CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37641	Sorghum	plastid	69.09	67.78
TraesCS3D01G541900.1	Wheat	mitochondrion	52.59	65.66
TraesCS5D01G309200.1	Wheat	plastid	65.21	63.97
TraesCS5B01G302800.1	Wheat	cytosol, plastid	64.72	63.69
TraesCS5A01G302500.1	Wheat	cytosol, plastid	64.89	63.45
Os09t0499400-01	Rice	vacuole	60.68	63.13
TraesCS3B01G607400.1	Wheat	cytosol	63.92	61.15
HORVU5Hr1G079400.3	Barley	cytosol, nucleus, plastid	57.61	56.96
PGSC0003DMT400094367	Potato	cytosol	8.41	49.06
HORVU3Hr1G117270.1	Barley	cytosol	25.24	47.85
CDY60899	Canola	cytosol	22.33	45.25
CDY22349	Canola	plastid	44.01	44.44
PGSC0003DMT400070342	Potato	cytosol	28.48	44.33
OQU84313	Sorghum	mitochondrion	47.41	43.93
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	43.69	43.62
PGSC0003DMT400044378	Potato	cytosol	44.66	43.33
VIT_05s0049g00640.t01	Wine grape	cytosol	5.66	43.21
Solyc09g089940.1.1	Tomato	cytosol	44.34	43.01
PGSC0003DMT400030583	Potato	cytosol, vacuole	6.8	42.86
CDX99560	Canola	cytosol	9.39	42.65
EER88742	Sorghum	plastid	45.63	42.6
KXG29624	Sorghum	cytosol	45.47	42.45
EER93519	Sorghum	mitochondrion	47.41	42.28
Bra033679.1-P	Field mustard	plastid	44.01	42.24
CDX86854	Canola	cytosol	19.74	42.07
EER88676	Sorghum	mitochondrion, plastid	48.06	42.01
AT5G43390.1	Thale cress	cytosol, plastid	43.37	41.68
PGSC0003DMT400030584	Potato	cytosol, plastid	41.26	41.67
Solyc01g009530.1.1	Tomato	cytosol	14.4	41.59
AT5G43400.1	Thale cress	plastid	43.69	41.22
CDY09774	Canola	cytosol, plastid	43.2	41.14
Solyc01g009540.1.1	Tomato	cytosol	6.31	41.05
KRH75085	Soybean	cytosol, plastid	42.88	41.02
Bra008847.1-P	Field mustard	nucleus, plastid	43.53	40.39
CDX69659	Canola	cytosol	17.96	40.22
AT5G13210.1	Thale cress	cytosol, plastid	43.2	39.67
CDX69660	Canola	plastid	22.01	39.53
VIT_05s0049g00560.t01	Wine grape	cytosol	33.66	39.39
Bra035287.1-P	Field mustard	cytosol	36.57	38.11
VIT_05s0049g00650.t01	Wine grape	cytosol	7.77	36.36
AT3G24780.1	Thale cress	nucleus	40.61	35.1
CDX99561	Canola	nucleus, plastid	16.18	31.55
CDX86853	Canola	endoplasmic reticulum, extracellular	8.74	29.03
OQU88215	Sorghum	cytosol	16.99	26.25

Protein Annotations

EnsemblPlants:EES01714	EnsemblPlantsGene:SORBI_3003G347400	EntrezGene:8085436	InterPro:DUF2828	InterPro:UCP015417_vWA	ncoils:Coil
PANTHER:PTHR31373	PANTHER:PTHR31373:SF8	PFAM:PF11443	PIRSF:PIRSF015417	ProteinID:EES01714	ProteinID:EES01714.1
RefSeq:XP_002456594.1	SEG:seg	unigene:Sbi.5448	UniParc:UPI0001A845FE	UniProt:C5XP19	MapMan:35.2

Description

hypothetical protein

Coordinates

chr3:+:66792068..66794365

Molecular Weight (calculated)

67540.6 Da

IEP (calculated)

7.252

GRAVY (calculated)

-0.220

Length

618 amino acids

Sequence
(BLAST)

001: MAPAAALVGP PIAFVAGANL PPKPIRSSSP DHSSDEISPS PMDEDSPAPG RTMKEEVVPQ SGRPLAYASS GDPCVDFFFQ VVPGVTSDAD LAVLLDAAWS
101: HDARTALKLV CHLRGVRGLG KSDRDGFYAA ALWMHERHPL TLAANLANFA KFGCLKDLPE ILYLVLHGPR DEDQDQRKGD DRRHPVKRRR GVSEAQAAKE
201: KLNKEAQLAQ AALARYASDE AFRHLYDRVA DTFAELLKSD VEHLRVGDTT KIGLAAKWCP SLRSSYDRAT LLCEAIARRI FPRESRQDYL NISDKHYSYR
301: VRDRLRREVL VPLRKALELP EVYMSAGKLD DLPYERVASV AMQRYKEAFQ KRDKPRVAGF FDEVRTGHAR MAAGAVLPHE LIAAALKGEH DEAKELQWRS
401: MVYALATEGR LDNCIAVCGL MTGTAATDPA VSAAIALGLL ISELSQEPWK GRVITFDETH QLHKLHGANL KEKLQPVVAT LGTRKKGANL QGVFSKILGA
501: AVAGGLRSDM MVKRVFVLSD MDFDGWAGSA AAWETEYQGI SSRFTDAGFT APEVVFWNVG TSKASMPVVA AQKGAALVSG YSKNLVRLFL EADGNLTPAA
601: VMADAISGSE YDALEVFD

Best Arabidopsis Sequence Match ( AT1G48450.1 )
(BLAST)

001: MDAVAANLFQ SPSLLRQTSE RLIFSTPNCP GFMRISSGPQ FRLRQNSSLK FSRPFQSGTT CVKSRRSFVV KASASGDAST ESIAPLQLKS PVGQFLSQIL
101: VSHPHLVPAA VEQQLEQLQI DRDAEEQSKD ASSVLGTDIV LYRRIAEVKE KERRRALEEI LYALVVQKFM DANVTLVPSI TSSSADPSGR VDTWPTLDGE
201: LERLHSPEVY EMIQNHLSII LKNRTDDLTA VAQISKLGVG QVYAASVMYG YFLKRIDQRF QLEKTMRILP GGSDEGETSI EQAGRDVERN FYEEAEETYQ
301: AVSSNQDVGS FVGGINASGG FSSDMKQSRL KTYVMSFDGE TLQRYATIRS RESVGIIEKH TEALFGRPEI VITPQGTIDS SKDEHIKISF KGLKRLVLEA
401: VTFGSFLWDV ESHVDSRYHF VLN

Arabidopsis Description

Alanine-tRNA ligase, putative (DUF760) [Source:UniProtKB/TrEMBL;Acc:Q9LP80]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.