Factsheet for TraesCS5A01G302600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G309300.1	Wheat	plastid	95.72	95.99
TraesCS5B01G302900.1	Wheat	plastid	95.29	95.02
TraesCS5A01G319700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	50.5	85.1
HORVU5Hr1G079390.2	Barley	cytosol, nucleus, plastid	63.91	82.5
Os09t0499500-01	Rice	cytosol	15.55	81.95
TraesCS1A01G354300.1	Wheat	cytosol	81.31	81.2
TraesCS6A01G073400.1	Wheat	cytosol, peroxisome, plastid	63.91	79.15
OQU84313	Sorghum	mitochondrion	67.47	70.91
EER88676	Sorghum	mitochondrion, plastid	69.19	68.6
EER93519	Sorghum	mitochondrion	66.62	67.39
PGSC0003DMT400094367	Potato	cytosol	8.99	59.43
CDX86854	Canola	cytosol	24.11	58.28
CDX69659	Canola	cytosol	22.25	56.52
VIT_05s0049g00640.t01	Wine grape	cytosol	6.42	55.56
CDX99560	Canola	cytosol	10.7	55.15
CDY60899	Canola	cytosol	23.97	55.08
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	48.07	54.44
TraesCS6A01G148700.1	Wheat	cytosol	48.22	52.65
Solyc09g089940.1.1	Tomato	cytosol	47.22	51.96
TraesCS6A01G149200.1	Wheat	cytosol	47.79	51.62
Solyc01g009530.1.1	Tomato	cytosol	15.69	51.4
CDY09774	Canola	cytosol, plastid	47.5	51.31
PGSC0003DMT400044378	Potato	cytosol	46.51	51.18
PGSC0003DMT400070342	Potato	cytosol	28.96	51.13
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.13	51.02
Zm00001d045614_P001	Maize	mitochondrion	6.56	50.55
Solyc01g009540.1.1	Tomato	cytosol	6.85	50.53
Bra035287.1-P	Field mustard	cytosol	42.51	50.25
PGSC0003DMT400030584	Potato	cytosol, plastid	43.79	50.16
Bra008847.1-P	Field mustard	nucleus, plastid	47.65	50.15
CDY22349	Canola	plastid	43.51	49.84
KRH75085	Soybean	cytosol, plastid	45.79	49.69
AT5G13210.1	Thale cress	cytosol, plastid	47.22	49.18
Bra033679.1-P	Field mustard	plastid	44.94	48.91
VIT_05s0049g00560.t01	Wine grape	cytosol	36.38	48.3
AT5G43400.1	Thale cress	plastid	44.37	47.48
AT5G43390.1	Thale cress	cytosol, plastid	43.51	47.43
TraesCS5A01G302500.1	Wheat	cytosol, plastid	41.65	46.2
TraesCS7A01G503000.1	Wheat	mitochondrion	45.08	46.06
CDX69660	Canola	plastid	22.11	45.06
VIT_05s0049g00650.t01	Wine grape	cytosol	8.27	43.94
AT3G24780.1	Thale cress	nucleus	44.08	43.22
CDX99561	Canola	nucleus, plastid	15.83	35.02
CDX86853	Canola	endoplasmic reticulum, extracellular	7.28	27.42

Protein Annotations

EnsemblPlants:TraesCS5A01G302600.1	EnsemblPlantsGene:TraesCS5A01G302600	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
PANTHER:PTHR31373	PANTHER:PTHR31373:SF2	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	SUPFAM:SSF53300
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:512059525..512061893

Molecular Weight (calculated)

77898.6 Da

IEP (calculated)

8.732

GRAVY (calculated)

-0.273

Length

701 amino acids

Sequence
(BLAST)

001: MATQTEPAAP PRRLLGPPVI RAARPSPGPA DVAAPASHPF LDLLDAAFNA PSAAEAKAAL KPRRALTENC SATYANSGNP CLDLFFQVVP DTPPERVRAL
101: LAAAWAHDAL TALKLACNLR GVRGTGKSDK EGFYAAALWL HDNHPRTLAC NVAALAEFGY LKDFPELLFR LIHGPDVRKV AREGAAAEKV RRKEKDFAKQ
201: REALRASLAS RKRARELAPV PPKATFGDFL SAALSKAGRK PMEVETVPVS VAVQEPAEQK PEEMEVDVDQ KKKPRRMSKK VRKVAKLAVQ SLETYYGDSA
301: YRFLFEAVAD FFAALLASDL EQLAAGGKKR KIGLAAKWCP TPGSSFDRTT LLCEAIARRL FPRDSDPEYA QLTDEHYTYR ALHRLRREVL VPLRKVLELP
401: EVYMSAQRWS ELPYTRVASV AMRRYKFLFK KHDEERFDKY LEDVEAGKAK ISAGALLPHE IAASALSGVE DDVSELQWRR MVDDLRSKGA LSNCISVCDV
501: SGSMHGTPMH VCIALGVLTS ELSEEPWAGK VITFSERPEI HLIKGKTLRE KMSFVESMQW DMNTNFQAVF DQILSTAVEA RLAPEKMIRT IFVYSDMEFD
601: QASATGGYYA RSRSWDTDYE VICKKFRAAG YGDVVPQIIF WNLRDSKSTP VTSTQPGVAM VSGFSKNLLK IFLKNDGVVN PEAIMMEAIA GEEYQKLEVF
701: D

Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)

001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD

Arabidopsis Description

AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.