Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86854 | Canola | cytosol | 58.36 | 61.38 |
| CDX99560 | Canola | cytosol | 27.21 | 61.03 |
| VIT_05s0049g00640.t01 | Wine grape | cytosol | 16.07 | 60.49 |
| CDX69659 | Canola | cytosol | 53.44 | 59.06 |
| Os09t0499500-01 | Rice | cytosol | 24.59 | 56.39 |
| CDY22349 | Canola | plastid | 90.16 | 44.93 |
| TraesCS6D01G138500.1 | Wheat | mitochondrion, plastid | 42.62 | 38.58 |
| AT5G43390.1 | Thale cress | cytosol, plastid | 81.31 | 38.57 |
| AT5G43400.1 | Thale cress | plastid | 82.62 | 38.47 |
| TraesCS5A01G319700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 51.8 | 37.98 |
| VIT_05s0049g00560.t01 | Wine grape | cytosol | 60.98 | 35.23 |
| TraesCS7D01G490500.1 | Wheat | cytosol | 56.72 | 35.09 |
| TraesCS7D01G496700.1 | Wheat | cytosol | 49.51 | 34.32 |
| PGSC0003DMT400044378 | Potato | cytosol | 69.18 | 33.12 |
| TraesCS7B01G410900.1 | Wheat | cytosol, nucleus, plastid | 50.49 | 32.98 |
| Solyc09g089940.1.1 | Tomato | cytosol | 68.85 | 32.97 |
| CDY09774 | Canola | cytosol, plastid | 61.31 | 28.81 |
| TraesCS6B01G177100.1 | Wheat | cytosol | 58.36 | 28.12 |
| Os02t0179600-01 | Rice | extracellular | 60.33 | 28.05 |
| TraesCS7B01G410500.1 | Wheat | mitochondrion, plastid | 57.7 | 28.03 |
| TraesCS6D01G138100.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 58.03 | 27.79 |
| GSMUA_AchrUn_... | Banana | cytosol, plastid | 54.1 | 27.64 |
| Zm00001d053740_P001 | Maize | cytosol | 59.34 | 27.63 |
| Os06t0652100-00 | Rice | mitochondrion | 57.7 | 27.46 |
| TraesCS6A01G148700.1 | Wheat | cytosol | 57.7 | 27.41 |
| KXG29624 | Sorghum | cytosol | 59.34 | 27.34 |
| HORVU7Hr1G112970.1 | Barley | cytosol, nucleus | 57.7 | 27.33 |
| TraesCS7D01G490900.1 | Wheat | mitochondrion | 57.7 | 27.2 |
| TraesCS6B01G176900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 57.7 | 27.16 |
| HORVU6Hr1G029540.1 | Barley | cytosol, nucleus, peroxisome | 58.03 | 27.11 |
| TraesCS3D01G541900.1 | Wheat | mitochondrion | 43.93 | 27.07 |
| TraesCS6A01G149200.1 | Wheat | cytosol | 57.38 | 26.96 |
| TraesCS6A01G073400.1 | Wheat | cytosol, peroxisome, plastid | 49.84 | 26.86 |
| EER88742 | Sorghum | plastid | 56.07 | 25.83 |
| OQU84313 | Sorghum | mitochondrion | 56.07 | 25.64 |
| EER93519 | Sorghum | mitochondrion | 55.74 | 24.53 |
| TraesCS7B01G410400.1 | Wheat | mitochondrion | 55.74 | 24.25 |
| EER88676 | Sorghum | mitochondrion, plastid | 56.07 | 24.19 |
| TraesCS1A01G354300.1 | Wheat | cytosol | 55.41 | 24.07 |
