDY09774	Canola	cytosol, plastid	50.77	50.69
PGSC0003DMT400030584	Potato	cytosol, plastid	47.53	50.33
Bra033679.1-P	Field mustard	plastid	49.38	49.69
TraesCS1B01G367400.1	Wheat	cytosol	53.7	49.57
Bra035287.1-P	Field mustard	cytosol	45.22	49.41
TraesCS7B01G417500.1	Wheat	cytosol, plastid	51.23	49.26
Bra008847.1-P	Field mustard	nucleus, plastid	50.46	49.1
AT5G43390.1	Thale cress	cytosol, plastid	48.61	48.99
TraesCS5B01G302900.1	Wheat	plastid	52.93	48.79
VIT_05s0049g00650.t01	Wine grape	cytosol	9.88	48.48
AT5G13210.1	Thale cress	cytosol, plastid	50.15	48.29
AT5G43400.1	Thale cress	plastid	48.77	48.24
VIT_05s0049g00560.t01	Wine grape	cytosol	39.2	48.11
TraesCS5B01G319900.1	Wheat	cytosol, nucleus, peroxisome	51.39	47.98
TraesCS7B01G301000.1	Wheat	cytosol	51.23	47.43
TraesCS6B01G098400.1	Wheat	cytosol	51.7	47.18
TraesCS5B01G302800.1	Wheat	cytosol, plastid	45.52	46.97
Solyc01g009530.1.1	Tomato	cytosol	15.43	46.73
TraesCS5B01G320000.1	Wheat	cytosol	52.78	46.15
TraesCS3B01G607400.1	Wheat	cytosol	45.68	45.82
CDX69660	Canola	plastid	23.3	43.9
AT3G24780.1	Thale cress	nucleus	47.53	43.08
CDX99561	Canola	nucleus, plastid	16.05	32.81
CDX86853	Canola	endoplasmic reticulum, extracellular	8.8	30.65

Protein Annotations

EnsemblPlants:TraesCS6B01G176900.1	EnsemblPlantsGene:TraesCS6B01G176900	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
PANTHER:PTHR31373	PANTHER:PTHR31373:SF3	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	SUPFAM:SSF53300
TIGR:cd00198	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:194424173..194426119

Molecular Weight (calculated)

69780.0 Da

IEP (calculated)

7.328

GRAVY (calculated)

-0.125

Length

648 amino acids

Sequence
(BLAST)

001: MAATAASALV GPPEAATAVG AAAPTGDAFV DLLDASFNKA TVGAGKALTE NSSPTFVSSG DPCLDFFFHV VPGTPAASVA SLLAAAWAAD PVTALRLVAN
101: LRGVRGSGKS DREGFYAAAL WLHARHPATL ARNAASVAAF GYLKDLPELL HRIVHGGKST RTPGKKARLE AEGGGFVRRG GRGRGRGRWS GGSSGLKLRS
201: EDHAPAPPDG ASEERVAASL ERDRELAAAA AVSRRAKRAE AAARALEMYS RDSTYRSLHD RTADLFAELL AEDMRKLSVG NVKDFSLAAK WCPSLDSSYD
301: RSTLLCEAIA RRLFPRGSSS ELGDDLPDAH YAYRARERLR RAAIVPLRAA LKLPEVFISA RAWESVVYTR VASVAMKNYK DLFLKHDAER FNAYLADVKS
401: GKKRIAAGAL LPHQIIESLG EDGDDGGVAD LQWQRMVDDM RALGKLNSCV AVCDVSGSMS GLPMDVCIAL GILVSELTDD PWRGRVITFS EQPNIHMIKG
501: DTLSEKTDFV RNMDWGMNTD FQAVFDKILE VAVDAGLPAE KMVRRVFVFS DMEFDQASAN PWETDYEAIV RKFSEAGYGA AVPEIVFWNL RDSKAVPVMS
601: GQKGVALVSG FSKNLLKLFL DGGGTFTPRV VMEKAIAGPE YDQLAVFD

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.