Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 2
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0049g00640.t01 | Wine grape | cytosol | 12.59 | 61.73 |
| PGSC0003DMT400094367 | Potato | cytosol | 14.36 | 53.77 |
| Zm00001d045614_P001 | Maize | mitochondrion | 10.58 | 46.15 |
| TraesCS5A01G319700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 48.36 | 46.15 |
| TraesCS7D01G496700.1 | Wheat | cytosol | 47.86 | 43.18 |
| TraesCS7D01G490500.1 | Wheat | cytosol | 49.37 | 39.76 |
| PGSC0003DMT400030583 | Potato | cytosol, vacuole | 9.57 | 38.78 |
| PGSC0003DMT400044378 | Potato | cytosol | 60.71 | 37.83 |
| TraesCS7B01G410900.1 | Wheat | cytosol, nucleus, plastid | 43.58 | 37.05 |
| PGSC0003DMT400030584 | Potato | cytosol, plastid | 56.68 | 36.76 |
| Os09t0499500-01 | Rice | cytosol | 12.09 | 36.09 |
| TraesCS3D01G541900.1 | Wheat | mitochondrion | 44.33 | 35.56 |
| TraesCS6D01G138500.1 | Wheat | mitochondrion, plastid | 28.97 | 34.12 |
| TraesCS6A01G073400.1 | Wheat | cytosol, peroxisome, plastid | 48.61 | 34.1 |
| Zm00001d053740_P001 | Maize | cytosol | 53.15 | 32.21 |
| GSMUA_AchrUn_... | Banana | cytosol, plastid | 48.36 | 32.16 |
| TraesCS6D01G138100.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 51.39 | 32.03 |
| TraesCS6B01G177100.1 | Wheat | cytosol | 50.88 | 31.91 |
| TraesCS7B01G410500.1 | Wheat | mitochondrion, plastid | 50.38 | 31.85 |
| TraesCS6A01G148700.1 | Wheat | cytosol | 51.39 | 31.78 |
| KXG29624 | Sorghum | cytosol | 52.9 | 31.72 |
| Os02t0179600-01 | Rice | extracellular | 52.39 | 31.71 |
| HORVU6Hr1G029540.1 | Barley | cytosol, nucleus, peroxisome | 51.89 | 31.55 |
| TraesCS6B01G176900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 51.39 | 31.48 |
| TraesCS6A01G149200.1 | Wheat | cytosol | 51.39 | 31.43 |
| VIT_05s0049g00560.t01 | Wine grape | cytosol | 41.56 | 31.25 |
| Os06t0652100-00 | Rice | mitochondrion | 50.13 | 31.05 |
| OQU84313 | Sorghum | mitochondrion | 51.89 | 30.88 |
| EER88742 | Sorghum | plastid | 51.39 | 30.82 |
| Os09t0499400-01 | Rice | vacuole | 46.1 | 30.81 |
| HORVU7Hr1G112970.1 | Barley | cytosol, nucleus | 49.62 | 30.59 |
| TraesCS7D01G490900.1 | Wheat | mitochondrion | 49.12 | 30.14 |
| EER93519 | Sorghum | mitochondrion | 51.89 | 29.73 |
| EER88676 | Sorghum | mitochondrion, plastid | 52.39 | 29.42 |
| TraesCS5B01G302800.1 | Wheat | cytosol, plastid | 46.35 | 29.3 |