| TraesCS7A01G503000.1 | Wheat | mitochondrion | 54.1 | 24.05 |
| TraesCS1D01G356100.1 | Wheat | cytosol, nucleus, peroxisome | 55.41 | 24.01 |
| TraesCS7B01G301000.1 | Wheat | cytosol | 55.08 | 24.0 |
| TraesCS5A01G302600.1 | Wheat | plastid | 55.08 | 23.97 |
| TraesCS7D01G490400.1 | Wheat | mitochondrion | 54.75 | 23.96 |
| TraesCS1B01G367400.1 | Wheat | cytosol | 55.08 | 23.93 |
| TraesCS5B01G302900.1 | Wheat | plastid | 55.08 | 23.9 |
| TraesCS5D01G309300.1 | Wheat | plastid | 54.75 | 23.89 |
| TraesCS7D01G394600.1 | Wheat | cytosol | 54.1 | 23.67 |
| TraesCS5B01G319900.1 | Wheat | cytosol, nucleus, peroxisome | 53.44 | 23.49 |
| TraesCS7B01G417500.1 | Wheat | cytosol, plastid | 51.15 | 23.15 |
| TraesCS5D01G325700.1 | Wheat | cytosol, nucleus, plastid | 52.13 | 22.98 |
| HORVU6Hr1G013080.3 | Barley | nucleus, peroxisome | 52.79 | 22.87 |
| HORVU7Hr1G112960.3 | Barley | nucleus | 45.9 | 22.62 |
| TraesCS6B01G098400.1 | Wheat | cytosol | 52.46 | 22.54 |
| TraesCS6D01G071700.1 | Wheat | cytosol | 52.46 | 22.54 |
| EES01714 | Sorghum | plastid | 45.25 | 22.33 |
| Os09t0499400-01 | Rice | vacuole | 43.28 | 22.22 |
| TraesCS5B01G302800.1 | Wheat | cytosol, plastid | 45.25 | 21.97 |
| TraesCS5D01G309200.1 | Wheat | plastid | 45.25 | 21.9 |
| TraesCS5B01G320000.1 | Wheat | cytosol | 53.11 | 21.86 |
| TraesCS5A01G302500.1 | Wheat | cytosol, plastid | 44.92 | 21.68 |
| KXG37641 | Sorghum | plastid | 44.26 | 21.43 |
| TraesCS3B01G607400.1 | Wheat | cytosol | 44.92 | 21.21 |
| HORVU5Hr1G081560.3 | Barley | nucleus | 48.52 | 21.05 |
| OQU88215 | Sorghum | cytosol | 25.9 | 19.75 |
| HORVU5Hr1G079400.3 | Barley | cytosol, nucleus, plastid | 37.7 | 18.4 |
| HORVU5Hr1G079390.2 | Barley | cytosol, nucleus, plastid | 24.92 | 14.0 |
| CDX99561 | Canola | nucleus, plastid | 9.84 | 9.46 |
| Zm00001d045614_P001 | Maize | mitochondrion | 2.3 | 7.69 |
| HORVU3Hr1G117270.1 | Barley | cytosol | 2.95 | 2.76 |
| Os12t0141800-01 | Rice | cytosol, mitochondrion, peroxisome, plastid | 1.31 | 2.19 |
| CDX86853 | Canola | endoplasmic reticulum, extracellular | 0.66 | 1.08 |
| CDX69660 | Canola | plastid | 0.98 | 0.87 |
Protein Annotations
| EnsemblPlants:CDY60899 | EnsemblPlantsGene:GSBRNA2T00030242001 | InterPro:DUF2828 | InterPro:IPR036465 | InterPro:UCP015417_vWA | InterPro:vWFA_dom_sf |
| PANTHER:PTHR31373 | PANTHER:PTHR31373:SF0 | PFAM:PF11443 | PIRSF:PIRSF015417 | ProteinID:CDY60899 | ProteinID:CDY60899.1 |
