Factsheet for TraesCS5B01G319900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G319700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	56.48	94.23
TraesCS5D01G325700.1	Wheat	cytosol, nucleus, plastid	87.32	87.57
Os09t0499500-01	Rice	cytosol	15.27	79.7
TraesCS5B01G320000.1	Wheat	cytosol	82.13	76.92
TraesCS6B01G098400.1	Wheat	cytosol	76.22	74.51
TraesCS5B01G302900.1	Wheat	plastid	75.22	74.25
TraesCS1B01G367400.1	Wheat	cytosol	75.07	74.22
TraesCS7B01G301000.1	Wheat	cytosol	71.04	70.43
TraesCS7B01G417500.1	Wheat	cytosol, plastid	68.01	70.03
OQU84313	Sorghum	mitochondrion	64.41	67.02
HORVU5Hr1G081560.3	Barley	nucleus	67.58	66.71
EER88676	Sorghum	mitochondrion, plastid	65.99	64.78
EER93519	Sorghum	mitochondrion	64.27	64.36
VIT_05s0049g00640.t01	Wine grape	cytosol	6.63	56.79
PGSC0003DMT400094367	Potato	cytosol	8.5	55.66
CDX86854	Canola	cytosol	22.77	54.48
CDX69659	Canola	cytosol	21.47	53.99
CDY60899	Canola	cytosol	23.49	53.44
CDX99560	Canola	cytosol	10.23	52.21
TraesCS6B01G176900.1	Wheat	cytosol, nucleus, peroxisome, plastid	47.98	51.39
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	45.82	51.37
Solyc09g089940.1.1	Tomato	cytosol	46.4	50.55
TraesCS7B01G410500.1	Wheat	mitochondrion, plastid	45.53	50.32
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.06	50.0
TraesCS7B01G410900.1	Wheat	cytosol, nucleus, plastid	33.57	49.89
PGSC0003DMT400044378	Potato	cytosol	45.68	49.76
PGSC0003DMT400070342	Potato	cytosol	28.39	49.62
CDY09774	Canola	cytosol, plastid	45.97	49.15
TraesCS6B01G177100.1	Wheat	cytosol	44.81	49.13
Solyc01g009530.1.1	Tomato	cytosol	14.99	48.6
PGSC0003DMT400030584	Potato	cytosol, plastid	42.65	48.37
CDY22349	Canola	plastid	42.36	48.04
Bra008847.1-P	Field mustard	nucleus, plastid	45.97	47.9
KRH75085	Soybean	cytosol, plastid	44.38	47.68
VIT_05s0049g00560.t01	Wine grape	cytosol	36.02	47.35
AT5G13210.1	Thale cress	cytosol, plastid	45.1	46.51
Bra033679.1-P	Field mustard	plastid	43.08	46.43
Bra035287.1-P	Field mustard	cytosol	39.63	46.37
TraesCS5B01G302800.1	Wheat	cytosol, plastid	41.93	46.34
Zm00001d045614_P001	Maize	mitochondrion	6.05	46.15
AT5G43390.1	Thale cress	cytosol, plastid	42.65	46.03
TraesCS3B01G607400.1	Wheat	cytosol	42.51	45.67
Solyc01g009540.1.1	Tomato	cytosol	6.2	45.26
AT5G43400.1	Thale cress	plastid	42.51	45.04
TraesCS7B01G410400.1	Wheat	mitochondrion	44.96	44.51
CDX69660	Canola	plastid	21.47	43.31
VIT_05s0049g00650.t01	Wine grape	cytosol	7.93	41.67
AT3G24780.1	Thale cress	nucleus	42.36	41.12
CDX99561	Canola	nucleus, plastid	14.99	32.81
CDX86853	Canola	endoplasmic reticulum, extracellular	7.35	27.42

Protein Annotations

EnsemblPlants:TraesCS5B01G319900.1	EnsemblPlantsGene:TraesCS5B01G319900	InterPro:DUF2828	InterPro:UCP015417_vWA	PANTHER:PTHR31373	PANTHER:PTHR31373:SF2
PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr5B:+:505275308..505277587

Molecular Weight (calculated)

77349.9 Da

IEP (calculated)

9.871

GRAVY (calculated)

-0.193

Length

694 amino acids

Sequence
(BLAST)

001: MAIETEPAAP PGLLGPPVVR GARPPADPAL HPFLDLLDAA IKAALTLTPW RARALTPWRA LTENYSLAYA NSGNPCLDFF FQVVPDTPAE RVRGLLAAAW
101: AHDALTALKL ACNLRGVRGT GKSDKEGFYA AALWMHEHNP RTLACNIAAL AEFGYLKDFP ELLFRLIHGP DVRKVAKAAA EAEKARKKEK ALGHRRAALR
201: TRLASRRRRR RLPPLPPKPT FGDFLAAALW KSMQSKALVV EAVPVSVAVP EAQKPEVMEV DQKKTSPRKP EMSKKVRKVA KLAVQSLKTY YGDRAYRFLF
301: DAVADFFAAL LTSDLEQLSH GGKTMKIGLA AKWCPTPGSS FDRTTLLCEA IARRLFPRDS DPEYAQLSDE HYTYCALHRL RRQVLVPLRK VLKLPEVYMS
401: AQRWSELPYT RVASVAMRRY KFLFKKHDEV RFGRYLDDVK AGKAKISAGA LLPHEIAAAA LRGQEDDVSE LQWRRMVEDL RSKGLLRNCI SVCDVSASMD
501: GKPMEVCIAL GVLTSELSER PWKGKVITFH SRPSIHLIKG NTLREKMKFV ERLEWGGSTN FQGVFDQILC TAVDAGLAPE KMIRTVFVYS DMEFNMASGA
601: YYGGEPSWDS DYEVICKKFR AAGYGDVVPQ IVFWNLRDSS SMPVTSTQPG VAMVSGFSKN ILKIFLQNDG VVNPEAIMMQ AIAGDEYQKL AVFD

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.