Factsheet for Os12t0141800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
peroxisome 2
plastid 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69660	Canola	plastid	27.32	14.53
CDX99561	Canola	nucleus, plastid	20.77	11.99
Os09t0499400-01	Rice	vacuole	30.6	9.43
Bra035287.1-P	Field mustard	cytosol	28.96	8.94
PGSC0003DMT400030584	Potato	cytosol, plastid	29.51	8.82
CDY22349	Canola	plastid	28.96	8.66
Os06t0652100-00	Rice	mitochondrion	30.05	8.58
AT5G13210.1	Thale cress	cytosol, plastid	31.15	8.47
VIT_05s0049g00560.t01	Wine grape	cytosol	24.04	8.33
CDY09774	Canola	cytosol, plastid	29.51	8.32
PGSC0003DMT400044378	Potato	cytosol	28.96	8.32
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	27.87	8.24
Bra033679.1-P	Field mustard	plastid	28.96	8.23
Solyc09g089940.1.1	Tomato	cytosol	28.42	8.16
Bra008847.1-P	Field mustard	nucleus, plastid	29.51	8.11
CDX86853	Canola	endoplasmic reticulum, extracellular	8.2	8.06
AT5G43390.1	Thale cress	cytosol, plastid	27.87	7.93
KRH75085	Soybean	cytosol, plastid	27.87	7.89
Os02t0179600-01	Rice	extracellular	27.32	7.62
AT5G43400.1	Thale cress	plastid	26.78	7.48
AT3G24780.1	Thale cress	nucleus	28.42	7.27
Solyc01g009530.1.1	Tomato	cytosol	8.2	7.01
PGSC0003DMT400030583	Potato	cytosol, vacuole	1.64	3.06
CDX99560	Canola	cytosol	1.64	2.21
OQU88215	Sorghum	cytosol	3.28	1.5
CDX69659	Canola	cytosol	2.19	1.45
CDX86854	Canola	cytosol	2.19	1.38
CDY60899	Canola	cytosol	2.19	1.31
VIT_05s0049g00650.t01	Wine grape	cytosol	0.55	0.76
PGSC0003DMT400070342	Potato	cytosol	1.64	0.76
Os09t0499500-01	Rice	cytosol	0.55	0.75
PGSC0003DMT400094367	Potato	cytosol	0.0	0.0
Solyc01g009540.1.1	Tomato	cytosol	0.0	0.0
VIT_05s0049g00640.t01	Wine grape	cytosol	0.0	0.0
Zm00001d045614_P001	Maize	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:Os12t0141800-01	EnsemblPlantsGene:Os12g0141800	EntrezGene:4351474	InterPro:DUF2828	InterPro:UCP015417_vWA	PANTHER:PTHR31373
PANTHER:PTHR31373:SF2	PFAM:PF11443	ProteinID:BAT15854.1	RefSeq:XP_015619679.1	SEG:seg	UniParc:UPI000393BA4C
UniProt:A0A0P0Y6S2	MapMan:35.2	:	:	:	:

Description

Domain of unknown function DUF2828 domain containing protein. (Os12t0141800-01)

Coordinates

chr12:+:2028539..2030789

Molecular Weight (calculated)

19403.0 Da

IEP (calculated)

8.493

GRAVY (calculated)

-0.225

Length

183 amino acids

Sequence
(BLAST)

001: MESGESKPKP PKPSSTSPLR AMSSAAGDHL ILGPPVAGLP VGNASSSAEA GSTSTAGHVA GAEVVEHLQS GAFGNPCLSF FALVDRDTPP QHLRDLLAAA
101: WEHDALTALK LVFNLRGVRD NGKGDREGFY TAALWMHQYH PRTLAGNLSA FAEFGYIKDF PELLYRIIHG ADARKVAKAK SKA

Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)

001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD

Arabidopsis Description

AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.