Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- nucleus 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g009540.1.1 | Tomato | cytosol | 38.64 | 53.68 |
| Os09t0499500-01 | Rice | cytosol | 42.42 | 42.11 |
| CDX99560 | Canola | cytosol | 38.64 | 37.5 |
| CDX69659 | Canola | cytosol | 43.94 | 21.01 |
| CDX86854 | Canola | cytosol | 42.42 | 19.31 |
| TraesCS5A01G319700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 42.42 | 13.46 |
| VIT_05s0049g00560.t01 | Wine grape | cytosol | 53.03 | 13.26 |
| TraesCS7D01G490500.1 | Wheat | cytosol | 48.48 | 12.98 |
| VIT_01s0146g00440.t01 | Wine grape | cytosol, mitochondrion | 54.55 | 11.63 |
| TraesCS7D01G496700.1 | Wheat | cytosol | 38.64 | 11.59 |
| TraesCS7B01G410900.1 | Wheat | cytosol, nucleus, plastid | 40.91 | 11.56 |
| PGSC0003DMT400030584 | Potato | cytosol, plastid | 52.27 | 11.27 |
| KRH75085 | Soybean | cytosol, plastid | 52.27 | 10.68 |
| TraesCS7B01G410500.1 | Wheat | mitochondrion, plastid | 49.24 | 10.35 |
| GSMUA_AchrUn_... | Banana | cytosol, plastid | 46.21 | 10.22 |
| TraesCS6B01G177100.1 | Wheat | cytosol | 48.48 | 10.11 |
| TraesCS6D01G138100.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 48.48 | 10.05 |
| Os06t0652100-00 | Rice | mitochondrion | 48.48 | 9.98 |
| TraesCS6A01G148700.1 | Wheat | cytosol | 48.48 | 9.97 |
| Os02t0179600-01 | Rice | extracellular | 49.24 | 9.91 |
| TraesCS6B01G176900.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 48.48 | 9.88 |
| TraesCS6A01G149200.1 | Wheat | cytosol | 48.48 | 9.86 |
| KXG29624 | Sorghum | cytosol | 49.24 | 9.82 |
| HORVU6Hr1G029540.1 | Barley | cytosol, nucleus, peroxisome | 48.48 | 9.8 |
| HORVU7Hr1G112970.1 | Barley | cytosol, nucleus | 47.73 | 9.78 |
| TraesCS7D01G490900.1 | Wheat | mitochondrion | 47.73 | 9.74 |
| Zm00001d053740_P001 | Maize | cytosol | 47.73 | 9.62 |
| EER88742 | Sorghum | plastid | 47.73 | 9.52 |
| CDY09774 | Canola | cytosol, plastid | 46.21 | 9.4 |
| TraesCS6A01G073400.1 | Wheat | cytosol, peroxisome, plastid | 40.15 | 9.36 |
| AT5G13210.1 | Thale cress | cytosol, plastid | 47.73 | 9.36 |
| TraesCS3D01G541900.1 | Wheat | mitochondrion | 34.85 | 9.29 |
| Bra035287.1-P | Field mustard | cytosol | 41.67 | 9.27 |
| Bra008847.1-P | Field mustard | nucleus, plastid | 46.21 | 9.16 |
| TraesCS7A01G503000.1 | Wheat | mitochondrion | 46.21 | 8.89 |
| OQU84313 | Sorghum | mitochondrion | 44.7 | 8.85 |
| EER88676 | Sorghum | mitochondrion, plastid | 46.21 | 8.63 |
| TraesCS5B01G302900.1 | Wheat | plastid | 45.45 | 8.53 |
| EER93519 | Sorghum | mitochondrion | 44.7 | 8.51 |
| TraesCS7D01G490400.1 | Wheat | mitochondrion | 44.7 | 8.46 |
| TraesCS7B01G410400.1 | Wheat | mitochondrion | 44.7 | 8.42 |
| TraesCS5A01G302600.1 | Wheat | plastid | 43.94 | 8.27 |
| TraesCS5D01G309300.1 | Wheat | plastid | 43.18 | 8.15 |
| TraesCS7B01G301000.1 | Wheat | cytosol | 43.18 | 8.14 |
| TraesCS1A01G354300.1 | Wheat | cytosol | 43.18 | 8.12 |
| TraesCS1D01G356100.1 | Wheat | cytosol, nucleus, peroxisome | 43.18 | 8.1 |
| HORVU6Hr1G013080.3 | Barley | nucleus, peroxisome | 43.18 | 8.1 |
| TraesCS5D01G325700.1 | Wheat | cytosol, nucleus, plastid | 42.42 | 8.09 |
| TraesCS1B01G367400.1 | Wheat | cytosol | 42.42 | 7.98 |
| TraesCS5B01G302800.1 | Wheat | cytosol, plastid | 37.88 | 7.96 |
| TraesCS5D01G309200.1 | Wheat | plastid | 37.88 | 7.94 |
| TraesCS5B01G319900.1 | Wheat | cytosol, nucleus, peroxisome | 41.67 | 7.93 |
| Os09t0499400-01 | Rice | vacuole | 35.61 | 7.91 |
| EES01714 | Sorghum | plastid | 36.36 | 7.77 |
| TraesCS5A01G302500.1 | Wheat | cytosol, plastid | 37.12 | 7.75 |
