Factsheet for TraesCS1A01G354300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G356100.1	Wheat	cytosol, nucleus, peroxisome	95.58	95.31
TraesCS1B01G367400.1	Wheat	cytosol	92.88	92.88
TraesCS5A01G319700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	51.28	86.54
TraesCS6A01G073400.1	Wheat	cytosol, peroxisome, plastid	66.1	81.98
TraesCS5A01G302600.1	Wheat	plastid	81.2	81.31
Os09t0499500-01	Rice	cytosol	15.38	81.2
OQU84313	Sorghum	mitochondrion	66.67	70.16
EER88676	Sorghum	mitochondrion, plastid	68.38	67.89
EER93519	Sorghum	mitochondrion	65.95	66.81
CDX86854	Canola	cytosol	24.64	59.66
PGSC0003DMT400094367	Potato	cytosol	8.83	58.49
CDX69659	Canola	cytosol	22.65	57.61
VIT_05s0049g00640.t01	Wine grape	cytosol	6.55	56.79
CDX99560	Canola	cytosol	10.83	55.88
CDY60899	Canola	cytosol	24.07	55.41
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.69	55.1
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	46.72	52.99
TraesCS6A01G148700.1	Wheat	cytosol	47.86	52.34
Solyc09g089940.1.1	Tomato	cytosol	47.29	52.12
Zm00001d045614_P001	Maize	mitochondrion	6.7	51.65
PGSC0003DMT400044378	Potato	cytosol	46.58	51.33
TraesCS6A01G149200.1	Wheat	cytosol	47.44	51.31
PGSC0003DMT400070342	Potato	cytosol	28.92	51.13
PGSC0003DMT400030584	Potato	cytosol, plastid	44.16	50.65
CDY09774	Canola	cytosol, plastid	46.72	50.54
Bra008847.1-P	Field mustard	nucleus, plastid	47.72	50.3
Solyc01g009530.1.1	Tomato	cytosol	15.24	50.0
Bra035287.1-P	Field mustard	cytosol	42.17	49.92
Solyc01g009540.1.1	Tomato	cytosol	6.7	49.47
CDY22349	Canola	plastid	43.02	49.35
KRH75085	Soybean	cytosol, plastid	45.16	49.07
VIT_05s0049g00560.t01	Wine grape	cytosol	36.89	49.05
Bra033679.1-P	Field mustard	plastid	44.73	48.76
AT5G13210.1	Thale cress	cytosol, plastid	46.3	48.29
AT5G43390.1	Thale cress	cytosol, plastid	43.59	47.59
AT5G43400.1	Thale cress	plastid	43.73	46.87
TraesCS7A01G503000.1	Wheat	mitochondrion	44.73	45.77
TraesCS5A01G302500.1	Wheat	cytosol, plastid	40.31	44.78
VIT_05s0049g00650.t01	Wine grape	cytosol	8.12	43.18
AT3G24780.1	Thale cress	nucleus	43.59	42.8
CDX69660	Canola	plastid	20.94	42.73
CDX99561	Canola	nucleus, plastid	15.38	34.07
CDX86853	Canola	endoplasmic reticulum, extracellular	7.41	27.96

Protein Annotations

EnsemblPlants:TraesCS1A01G354300.1	EnsemblPlantsGene:TraesCS1A01G354300	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
ncoils:Coil	PANTHER:PTHR31373	PANTHER:PTHR31373:SF2	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg
SUPFAM:SSF53300	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:537344748..537347843

Molecular Weight (calculated)

77932.6 Da

IEP (calculated)

9.388

GRAVY (calculated)

-0.285

Length

702 amino acids

Sequence
(BLAST)

001: MATETEPTAA QRLLLGPPLI RAARPSPDSS AAATGDASHP FLDLLDAAFN APSPAALKPR RALTENCSAT YANSGNPCLD LFFQVVPDTP ADRVRQLLAA
101: AWAQDAPTAL RLACNLRGVR GTGKSDKEGF YAAALWMHEH HPRTLACNVA ALAEFGYLKD FPELLFRLLR GPDVRALAKA GAEADKARRK AKGLATQREG
201: LRARLAGRKR ARELAPVPPK ATFGDFLSAA LSKAGKGSKP VEIVPVQEPA EVQKPEAMEV DQKKTTAASK PRRMSKKVRT VAKLAVQSLE TYYGDRAYRF
301: LFDAVADFFA ALLTSDLEQL ASGGKKRKIG LAAKWCPTPG SSFDRTTLLC EAIARRLFPR DSDPELTQLS DEHYAYHALH RLRRKVLVPL RKVLELPEVY
401: MSAQRWSELP YTRVASVAMR RYKFLFKKHD EERFDKYLED VEAGKAKIAA GALLPHEIAA AAYRGQDDNV SELQWRRMVD DLRSKGSLRN CISVCDVSAS
501: MSGTPMEVCI ALGVLTSELS EEPWAGKVIT FSENPEIHLI KGKTLRQKMD FVRHMHWGGS TNFQGVFDQI LRTAVEVSLA PEKMIRTVFV YSDMEFNMAS
601: GSAYAYYYSR RESVPWETDY EVICKKFRDA GYGDVVPQII FWNLRDSKST PVTSTQPGVA MVSGFSKNFL KIFLKNDGVV NPEAIMMEAI AGEEYQKLVV
701: YD

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.