Factsheet for TraesCS5D01G309300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G302600.1	Wheat	plastid	95.99	95.72
TraesCS5B01G302900.1	Wheat	plastid	94.99	94.45
HORVU5Hr1G079390.2	Barley	cytosol, nucleus, plastid	64.38	82.87
Os09t0499500-01	Rice	cytosol	15.59	81.95
TraesCS1D01G356100.1	Wheat	cytosol, nucleus, peroxisome	82.12	81.53
TraesCS6D01G071700.1	Wheat	cytosol	81.83	80.56
TraesCS7D01G394600.1	Wheat	cytosol	78.54	78.77
TraesCS7D01G496700.1	Wheat	cytosol	48.93	77.73
TraesCS5D01G325700.1	Wheat	cytosol, nucleus, plastid	75.25	76.01
OQU84313	Sorghum	mitochondrion	67.67	70.91
EER88676	Sorghum	mitochondrion, plastid	69.67	68.88
EER93519	Sorghum	mitochondrion	66.95	67.53
PGSC0003DMT400094367	Potato	cytosol	8.87	58.49
CDX86854	Canola	cytosol	24.03	57.93
CDX69659	Canola	cytosol	22.17	56.16
VIT_05s0049g00640.t01	Wine grape	cytosol	6.44	55.56
CDY60899	Canola	cytosol	23.89	54.75
CDX99560	Canola	cytosol	10.59	54.41
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	47.21	53.31
TraesCS6D01G138100.1	Wheat	cytosol, nucleus, peroxisome, plastid	47.64	52.28
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.3	52.04
TraesCS7D01G490500.1	Wheat	cytosol	36.62	51.93
Solyc09g089940.1.1	Tomato	cytosol	47.21	51.81
Solyc01g009530.1.1	Tomato	cytosol	15.74	51.4
PGSC0003DMT400044378	Potato	cytosol	46.49	51.02
CDY09774	Canola	cytosol, plastid	46.92	50.54
PGSC0003DMT400070342	Potato	cytosol	28.47	50.13
PGSC0003DMT400030584	Potato	cytosol, plastid	43.78	50.0
TraesCS7D01G490900.1	Wheat	mitochondrion	46.21	49.92
Solyc01g009540.1.1	Tomato	cytosol	6.72	49.47
Zm00001d045614_P001	Maize	mitochondrion	6.44	49.45
Bra035287.1-P	Field mustard	cytosol	41.92	49.41
Bra008847.1-P	Field mustard	nucleus, plastid	47.07	49.4
CDY22349	Canola	plastid	43.2	49.35
KRH75085	Soybean	cytosol, plastid	45.35	49.07
Bra033679.1-P	Field mustard	plastid	44.64	48.45
AT5G13210.1	Thale cress	cytosol, plastid	46.64	48.44
VIT_05s0049g00560.t01	Wine grape	cytosol	36.05	47.73
AT5G43390.1	Thale cress	cytosol, plastid	43.49	47.28
TraesCS3D01G541900.1	Wheat	mitochondrion	33.48	47.27
AT5G43400.1	Thale cress	plastid	44.06	47.02
TraesCS7D01G490400.1	Wheat	mitochondrion	45.78	45.91
TraesCS5D01G309200.1	Wheat	plastid	41.2	45.71
CDX69660	Canola	plastid	21.6	43.9
VIT_05s0049g00650.t01	Wine grape	cytosol	8.15	43.18
AT3G24780.1	Thale cress	nucleus	43.92	42.94
TraesCS6D01G138500.1	Wheat	mitochondrion, plastid	20.6	42.73
CDX99561	Canola	nucleus, plastid	15.88	35.02
CDX86853	Canola	endoplasmic reticulum, extracellular	7.3	27.42

Protein Annotations

EnsemblPlants:TraesCS5D01G309300.1	EnsemblPlantsGene:TraesCS5D01G309300	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
PANTHER:PTHR31373	PANTHER:PTHR31373:SF2	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	SUPFAM:SSF53300
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:406415460..406417559

Molecular Weight (calculated)

77969.6 Da

IEP (calculated)

9.243

GRAVY (calculated)

-0.324

Length

699 amino acids

Sequence
(BLAST)

001: MATQTEPAAP PRRLLGPPVI RAARPSPGSD AAAPASHPFL DLLDAAFNAP SAAEAKAALA PRRALTENCS ATYANSGNPC LDLFFQVVPD TPPERVRALL
101: AAAWAHDALT ALKLACNLRG VRGTGKSDKE GFYAAALWLH DNHPRTLACN VAALAEFGYL KDFPELLFRL IHGPDVRKAA REGAAAEKVR RKEKDFAKQR
201: EALRASLASR KRARELAPVP PKATFGDFLS AALSKSGRKP MEVETVPVSV AVQDPAEQKP EEMEVDQKKK KPRRMSKKVR KVAKLAVQSL ETYYGDSAYR
301: FLFEAVADFF AALLASDLEQ LAAGGKKRKI GLAAKWCPTP GSSFDRTTLL CEAIAHRLFP RDSDPEYAQL TDEHYTYRAL HRLRREVLVP LRKVLELPEV
401: YMSAQRWSEL PYTRVASVAM RRYKFLFKKH DEERFGKYLE DVEAGKAKIS AGALLPHEIA ASAYRGQEDD VSELQWRRMV DDLRSKGSLR NCISVCDVSG
501: SMHGTPMEVC IALGVLTSEL SEEPWAGKVI TFSERPQIHL IKGKTLREKM SFVESMQWDM NTNFQAVFDQ ILRTAVEARL APEKMIRTIF VYSDMEFDQA
601: SATRGYYARS RSWDTDYEVI CKKFRAAGYG DVVPQIIFWN LRDSKSTPVT STQPGVAMVS GFSKNFLKIF LKNDGVVNPE AIMMEAIAGE EYQKLEVFD

Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)

001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD

Arabidopsis Description

AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.