| TraesCS7D01G394600.1 | Wheat | cytosol | 40.91 | 7.75 |
| TraesCS6D01G138500.1 | Wheat | mitochondrion, plastid | 19.7 | 7.72 |
| KXG37641 | Sorghum | plastid | 36.36 | 7.62 |
| TraesCS6D01G071700.1 | Wheat | cytosol | 40.91 | 7.61 |
| TraesCS7B01G417500.1 | Wheat | cytosol, plastid | 38.64 | 7.57 |
| TraesCS6B01G098400.1 | Wheat | cytosol | 40.15 | 7.46 |
| TraesCS3B01G607400.1 | Wheat | cytosol | 36.36 | 7.43 |
| TraesCS5B01G320000.1 | Wheat | cytosol | 41.67 | 7.42 |
| HORVU5Hr1G081560.3 | Barley | nucleus | 38.64 | 7.25 |
| AT3G24780.1 | Thale cress | nucleus | 38.64 | 7.13 |
| OQU88215 | Sorghum | cytosol | 20.45 | 6.75 |
| PGSC0003DMT400030583 | Potato | cytosol, vacuole | 4.55 | 6.12 |
| HORVU7Hr1G112960.3 | Barley | nucleus | 28.03 | 5.98 |
| Zm00001d045614_P001 | Maize | mitochondrion | 3.79 | 5.49 |
| HORVU5Hr1G079400.3 | Barley | cytosol, nucleus, plastid | 24.24 | 5.12 |
| Solyc01g009530.1.1 | Tomato | cytosol | 3.79 | 2.34 |
| HORVU5Hr1G079390.2 | Barley | cytosol, nucleus, plastid | 6.06 | 1.47 |
| CDX69660 | Canola | plastid | 2.27 | 0.87 |
| HORVU3Hr1G117270.1 | Barley | cytosol | 1.52 | 0.61 |
| Os12t0141800-01 | Rice | cytosol, mitochondrion, peroxisome, plastid | 0.76 | 0.55 |
| VIT_05s0049g00640.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_05s0049g00650 | EMBL:FN595496 | EnsemblPlants:VIT_05s0049g00650.t01 | EnsemblPlantsGene:VIT_05s0049g00650 | InterPro:DUF2828 | InterPro:UCP015417_vWA |
| PANTHER:PTHR31373 | PFAM:PF11443 | PIRSF:PIRSF015417 | ProteinID:CCB48557 | ProteinID:CCB48557.1 | UniParc:UPI0002108424 |
| UniProt:F6H8L0 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:7682277..7682680
Molecular Weight (calculated)
15391.1 Da
IEP (calculated)
4.092
GRAVY (calculated)
-0.440
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEDQMIKRV FVFSDMEFDE ACGRYNYCDY DYDMEEIDES QKASQKWETD YEVIQRKFQE KGYRKVPEIV FWNLRNSSAT PVTATENGVA LVSGFSKNLL
101: TLFLEGGGIL IPQDVMEFAI SDEDYKKLVL FD
101: TLFLEGGGIL IPQDVMEFAI SDEDYKKLVL FD
001: MASSTTILLG PPSVAGNSPI IKPIHSPETH ISDENTLISQ TATLNLEEPP PMGLTENFSP TFLSSGNPCL DFFFHIVPDT SPDDLIQRLA ISWSHDPLTT
101: LKLICNLRGV RGTGKSDKEG FYTAAFWLYK NHPKTLALNV PALVDFGYFK DLPEILFRIL EGQNMERGKN RVWRKRVQRK FKGKREKKSE ISGEMEDRIL
201: ENAEEIGGSV DKVKARALRK QREFEKAKKA VTRYNSDANY RLLFDRIADL FAVLLKSDLK YLNSNGLTKI SLASKWCPSV DSSYDKATLI CEAIARRMFP
301: REEYEGIEEA HYAYRIRDRL RKEVLVPLHK ALEFPELFMS AKEWNLLKYN RVPSVAMKNY KKLFEEHDSE RFTEFLEDVK SGKKKIAAGA LLPHQIINQL
401: EDDSGSEVGA EVAELQWARM VDDLAKKGKL KNSLAVCDVS GSMSGTPMEV CVALGLLVSE LSEEPWKGKV ITFSENPELH IVTGSSLREK TQFVREMEWG
501: MNTDFQIVFD RILEVAVENN LTDDQMIKRL FVFSDMEFDD AMANSHSEVS YHLSVEDRLK ISKERSKEKW ETDYEVVQRK YKEKGFQNVP EMVFWNLRDS
601: SATPVVANQK GVAMVSGFSK NLLTLFLEEG GIVNPEDVMW IAIKGEEYKK LVVFD
101: LKLICNLRGV RGTGKSDKEG FYTAAFWLYK NHPKTLALNV PALVDFGYFK DLPEILFRIL EGQNMERGKN RVWRKRVQRK FKGKREKKSE ISGEMEDRIL
201: ENAEEIGGSV DKVKARALRK QREFEKAKKA VTRYNSDANY RLLFDRIADL FAVLLKSDLK YLNSNGLTKI SLASKWCPSV DSSYDKATLI CEAIARRMFP
301: REEYEGIEEA HYAYRIRDRL RKEVLVPLHK ALEFPELFMS AKEWNLLKYN RVPSVAMKNY KKLFEEHDSE RFTEFLEDVK SGKKKIAAGA LLPHQIINQL
401: EDDSGSEVGA EVAELQWARM VDDLAKKGKL KNSLAVCDVS GSMSGTPMEV CVALGLLVSE LSEEPWKGKV ITFSENPELH IVTGSSLREK TQFVREMEWG
501: MNTDFQIVFD RILEVAVENN LTDDQMIKRL FVFSDMEFDD AMANSHSEVS YHLSVEDRLK ISKERSKEKW ETDYEVVQRK YKEKGFQNVP EMVFWNLRDS
601: SATPVVANQK GVAMVSGFSK NLLTLFLEEG GIVNPEDVMW IAIKGEEYKK LVVFD
Arabidopsis Description
AT5g43400/MWF20_9 [Source:UniProtKB/TrEMBL;Acc:Q94AE4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.