CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0499500-01	Rice	cytosol	16.12	85.71
TraesCS5A01G319700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	46.53	79.09
OQU84313	Sorghum	mitochondrion	69.87	74.06
EER93519	Sorghum	mitochondrion	71.99	73.45
TraesCS7D01G496700.1	Wheat	cytosol	45.69	73.41
TraesCS5D01G309300.1	Wheat	plastid	68.88	69.67
TraesCS5A01G302600.1	Wheat	plastid	68.6	69.19
TraesCS5B01G302900.1	Wheat	plastid	68.46	68.85
TraesCS1A01G354300.1	Wheat	cytosol	67.89	68.38
TraesCS6A01G073400.1	Wheat	cytosol, peroxisome, plastid	54.6	68.2
TraesCS1B01G367400.1	Wheat	cytosol	67.61	68.09
HORVU6Hr1G013080.3	Barley	nucleus, peroxisome	67.47	67.76
TraesCS6B01G098400.1	Wheat	cytosol	67.89	67.61
TraesCS6D01G071700.1	Wheat	cytosol	67.89	67.61
TraesCS1D01G356100.1	Wheat	cytosol, nucleus, peroxisome	67.04	67.33
TraesCS5D01G325700.1	Wheat	cytosol, nucleus, plastid	65.77	67.2
TraesCS7B01G417500.1	Wheat	cytosol, plastid	63.93	67.06
TraesCS7D01G394600.1	Wheat	cytosol	65.91	66.86
TraesCS5B01G319900.1	Wheat	cytosol, nucleus, peroxisome	64.78	65.99
TraesCS7B01G301000.1	Wheat	cytosol	65.06	65.71
TraesCS5B01G320000.1	Wheat	cytosol	66.76	63.7
PGSC0003DMT400094367	Potato	cytosol	9.48	63.21
HORVU5Hr1G079390.2	Barley	cytosol, nucleus, plastid	47.38	61.69
CDX69659	Canola	cytosol	23.62	60.51
CDX86854	Canola	cytosol	23.76	57.93
VIT_05s0049g00640.t01	Wine grape	cytosol	6.51	56.79
CDY60899	Canola	cytosol	24.19	56.07
Solyc01g009540.1.1	Tomato	cytosol	7.5	55.79
HORVU5Hr1G081560.3	Barley	nucleus	55.02	55.33
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	47.67	54.44
CDX99560	Canola	cytosol	10.47	54.41
KXG29624	Sorghum	cytosol	50.49	53.93
Solyc09g089940.1.1	Tomato	cytosol	48.51	53.85
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.36	53.06
PGSC0003DMT400044378	Potato	cytosol	47.81	53.06
CDY09774	Canola	cytosol, plastid	48.23	52.54
PGSC0003DMT400070342	Potato	cytosol	29.42	52.39
PGSC0003DMT400030584	Potato	cytosol, plastid	44.84	51.8
EER88742	Sorghum	plastid	48.23	51.51
Solyc01g009530.1.1	Tomato	cytosol	15.28	50.47
Bra008847.1-P	Field mustard	nucleus, plastid	47.52	50.45
KRH75085	Soybean	cytosol, plastid	45.4	49.69
CDY22349	Canola	plastid	43.0	49.67
VIT_05s0049g00560.t01	Wine grape	cytosol	36.78	49.24
Bra035287.1-P	Field mustard	cytosol	41.02	48.9
AT5G13210.1	Thale cress	cytosol, plastid	46.39	48.74
Bra033679.1-P	Field mustard	plastid	43.85	48.14
AT5G43400.1	Thale cress	plastid	44.55	48.09
EES01714	Sorghum	plastid	42.01	48.06
AT5G43390.1	Thale cress	cytosol, plastid	43.0	47.28
VIT_05s0049g00650.t01	Wine grape	cytosol	8.63	46.21
Zm00001d045614_P001	Maize	mitochondrion	5.94	46.15
KXG37641	Sorghum	plastid	41.02	46.03
CDX69660	Canola	plastid	21.07	43.31
AT3G24780.1	Thale cress	nucleus	43.0	42.52
OQU88215	Sorghum	cytosol	20.51	36.25
CDX99561	Canola	nucleus, plastid	15.56	34.7
CDX86853	Canola	endoplasmic reticulum, extracellular	7.36	27.96

Protein Annotations

MapMan:35.2	UniProt:C5Z683	InterPro:DUF2828	EnsemblPlants:EER88676	ProteinID:EER88676	ProteinID:EER88676.2
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0042626
GO:GO:0055085	InterPro:IPR036465	PFAM:PF11443	PIRSF:PIRSF015417	PANTHER:PTHR31373	PANTHER:PTHR31373:SF2
EnsemblPlantsGene:SORBI_3010G196700	SUPFAM:SSF53300	InterPro:UCP015417_vWA	UniParc:UPI0007F306B7	SEG:seg	InterPro:vWFA_dom_sf

Description

hypothetical protein

Coordinates

chr10:+:53992529..53994652

Molecular Weight (calculated)

78300.5 Da

IEP (calculated)

8.344

GRAVY (calculated)

-0.331

Length

707 amino acids

Sequence
(BLAST)

001: MAPVLLGPPA IRGARPPPSA VADAEAPASH PFLDLLDAGF NAPDPDAAAK AAEPPRKART DNYSATYASS GNPCVDLFFQ VVPDTAPDRV RALVAAAWDH
101: DALTALKLVA NLRGVRGTGK SDKDGFYAAA LWMHERHPRT LACNVPALAE FGYFKDFPEL LYRLIHGPDV RKLAKAKADA DKARRAMKLR VAKLAERRTR
201: AREDRAAVVT VPSKPTLADY FTATLARTKS KSSKRGRKAA AVAPVDDAEA PESDQAMEVE QEPEPEAMEV EQKPEAPQEE EVTGKMKKKA TKKVPKAARL
301: AVNALETYYS DRAYRFLFDC VAEFFADLLA SDLKQLAPGG KKKKIGLAAK WCPTPGSSFD RTTLLCEAIA RRLFPRDSNP DYADLSEEHY AYSVLHRLRR
401: EVLVPLRKVL ELPEVYMSAQ RWSDLPYTRV ASVAMRRYKF LFKKHDEARF GKYLEDVEAG KAKIAAGALL PHEIAAAAYR GEADAVSELQ WRRMVDDLRK
501: KGSLSNCIAV CDVSGSMTGT PMEVCVALGL LISDLSEEPW AGRVITFSES PEIHTIKGET LEEKLSFVRT MNWGFNTNFQ AVFDRILSTA VDARLPQEKM
601: IRTVFVFSDM EFDQASANHR WETDYEAINR KFRDAGYGDV VPQIVFWNLR DSRSTPVTST QPGVAMVSGF SKNLVKLFLE NDGVVNPEAV MAQAIAGKEY
701: QKLAVFD

Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)

001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD

Arabidopsis Description

AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.