CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69659	Canola	cytosol	39.45	92.75
CDX69660	Canola	plastid	47.15	88.95
CDX86854	Canola	cytosol	35.9	80.34
CDX99560	Canola	cytosol	15.56	74.26
PGSC0003DMT400030583	Potato	cytosol, vacuole	10.94	72.45
AT5G13210.1	Thale cress	cytosol, plastid	74.58	71.92
Os09t0499500-01	Rice	cytosol	13.25	64.66
PGSC0003DMT400030584	Potato	cytosol, plastid	60.71	64.38
AT3G24780.1	Thale cress	nucleus	68.57	62.24
CDY60899	Canola	cytosol	28.81	61.31
Solyc01g009530.1.1	Tomato	cytosol	19.88	60.28
KRH75085	Soybean	cytosol, plastid	58.71	58.98
CDY22349	Canola	plastid	54.24	57.52
Solyc01g009540.1.1	Tomato	cytosol	8.32	56.84
CDX99561	Canola	nucleus, plastid	27.73	56.78
TraesCS5A01G319700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	35.13	54.81
GSMUA_AchrUn_...	Banana	cytosol, plastid	48.84	53.1
TraesCS7D01G490500.1	Wheat	cytosol	39.91	52.54
TraesCS6D01G138100.1	Wheat	cytosol, nucleus, peroxisome, plastid	50.69	51.65
Os02t0179600-01	Rice	extracellular	52.08	51.52
TraesCS7B01G410900.1	Wheat	cytosol, nucleus, plastid	36.98	51.39
TraesCS7D01G496700.1	Wheat	cytosol	34.82	51.36
TraesCS6A01G148700.1	Wheat	cytosol	50.23	50.78
TraesCS6B01G176900.1	Wheat	cytosol, nucleus, peroxisome, plastid	50.69	50.77
TraesCS7B01G410500.1	Wheat	mitochondrion, plastid	48.54	50.16
Zm00001d053740_P001	Maize	cytosol	50.39	49.92
OQU84313	Sorghum	mitochondrion	51.16	49.78
EER88742	Sorghum	plastid	50.39	49.4
HORVU6Hr1G029540.1	Barley	cytosol, nucleus, peroxisome	49.46	49.16
KXG29624	Sorghum	cytosol	50.08	49.09
HORVU7Hr1G112970.1	Barley	cytosol, nucleus	48.69	49.07
Os06t0652100-00	Rice	mitochondrion	47.77	48.36
EER88676	Sorghum	mitochondrion, plastid	52.54	48.23
TraesCS6A01G149200.1	Wheat	cytosol	48.23	48.23
TraesCS7D01G490900.1	Wheat	mitochondrion	48.07	48.22
EER93519	Sorghum	mitochondrion	51.31	48.05
TraesCS6B01G177100.1	Wheat	cytosol	46.84	48.03
TraesCS5A01G302600.1	Wheat	plastid	51.31	47.5
TraesCS7B01G417500.1	Wheat	cytosol, plastid	49.0	47.18
TraesCS5D01G309300.1	Wheat	plastid	50.54	46.92
TraesCS5B01G302900.1	Wheat	plastid	50.69	46.8
CDX86853	Canola	endoplasmic reticulum, extracellular	13.41	46.77
TraesCS1D01G356100.1	Wheat	cytosol, nucleus, peroxisome	50.69	46.73
TraesCS1B01G367400.1	Wheat	cytosol	50.54	46.72
TraesCS1A01G354300.1	Wheat	cytosol	50.54	46.72
TraesCS5D01G325700.1	Wheat	cytosol, nucleus, plastid	49.77	46.68
HORVU6Hr1G013080.3	Barley	nucleus, peroxisome	50.54	46.59
TraesCS7B01G301000.1	Wheat	cytosol	50.08	46.43
TraesCS7D01G394600.1	Wheat	cytosol	49.77	46.34
VIT_05s0049g00650.t01	Wine grape	cytosol	9.4	46.21
TraesCS6B01G098400.1	Wheat	cytosol	50.54	46.2
Zm00001d045614_P001	Maize	mitochondrion	6.47	46.15
TraesCS5B01G319900.1	Wheat	cytosol, nucleus, peroxisome	49.15	45.97
TraesCS6D01G071700.1	Wheat	cytosol	50.23	45.92
TraesCS6A01G073400.1	Wheat	cytosol, peroxisome, plastid	39.91	45.76
TraesCS7A01G503000.1	Wheat	mitochondrion	47.92	45.34
TraesCS3D01G541900.1	Wheat	mitochondrion	34.36	45.05
TraesCS7D01G490400.1	Wheat	mitochondrion	48.23	44.91
TraesCS7B01G410400.1	Wheat	mitochondrion	48.07	44.51
TraesCS6D01G138500.1	Wheat	mitochondrion, plastid	22.96	44.21
TraesCS5B01G320000.1	Wheat	cytosol	49.61	43.45
TraesCS5B01G302800.1	Wheat	cytosol, plastid	41.91	43.31
EES01714	Sorghum	plastid	41.14	43.2
TraesCS5A01G302500.1	Wheat	cytosol, plastid	41.91	43.04
TraesCS5D01G309200.1	Wheat	plastid	41.6	42.86
Os09t0499400-01	Rice	vacuole	38.83	42.42
KXG37641	Sorghum	plastid	41.14	42.38
HORVU5Hr1G079390.2	Barley	cytosol, nucleus, plastid	35.13	41.99
TraesCS3B01G607400.1	Wheat	cytosol	41.14	41.33
HORVU5Hr1G079400.3	Barley	cytosol, nucleus, plastid	38.52	40.0
HORVU5Hr1G081560.3	Barley	nucleus	41.91	38.69
HORVU7Hr1G112960.3	Barley	nucleus	35.9	37.64
HORVU3Hr1G117270.1	Barley	cytosol	17.57	34.97
Os12t0141800-01	Rice	cytosol, mitochondrion, peroxisome, plastid	8.32	29.51
OQU88215	Sorghum	cytosol	17.87	29.0