| TraesCS7B01G417500.1 | Wheat | cytosol, plastid | 49.62 | 29.23 |
| TraesCS5D01G309200.1 | Wheat | plastid | 46.35 | 29.21 |
| TraesCS5A01G302500.1 | Wheat | cytosol, plastid | 46.35 | 29.11 |
| TraesCS7D01G394600.1 | Wheat | cytosol | 50.88 | 28.98 |
| TraesCS5A01G302600.1 | Wheat | plastid | 51.13 | 28.96 |
| TraesCS1A01G354300.1 | Wheat | cytosol | 51.13 | 28.92 |
| TraesCS1D01G356100.1 | Wheat | cytosol, nucleus, peroxisome | 51.13 | 28.84 |
| TraesCS5B01G302900.1 | Wheat | plastid | 50.88 | 28.73 |
| TraesCS7B01G301000.1 | Wheat | cytosol | 50.63 | 28.71 |
| HORVU6Hr1G013080.3 | Barley | nucleus, peroxisome | 50.63 | 28.55 |
| TraesCS1B01G367400.1 | Wheat | cytosol | 50.38 | 28.49 |
| TraesCS3B01G607400.1 | Wheat | cytosol | 46.35 | 28.48 |
| EES01714 | Sorghum | plastid | 44.33 | 28.48 |
| TraesCS5D01G309300.1 | Wheat | plastid | 50.13 | 28.47 |
| TraesCS6B01G098400.1 | Wheat | cytosol | 50.88 | 28.45 |
| KXG37641 | Sorghum | plastid | 45.09 | 28.41 |
| TraesCS5B01G319900.1 | Wheat | cytosol, nucleus, peroxisome | 49.62 | 28.39 |
| TraesCS5D01G325700.1 | Wheat | cytosol, nucleus, plastid | 49.37 | 28.32 |
| TraesCS6D01G071700.1 | Wheat | cytosol | 50.63 | 28.31 |
| TraesCS7A01G503000.1 | Wheat | mitochondrion | 48.36 | 27.99 |
| TraesCS7D01G490400.1 | Wheat | mitochondrion | 48.36 | 27.55 |
| TraesCS7B01G410400.1 | Wheat | mitochondrion | 48.11 | 27.25 |
| TraesCS5B01G320000.1 | Wheat | cytosol | 50.13 | 26.86 |
| HORVU7Hr1G112960.3 | Barley | nucleus | 41.56 | 26.66 |
| HORVU5Hr1G081560.3 | Barley | nucleus | 46.1 | 26.03 |
| HORVU5Hr1G079400.3 | Barley | cytosol, nucleus, plastid | 40.3 | 25.6 |
| OQU88215 | Sorghum | cytosol | 24.69 | 24.5 |
| HORVU5Hr1G079390.2 | Barley | cytosol, nucleus, plastid | 33.5 | 24.49 |
| HORVU3Hr1G117270.1 | Barley | cytosol | 10.83 | 13.19 |
| Os12t0141800-01 | Rice | cytosol, mitochondrion, peroxisome, plastid | 0.76 | 1.64 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400070342 | EnsemblPlantsGene:PGSC0003DMG400027351 | InterPro:DUF2828 | InterPro:UCP015417_vWA | PANTHER:PTHR31373 | PANTHER:PTHR31373:SF0 |
| PFAM:PF11443 | PGSC:PGSC0003DMG400027351 | PIRSF:PIRSF015417 | UniParc:UPI000294FEFB | UniProt:M1CM08 | MapMan:35.2 |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400027351]
Coordinates
chr11:+:4525090..4526402
Molecular Weight (calculated)
45645.3 Da
