Factsheet for TraesCS1B01G367400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G356100.1	Wheat	cytosol, nucleus, peroxisome	95.01	94.74
TraesCS1A01G354300.1	Wheat	cytosol	92.88	92.88
TraesCS6B01G098400.1	Wheat	cytosol	81.91	80.99
Os09t0499500-01	Rice	cytosol	15.24	80.45
TraesCS5B01G302900.1	Wheat	plastid	80.34	80.23
TraesCS7B01G417500.1	Wheat	cytosol, plastid	72.93	75.96
TraesCS5B01G319900.1	Wheat	cytosol, nucleus, peroxisome	74.22	75.07
TraesCS7B01G301000.1	Wheat	cytosol	74.5	74.71
OQU84313	Sorghum	mitochondrion	66.52	70.02
TraesCS5B01G320000.1	Wheat	cytosol	73.65	69.77
EER88676	Sorghum	mitochondrion, plastid	68.09	67.61
EER93519	Sorghum	mitochondrion	65.95	66.81
CDX86854	Canola	cytosol	24.36	58.97
VIT_05s0049g00640.t01	Wine grape	cytosol	6.7	58.02
CDX69659	Canola	cytosol	22.65	57.61
PGSC0003DMT400094367	Potato	cytosol	8.55	56.6
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.69	55.1
CDY60899	Canola	cytosol	23.93	55.08
CDX99560	Canola	cytosol	10.54	54.41
TraesCS6B01G176900.1	Wheat	cytosol, nucleus, peroxisome, plastid	49.57	53.7
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	47.15	53.47
Solyc09g089940.1.1	Tomato	cytosol	47.86	52.75
TraesCS7B01G410500.1	Wheat	mitochondrion, plastid	46.58	52.07
TraesCS7B01G410900.1	Wheat	cytosol, nucleus, plastid	34.47	51.82
PGSC0003DMT400044378	Potato	cytosol	47.01	51.81
TraesCS6B01G177100.1	Wheat	cytosol	46.44	51.5
Zm00001d045614_P001	Maize	mitochondrion	6.55	50.55
CDY09774	Canola	cytosol, plastid	46.72	50.54
PGSC0003DMT400030584	Potato	cytosol, plastid	44.02	50.49
PGSC0003DMT400070342	Potato	cytosol	28.49	50.38
Solyc01g009530.1.1	Tomato	cytosol	15.24	50.0
Bra008847.1-P	Field mustard	nucleus, plastid	47.44	50.0
VIT_05s0049g00560.t01	Wine grape	cytosol	37.46	49.81
Bra035287.1-P	Field mustard	cytosol	42.02	49.75
CDY22349	Canola	plastid	43.3	49.67
Bra033679.1-P	Field mustard	plastid	45.01	49.07
KRH75085	Soybean	cytosol, plastid	45.01	48.92
AT5G43390.1	Thale cress	cytosol, plastid	44.44	48.52
Solyc01g009540.1.1	Tomato	cytosol	6.55	48.42
AT5G13210.1	Thale cress	cytosol, plastid	46.3	48.29
AT5G43400.1	Thale cress	plastid	44.44	47.63
TraesCS7B01G410400.1	Wheat	mitochondrion	45.3	45.36
TraesCS5B01G302800.1	Wheat	cytosol, plastid	40.17	44.9
TraesCS3B01G607400.1	Wheat	cytosol	40.88	44.43
CDX69660	Canola	plastid	21.37	43.6
VIT_05s0049g00650.t01	Wine grape	cytosol	7.98	42.42
AT3G24780.1	Thale cress	nucleus	43.16	42.38
CDX99561	Canola	nucleus, plastid	15.1	33.44
CDX86853	Canola	endoplasmic reticulum, extracellular	6.98	26.34

Protein Annotations

EnsemblPlants:TraesCS1B01G367400.1	EnsemblPlantsGene:TraesCS1B01G367400	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
ncoils:Coil	PANTHER:PTHR31373	PANTHER:PTHR31373:SF2	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg
SUPFAM:SSF53300	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:598190659..598192767

Molecular Weight (calculated)

77867.4 Da

IEP (calculated)

9.040

GRAVY (calculated)

-0.251

Length

702 amino acids

Sequence
(BLAST)

001: MATESEPAAA PRLLLGPPLI RAARPSPDSG AAAGDALHPF VDLLDAAFNA PSEAALKAAL KPRRALTENC SATYANSGNP CLDFFFQVVP DTPADRVRQL
101: LAAAWAQDSL TALRLACNLR GVRGTGKSDK EGFYAAALWM HEHHPRTLAC NVAALAEFGY LKDFPELLFR LLRGPDVRAV AKAGAEADKA RRKAKGLASQ
201: REELRARLAS RKLASELATV PAKATFDYFL SAALSKFGKG SKPVEVVPVQ EPAEVQKPEA MEVDQKKKTA ARRMSKKVRT VAKLAVQSLE TYYGDRAYRF
301: LFDAVADFFA ALLTSDLQQL ASGGKKRKIG LAAKWCPTPG SSFDRTTLLC EAIARRLFPR DSDPELTQLS EEHYAYRALH RLRREVLVPL RKVLELPEVY
401: MSAQRWSELP YTRVASVAMR RYKSLFKKHD EERFDKYLED VEAGKAKIAA GALLPHEIAA AAYRGQDDNV SELQWRRMVD DLRSKGSLHN CISVCDVSAS
501: MSGTPMEVCI ALGVLTSELS EEPWAGKVIT FSENPEIHLI KGKTLRQKMD FVRRMHWGGS TNFQGVFDQI LRTAVEASLA PEKMIRTVFV YSDMEFNMAS
601: GSAYAAYYSR RESVPWETDY EVICKKFRDA GYGDVVPQII FWNLRDSQST PVTSTQPGVA MVSGFSKNFL KIFLKNDGVV NPEAIMMEAI AGEEYQKLAV
701: YD

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.