Factsheet for TraesCS5D01G309200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G302800.1	Wheat	cytosol, plastid	98.1	98.41
TraesCS5A01G302500.1	Wheat	cytosol, plastid	94.44	94.15
HORVU5Hr1G079400.3	Barley	cytosol, nucleus, plastid	83.81	84.48
TraesCS3D01G541900.1	Wheat	mitochondrion	65.56	83.43
KXG37641	Sorghum	plastid	67.14	67.14
Os09t0499400-01	Rice	vacuole	62.7	66.5
EES01714	Sorghum	plastid	63.97	65.21
PGSC0003DMT400094367	Potato	cytosol	8.1	48.11
PGSC0003DMT400070342	Potato	cytosol	29.21	46.35
TraesCS7D01G496700.1	Wheat	cytosol	32.06	45.91
TraesCS6D01G138100.1	Wheat	cytosol, nucleus, peroxisome, plastid	46.35	45.84
CDY60899	Canola	cytosol	21.9	45.25
CDY22349	Canola	plastid	43.81	45.1
CDX99560	Canola	cytosol	9.68	44.85
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	43.81	44.59
Solyc01g009540.1.1	Tomato	cytosol	6.67	44.21
PGSC0003DMT400030583	Potato	cytosol, vacuole	6.83	43.88
PGSC0003DMT400044378	Potato	cytosol	44.29	43.8
Solyc09g089940.1.1	Tomato	cytosol	44.29	43.8
Bra033679.1-P	Field mustard	plastid	43.97	43.01
TraesCS7D01G490900.1	Wheat	mitochondrion	43.97	42.81
CDX86854	Canola	cytosol	19.68	42.76
TraesCS7D01G490500.1	Wheat	cytosol	33.17	42.39
KRH75085	Soybean	cytosol, plastid	43.33	42.26
PGSC0003DMT400030584	Potato	cytosol, plastid	40.95	42.16
VIT_05s0049g00640.t01	Wine grape	cytosol	5.4	41.98
CDY09774	Canola	cytosol, plastid	42.86	41.6
TraesCS5D01G309300.1	Wheat	plastid	45.71	41.2
TraesCS7D01G394600.1	Wheat	cytosol	45.56	41.18
AT5G43390.1	Thale cress	cytosol, plastid	41.9	41.06
CDX69659	Canola	cytosol	17.94	40.94
TraesCS5D01G325700.1	Wheat	cytosol, nucleus, plastid	44.92	40.9
Bra008847.1-P	Field mustard	nucleus, plastid	43.02	40.69
AT5G43400.1	Thale cress	plastid	42.06	40.46
TraesCS1D01G356100.1	Wheat	cytosol, nucleus, peroxisome	44.92	40.2
Solyc01g009530.1.1	Tomato	cytosol	13.65	40.19
TraesCS6D01G071700.1	Wheat	cytosol	45.08	40.0
CDX69660	Canola	plastid	21.75	39.83
VIT_05s0049g00560.t01	Wine grape	cytosol	33.17	39.58
AT5G13210.1	Thale cress	cytosol, plastid	42.06	39.38
TraesCS7D01G490400.1	Wheat	mitochondrion	42.38	38.31
Bra035287.1-P	Field mustard	cytosol	35.71	37.94
VIT_05s0049g00650.t01	Wine grape	cytosol	7.94	37.88
AT3G24780.1	Thale cress	nucleus	40.16	35.38
TraesCS6D01G138500.1	Wheat	mitochondrion, plastid	16.98	31.75
CDX99561	Canola	nucleus, plastid	14.6	29.02
CDX86853	Canola	endoplasmic reticulum, extracellular	8.1	27.42

Protein Annotations

EnsemblPlants:TraesCS5D01G309200.1	EnsemblPlantsGene:TraesCS5D01G309200	InterPro:DUF2828	InterPro:UCP015417_vWA	PANTHER:PTHR31373	PANTHER:PTHR31373:SF9
PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr5D:-:406393341..406395233

Molecular Weight (calculated)

68811.2 Da

IEP (calculated)

8.964

GRAVY (calculated)

-0.245

Length

630 amino acids

Sequence
(BLAST)

001: MAPPAAALLG PPIAIVDTDM PDRKPKAKPT PKKPKRAQLR GDSSSSDDDS DSEGDYSDAE PPRSCVSRPP KAEGKALAYA SSGDPCVDFF FQVVPAATAA
101: ADVAALLSVA WAGDARTALR LVCHLRGVRG LGKSDREGFY AAALWMHANH PRTLAANLAS FARFGCLKDL PEIVYRVLHG PRDERKDGDD STRVHRRGGS
201: RNNKRRCLGA AAEAAKARRQ KETEHAQVVL ARYDSDESFR FLYDRVAELF AELLKSDLEH LRSGDTAKIG LAAKWCPSLR SSYDRSTLLC EAIARRVFPR
301: DSSPEYLSIP DKHYAYRVRN RLRREVDVPL RKVLELPEVY MSARKWDELP YARVASRAMR QYKQAFDKHD KSGVAGFYDE VRAGLTRIPA DAVLPHEILA
401: AALKGEHDES AELQWRHMVA SLASEGRLSN CIAMCALSSS VEKPPAAAAI ALGLLISELS KDPWKGRVIT FDATHQLHKV RGASLVEKLR TLAAVRAQKG
501: ANLQAVFNKI LNVAVAGGLS KDMMVKRVFV LSDMEFDGWV GGEAWVSEHE AIKKKFAAEG FAVPEVVFWN VGTSKASVPV VAAQAGVALV SGYSKNLVRL
601: FLEADGVLTP SAIMADAISG PEYDALEVLD

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.