Protein Annotations

EnsemblPlants:CDY09774	EnsemblPlantsGene:GSBRNA2T00031475001	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
ncoils:Coil	PANTHER:PTHR31373	PFAM:PF11443	PIRSF:PIRSF015417	ProteinID:CDY09774	ProteinID:CDY09774.1
SEG:seg	SUPFAM:SSF53300	UniParc:UPI0004EDDA09	UniProt:A0A078F9S8	MapMan:35.2	:

Description

BnaC09g43870DBnaC09g43870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9S8]

Coordinates

chrLK031999:+:23806..25806

Molecular Weight (calculated)

73122.6 Da

IEP (calculated)

9.273

GRAVY (calculated)

-0.488

Length

649 amino acids

Sequence
(BLAST)

001: MASPLLGPPE LQDSNSPLPA SGPSDPFMDL MVSNFNKSTK VKVSPSPPMG LTENGAATYL SAGNPCLDFF FHVVPSTPKE SIEQRLSTAW SHDALTTLKL
101: ICNLRGVRGT GKSDKEGFYT AALWLHGCHP KTLACNLDSL SKFGYFKDFP EILYRILQGF EIRRVQKSEW QQRKGRRSGP RSGGGRGRAR APFYIDLSRS
201: SHKGRGRKKP AATREMRIAN AEKRNQEKKE KASLDRKLEK ISMGKKAFTR YSQDPDYRFL HERVSDLFAD YLKKDLEFLT SGETNKISLA AKWCPSLDSS
301: FDKATLLCES IARRIFPRES FPEYEGVEEA HYAYRVRDRL RKQVLVPLRK TLQLPEVYMG AKEWGSLPYN RVASVAMKSY KEIFLNHDAE RFQKYLQDAR
401: EGKTKIAAGA VLPHEIIGEL EGGDGGQVAE LQWKRMVDDL KKKGSLTRCI AISDVSGSMA GDPMEVSVAL GLLISELTEE PWRGKMITFS GDPELQVVEG
501: DDLRSKTKFV RRMKWGMNTD FQKVFDLILK VAVDGRLKPE EMIKRVFVFS DMEFDQAADA NTWETDYEAI ARKYREAGYG DVVPEIVFWY LRDSSSTPVN
601: GSKKGVALVS GFSKNLIKMF LDNDGGIDPM AIMEDAISKE EYSKLVVVD

Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)

001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD

Arabidopsis Description

AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.