Factsheet for TraesCS6D01G138100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G176900.1	Wheat	cytosol, nucleus, peroxisome, plastid	94.03	92.44
TraesCS6A01G148700.1	Wheat	cytosol	92.78	92.06
HORVU6Hr1G029540.1	Barley	cytosol, nucleus, peroxisome	90.42	88.21
Os02t0179600-01	Rice	extracellular	78.18	75.91
KXG29624	Sorghum	cytosol	77.08	74.17
Zm00001d053740_P001	Maize	cytosol	75.98	73.89
TraesCS7D01G490500.1	Wheat	cytosol	54.32	70.18
TraesCS7D01G490900.1	Wheat	mitochondrion	64.99	63.99
PGSC0003DMT400094367	Potato	cytosol	10.52	63.21
CDX86854	Canola	cytosol	27.32	60.0
TraesCS6D01G138500.1	Wheat	mitochondrion, plastid	31.71	59.94
CDX69659	Canola	cytosol	25.75	59.42
TraesCS7D01G490400.1	Wheat	mitochondrion	64.68	59.11
CDX99560	Canola	cytosol	12.4	58.09
CDY60899	Canola	cytosol	27.79	58.03
Solyc01g009540.1.1	Tomato	cytosol	8.48	56.84
GSMUA_AchrUn_...	Banana	cytosol, plastid	52.28	55.78
VIT_05s0049g00640.t01	Wine grape	cytosol	7.06	55.56
Solyc09g089940.1.1	Tomato	cytosol	54.47	54.47
PGSC0003DMT400044378	Potato	cytosol	53.85	53.85
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	51.81	53.31
TraesCS7D01G496700.1	Wheat	cytosol	36.26	52.5
KRH75085	Soybean	cytosol, plastid	53.06	52.32
PGSC0003DMT400030583	Potato	cytosol, vacuole	8.01	52.04
CDY22349	Canola	plastid	49.61	51.63
PGSC0003DMT400070342	Potato	cytosol	32.03	51.39
CDY09774	Canola	cytosol, plastid	51.65	50.69
PGSC0003DMT400030584	Potato	cytosol, plastid	48.67	50.65
Bra008847.1-P	Field mustard	nucleus, plastid	51.81	49.55
Bra033679.1-P	Field mustard	plastid	50.08	49.53
Bra035287.1-P	Field mustard	cytosol	45.84	49.24
AT5G13210.1	Thale cress	cytosol, plastid	51.81	49.03
TraesCS5D01G325700.1	Wheat	cytosol, nucleus, plastid	52.9	48.7
VIT_05s0049g00650.t01	Wine grape	cytosol	10.05	48.48
AT5G43390.1	Thale cress	cytosol, plastid	48.82	48.37
TraesCS1D01G356100.1	Wheat	cytosol, nucleus, peroxisome	53.38	48.3
AT5G43400.1	Thale cress	plastid	49.45	48.09
VIT_05s0049g00560.t01	Wine grape	cytosol	39.72	47.92
TraesCS7D01G394600.1	Wheat	cytosol	52.28	47.78
TraesCS5D01G309300.1	Wheat	plastid	52.28	47.64
TraesCS3D01G541900.1	Wheat	mitochondrion	36.42	46.87
Solyc01g009530.1.1	Tomato	cytosol	15.7	46.73
TraesCS6D01G071700.1	Wheat	cytosol	51.81	46.48
TraesCS5D01G309200.1	Wheat	plastid	45.84	46.35
AT3G24780.1	Thale cress	nucleus	48.51	43.22
CDX69660	Canola	plastid	22.92	42.44
CDX99561	Canola	nucleus, plastid	16.01	32.18
CDX86853	Canola	endoplasmic reticulum, extracellular	9.26	31.72

Protein Annotations

EnsemblPlants:TraesCS6D01G138100.1	EnsemblPlantsGene:TraesCS6D01G138100	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
PANTHER:PTHR31373	PANTHER:PTHR31373:SF3	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	SUPFAM:SSF53300
TIGR:cd00198	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:106703288..106705201

Molecular Weight (calculated)

68869.1 Da

IEP (calculated)

8.342

GRAVY (calculated)

-0.137

Length

637 amino acids

Sequence
(BLAST)

001: MAGFALVGPP EAATALGAAA AAPTGDTFVD LLDASFNKAT VGAGKALTEN SSPTFVSSGD PCLDFFFHVV PGTPAASVAS LLAAAWAADP VSALRLVANL
101: RGVRGSGKSD REGFYAAALW LHARHPATLA RNAASVAAFG YLKDLPELLH RIVHGGKSTR TPGKKARREA EDGGFVRRGG RGRGRGRKPR SEDRAPPVGA
201: SEERVAASLE RDRGLAAAAA LSRRAKRAEA AARALEMYSR DSTYRSLHDR TADLFAELLA EDMRKLSVGN VKDFSLAAKW CPSLDSSYDR STLLCEAIAR
301: RLFPRGSSSE LGDDLPDAHY AYRARERLRR AAIVPLRAAL KLPEVFISAR AWESVVYTRV ASVAMKNYKD LFLKHDAERF NAYLADVKSG KKRIAAGALL
401: PHQIIESLGE DGDDGGVADL QWQRMVDDMR ALGKLNSCVA VCDVSGSMSG LPMDVCIALG LLVSELTDDP WRGRVITFSE QPNIHMIKGD TLSEKTEFVR
501: NMDWGMNTDF QAVFDKILEV AVGAGLPAEK MVRRVFVFSD MEFDQASANP WETDYEAIVR KFSEAGYGAA VPEIVFWNLR DSRAVPVMSG QKGVALVSGF
601: SKNLLKLFLD GGGTFTPRVV MEKAIAGPEY DQLAVFD

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.