IEP (calculated)
8.419
GRAVY (calculated)
-0.370
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKREGFLE GLKEKKCSSI PNGKAKRLRE KILAKANKFL ERYTEDYDFQ FLYDKVSGFF ANALWKDMEL YNEGKFYELS LAAKWCPSLD SSYDKSLLMC
101: ESVGRKLFPY DEYMDLEDAH YAYRVRIRLR KEVLVPLHKV LEIPEVYICA NKWEEIPYKR VPSVAMKMYK EFFYKHDKER FKQYLEDVKN GKTTIAAGAL
201: LPHEIIASLK DSTGQEVAEL QWNRMVNDLA KKGKLTNCMA ICDVSGSMSG TPMEVCVALG LLISELSEEP WKGKLITFSR NPEFHMVKGK TLSEKTIFIR
301: RMDWGGFSKS MGHRLSSDTE KVQEKRLLQG VPEIVFWNLR NSKATPVPSN QQGVALVSGF SKNLVTVFLE EDGILSPEAV MIQAISGDEY QKLVVFD
101: ESVGRKLFPY DEYMDLEDAH YAYRVRIRLR KEVLVPLHKV LEIPEVYICA NKWEEIPYKR VPSVAMKMYK EFFYKHDKER FKQYLEDVKN GKTTIAAGAL
201: LPHEIIASLK DSTGQEVAEL QWNRMVNDLA KKGKLTNCMA ICDVSGSMSG TPMEVCVALG LLISELSEEP WKGKLITFSR NPEFHMVKGK TLSEKTIFIR
301: RMDWGGFSKS MGHRLSSDTE KVQEKRLLQG VPEIVFWNLR NSKATPVPSN QQGVALVSGF SKNLVTVFLE EDGILSPEAV MIQAISGDEY QKLVVFD
001: MASSSTAILL GPPSVAAMET PVSDDNSVIS QIATLNLEEP QMGLTENFSP TFLTSGNPCL DFFFHIVPDT PSDDLIQRLA ISWSHDPLTT LKLLCNLRGV
101: RGTGKSDKEG FYTAALWLYK NHPKTLALNI PTLVDFGYFK DLPEILLRIL EGQQTERGKT RVWRKRIQRK FKGDSEKKST ISGDMEDRIL ETAEETGGPV
201: GKVKARALRK QREFEKAKKA LDRYNSDANY RLLFDQIADL FAELLKSDLE YLNTDNLNKI SLASKWCPSV DSSYDKTTLI CEAIARRMFL REEYEEGIEE
301: VHYAYRIRDR LRKEVLVPLH KALELPEVSM SAKEWNLLKY NRVPSIAMQN YSSRFAEHDS ERFTEFLEDV KSGKKKMAAG ALLPHQIISQ LLNDSEGEEV
401: AELQWARMVD DLAKKGKLKN SLAICDVSGS MAGTPMNVCI ALGLLVSELN EEPWKGKVIT FSENPQLHVV TGSSLREKTK FVREMDFGIN TDFQKVFDRI
501: LEVAVENNLT DEQMIKRLFV FSDMEFDDAR VDSHSEMSDY ASNLESDYES VPESFEKWET DYEVVQRKYK EKGFQNVPEI VFWNLRDSSA TPVVSKQKGV
601: AMVSGFSKNL LTLFLEEGGI VNPEDVMLLA IKGEEYQKLA VYD
101: RGTGKSDKEG FYTAALWLYK NHPKTLALNI PTLVDFGYFK DLPEILLRIL EGQQTERGKT RVWRKRIQRK FKGDSEKKST ISGDMEDRIL ETAEETGGPV
201: GKVKARALRK QREFEKAKKA LDRYNSDANY RLLFDQIADL FAELLKSDLE YLNTDNLNKI SLASKWCPSV DSSYDKTTLI CEAIARRMFL REEYEEGIEE
301: VHYAYRIRDR LRKEVLVPLH KALELPEVSM SAKEWNLLKY NRVPSIAMQN YSSRFAEHDS ERFTEFLEDV KSGKKKMAAG ALLPHQIISQ LLNDSEGEEV
401: AELQWARMVD DLAKKGKLKN SLAICDVSGS MAGTPMNVCI ALGLLVSELN EEPWKGKVIT FSENPQLHVV TGSSLREKTK FVREMDFGIN TDFQKVFDRI
501: LEVAVENNLT DEQMIKRLFV FSDMEFDDAR VDSHSEMSDY ASNLESDYES VPESFEKWET DYEVVQRKYK EKGFQNVPEI VFWNLRDSSA TPVVSKQKGV
601: AMVSGFSKNL LTLFLEEGGI VNPEDVMLLA IKGEEYQKLA VYD
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9LSX2]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.