| SUPFAM:SSF53300 | UniParc:UPI0004EE017A | UniProt:A0A078J7B6 | MapMan:35.2 | : | : |
Description
BnaCnng37030DBnaCnng37030D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078J7B6]
Coordinates
chrLK033929:+:333..1337
Molecular Weight (calculated)
34651.7 Da
IEP (calculated)
5.530
GRAVY (calculated)
-0.331
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: RLNINLALPE VYMSAKEWNH LKYNRVASVA MTNYKTLFEK HDSERFREFL EDVKSGKKKM AAGALLPHKI ISQLSDDGEV GAEVAELQWA RMVEDVAKKG
101: KMKNSLAVCD VSGSMAGVPM EVCVALGLLV SELNEEPWKG KVITFSENPQ LHLVTGSSLR EKTKFITEMD WGMNTDFQKV FDRILEVAVE NNLSNDQMIK
201: RLFVFSDMEF DSAERSKKKW ETDYEVVQRK YKENGFENVP EIVFWNLRDS SATPVAAKQK GVALVSGFSK NLLNLFLEEG GIVNPEDVMW LAIKGEEYKK
301: LVVHD
101: KMKNSLAVCD VSGSMAGVPM EVCVALGLLV SELNEEPWKG KVITFSENPQ LHLVTGSSLR EKTKFITEMD WGMNTDFQKV FDRILEVAVE NNLSNDQMIK
201: RLFVFSDMEF DSAERSKKKW ETDYEVVQRK YKENGFENVP EIVFWNLRDS SATPVAAKQK GVALVSGFSK NLLNLFLEEG GIVNPEDVMW LAIKGEEYKK
301: LVVHD
001: MASSTTILLG PPSVAGNSPI IKPIHSPETH ISDENTLISQ TATLNLEEPP PMGLTENFSP TFLSSGNPCL DFFFHIVPDT SPDDLIQRLA ISWSHDPLTT
101: LKLICNLRGV RGTGKSDKEG FYTAAFWLYK NHPKTLALNV PALVDFGYFK DLPEILFRIL EGQNMERGKN RVWRKRVQRK FKGKREKKSE ISGEMEDRIL
201: ENAEEIGGSV DKVKARALRK QREFEKAKKA VTRYNSDANY RLLFDRIADL FAVLLKSDLK YLNSNGLTKI SLASKWCPSV DSSYDKATLI CEAIARRMFP
301: REEYEGIEEA HYAYRIRDRL RKEVLVPLHK ALEFPELFMS AKEWNLLKYN RVPSVAMKNY KKLFEEHDSE RFTEFLEDVK SGKKKIAAGA LLPHQIINQL
401: EDDSGSEVGA EVAELQWARM VDDLAKKGKL KNSLAVCDVS GSMSGTPMEV CVALGLLVSE LSEEPWKGKV ITFSENPELH IVTGSSLREK TQFVREMEWG
501: MNTDFQIVFD RILEVAVENN LTDDQMIKRL FVFSDMEFDD AMANSHSEVS YHLSVEDRLK ISKERSKEKW ETDYEVVQRK YKEKGFQNVP EMVFWNLRDS
601: SATPVVANQK GVAMVSGFSK NLLTLFLEEG GIVNPEDVMW IAIKGEEYKK LVVFD
101: LKLICNLRGV RGTGKSDKEG FYTAAFWLYK NHPKTLALNV PALVDFGYFK DLPEILFRIL EGQNMERGKN RVWRKRVQRK FKGKREKKSE ISGEMEDRIL
201: ENAEEIGGSV DKVKARALRK QREFEKAKKA VTRYNSDANY RLLFDRIADL FAVLLKSDLK YLNSNGLTKI SLASKWCPSV DSSYDKATLI CEAIARRMFP
301: REEYEGIEEA HYAYRIRDRL RKEVLVPLHK ALEFPELFMS AKEWNLLKYN RVPSVAMKNY KKLFEEHDSE RFTEFLEDVK SGKKKIAAGA LLPHQIINQL
401: EDDSGSEVGA EVAELQWARM VDDLAKKGKL KNSLAVCDVS GSMSGTPMEV CVALGLLVSE LSEEPWKGKV ITFSENPELH IVTGSSLREK TQFVREMEWG
501: MNTDFQIVFD RILEVAVENN LTDDQMIKRL FVFSDMEFDD AMANSHSEVS YHLSVEDRLK ISKERSKEKW ETDYEVVQRK YKEKGFQNVP EMVFWNLRDS
601: SATPVVANQK GVAMVSGFSK NLLTLFLEEG GIVNPEDVMW IAIKGEEYKK LVVFD
Arabidopsis Description
AT5g43400/MWF20_9 [Source:UniProtKB/TrEMBL;Acc:Q94AE4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.