Factsheet for HORVU6Hr1G013080.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus

Predictor Summary:

plastid 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome
Any Predictor:	nucleus, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G073400.1	Wheat	cytosol, peroxisome, plastid	72.44	90.11
TraesCS6D01G071700.1	Wheat	cytosol	89.91	89.15
TraesCS6B01G098400.1	Wheat	cytosol	89.49	88.73
Os09t0499500-01	Rice	cytosol	15.2	80.45
HORVU5Hr1G079390.2	Barley	cytosol, nucleus, plastid	58.81	76.24
OQU84313	Sorghum	mitochondrion	66.62	70.31
EER88676	Sorghum	mitochondrion, plastid	67.76	67.47
EER93519	Sorghum	mitochondrion	65.48	66.52
HORVU5Hr1G081560.3	Barley	nucleus	61.79	61.88
CDX86854	Canola	cytosol	24.43	59.31
VIT_05s0049g00640.t01	Wine grape	cytosol	6.68	58.02
PGSC0003DMT400094367	Potato	cytosol	8.66	57.55
CDX69659	Canola	cytosol	21.73	55.43
CDX99560	Canola	cytosol	10.51	54.41
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	47.44	53.96
CDY60899	Canola	cytosol	22.87	52.79
Solyc09g089940.1.1	Tomato	cytosol	47.73	52.75
PGSC0003DMT400044378	Potato	cytosol	47.02	51.96
Solyc01g009530.1.1	Tomato	cytosol	15.77	51.87
HORVU6Hr1G029540.1	Barley	cytosol, nucleus, peroxisome	47.44	51.15
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.1	51.02
PGSC0003DMT400030584	Potato	cytosol, plastid	44.32	50.98
PGSC0003DMT400070342	Potato	cytosol	28.55	50.63
CDY09774	Canola	cytosol, plastid	46.59	50.54
HORVU7Hr1G112970.1	Barley	cytosol, nucleus	45.74	50.0
Bra035287.1-P	Field mustard	cytosol	42.05	49.92
Bra008847.1-P	Field mustard	nucleus, plastid	46.73	49.4
KRH75085	Soybean	cytosol, plastid	45.31	49.38
VIT_05s0049g00560.t01	Wine grape	cytosol	36.79	49.05
AT5G13210.1	Thale cress	cytosol, plastid	46.45	48.59
CDY22349	Canola	plastid	42.19	48.53
Bra033679.1-P	Field mustard	plastid	43.61	47.67
Solyc01g009540.1.1	Tomato	cytosol	6.39	47.37
AT5G43390.1	Thale cress	cytosol, plastid	42.9	46.97
Zm00001d045614_P001	Maize	mitochondrion	5.97	46.15
AT5G43400.1	Thale cress	plastid	42.76	45.95
CDX69660	Canola	plastid	21.73	44.48
AT3G24780.1	Thale cress	nucleus	44.46	43.78
VIT_05s0049g00650.t01	Wine grape	cytosol	8.1	43.18
HORVU5Hr1G079400.3	Barley	cytosol, nucleus, plastid	38.07	42.88
HORVU3Hr1G117270.1	Barley	cytosol	18.61	40.18
HORVU7Hr1G112960.3	Barley	nucleus	31.96	36.35
CDX99561	Canola	nucleus, plastid	15.77	35.02
CDX86853	Canola	endoplasmic reticulum, extracellular	7.24	27.42

Protein Annotations

EnsemblPlants:HORVU6Hr1G013080.3	EnsemblPlantsGene:HORVU6Hr1G013080	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
ncoils:Coil	PANTHER:PTHR31373	PANTHER:PTHR31373:SF2	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg
SUPFAM:SSF53300	UniParc:UPI000B4863D0	UniProt:A0A287TCW0	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr6H:-:26033126..26035240

Molecular Weight (calculated)

78166.6 Da

IEP (calculated)

9.348

GRAVY (calculated)

-0.338

Length

704 amino acids

Sequence
(BLAST)

001: RETETPAAAP CLLLGPPLIR AARPSPAAAA AGDDTDASHP FLDLLDAAFN APSAAEMKAA LTPRRALTGN CSATYANSGN PCLDFFFQVV PDTPAERVRS
101: LLAAAWTHDP LTALKLACNL RGVRGTGKSD KEGFYAAALW MHDNHPKTLA CNVAALAEFG YLKDFPELLF RLIHGADVRK VAKAGAEADK VRRKAKDLAK
201: QRESLRDRLA GRKRARELAS VPAKATFGDF LSAALSKSGK GKPMEAETAP VAVQEPKTEA MEVDAEKTAA NKPRRMSKKV RKVAKLAVQS LETYYGDRAY
301: RFLFDAVAEF FAALLKSDLE QLAPKGKKRK IGLAAKWCPT PGSSFDRTTL LCEAIARRVF PRDSDPELAQ LSDDHYTYQV LRRLRREVLV PLRQVLELPE
401: VYMSAQRWSE LPYNRVASVA MRRYKFLFKK HDEERFEQYL EDVEDGKAKI SAGALLPHEI AASAYRGEDD NVSELQWRRM VDDLRSKGSL RNCISVCDVS
501: GSMNGTPMEV CIALGVLTSE LSEEPWAGKV ITFSSTPEIH LIKGKTLRKK MDFVRHMQWN LSTNFQAVFD KILRTAVNAR LAPEKMIRTV FVYSDMEFNE
601: ASGHGGGHYG SRRTSESWDT DYNVICRKFR DAGYGNVVPQ IIFWNLRDSK STPVTSTQPG VAMVSGFSKN FLKIFLQNDG VVNPEAIMMQ AIAGDEYQKL
701: AVYD

Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)

001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD

Arabidopsis Description

AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.