Factsheet for TraesCS6A01G073400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G319700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	61.13	83.17
Os09t0499500-01	Rice	cytosol	18.9	80.45
TraesCS6D01G071700.1	Wheat	cytosol	96.82	77.18
TraesCS6B01G098400.1	Wheat	cytosol	95.23	75.92
HORVU6Hr1G013080.3	Barley	nucleus, peroxisome	90.11	72.44
TraesCS1A01G354300.1	Wheat	cytosol	81.98	66.1
TraesCS5A01G302600.1	Wheat	plastid	79.15	63.91
CDX86854	Canola	cytosol	29.68	57.93
OQU84313	Sorghum	mitochondrion	67.14	56.97
PGSC0003DMT400094367	Potato	cytosol	10.42	55.66
CDX69659	Canola	cytosol	26.86	55.07
EER93519	Sorghum	mitochondrion	67.31	54.98
EER88676	Sorghum	mitochondrion, plastid	68.2	54.6
VIT_05s0049g00640.t01	Wine grape	cytosol	7.77	54.32
CDX99560	Canola	cytosol	12.9	53.68
PGSC0003DMT400030583	Potato	cytosol, vacuole	9.01	52.04
CDY60899	Canola	cytosol	26.86	49.84
PGSC0003DMT400070342	Potato	cytosol	34.1	48.61
Zm00001d045614_P001	Maize	mitochondrion	7.77	48.35
Solyc01g009540.1.1	Tomato	cytosol	7.24	43.16
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	45.94	42.0
Solyc09g089940.1.1	Tomato	cytosol	45.58	40.5
TraesCS6A01G149200.1	Wheat	cytosol	46.11	40.22
VIT_05s0049g00650.t01	Wine grape	cytosol	9.36	40.15
Bra008847.1-P	Field mustard	nucleus, plastid	47.17	40.09
PGSC0003DMT400044378	Potato	cytosol	45.05	40.03
CDY09774	Canola	cytosol, plastid	45.76	39.91
TraesCS6A01G148700.1	Wheat	cytosol	44.7	39.41
PGSC0003DMT400030584	Potato	cytosol, plastid	42.23	39.05
AT5G13210.1	Thale cress	cytosol, plastid	46.29	38.93
Bra035287.1-P	Field mustard	cytosol	40.28	38.45
KRH75085	Soybean	cytosol, plastid	43.82	38.39
VIT_05s0049g00560.t01	Wine grape	cytosol	35.69	38.26
CDY22349	Canola	plastid	40.11	37.09
Bra033679.1-P	Field mustard	plastid	42.05	36.96
AT5G43390.1	Thale cress	cytosol, plastid	40.99	36.08
AT5G43400.1	Thale cress	plastid	41.52	35.88
TraesCS5A01G302500.1	Wheat	cytosol, plastid	39.4	35.28
TraesCS7A01G503000.1	Wheat	mitochondrion	42.05	34.69
Solyc01g009530.1.1	Tomato	cytosol	13.07	34.58
AT3G24780.1	Thale cress	nucleus	43.46	34.41
CDX86853	Canola	endoplasmic reticulum, extracellular	8.83	26.88
CDX69660	Canola	plastid	14.84	24.42
CDX99561	Canola	nucleus, plastid	12.19	21.77

Protein Annotations

EnsemblPlants:TraesCS6A01G073400.1	EnsemblPlantsGene:TraesCS6A01G073400	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
PANTHER:PTHR31373	PANTHER:PTHR31373:SF2	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	SUPFAM:SSF53300
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:40298407..40300107

Molecular Weight (calculated)

63784.8 Da

IEP (calculated)

9.724

GRAVY (calculated)

-0.379

Length

566 amino acids

Sequence
(BLAST)

001: MHENHPRTLA CNVDALAEFG YLKDFPELLF RLIHGADVRK VAKAGVEDDK VRRKAKALAQ QREGLRARLA GRKRARELAP EPAKATFGDF LSAALSKFGK
101: GKPVEVETAP VAVEEPKPEA MEVDPEKTAI KPRRMSKKVR KVAKLAVQSL ETYYGDRAYR FLFDAVAEFF AALLASDLEQ LAPKGKKRKI GLAAKWCPTP
201: GSSFDRTTLL CEAIARRLFP RDSDPELAQL SDDHYTYQAL RSLRREVLVP LRKVLELPEV YMRAQRWPEL PYNRVASMAM RRYKFLFKKH DEARFDKYLE
301: DVEDGKAKIL AGALLPQEIA AAAYRGEDDN VSELQWRRMV DDLRSKGSLR NCISVYDVSG SMNGTPMEVC VALGVLTSEL SEEPWAGKVI TFSSTPEIHL
401: IKGKTLAKKM AFVKRMQWNM STNFQAVFDQ ILRTAVNARL APEKMIRTVF VYSDMEFNEA SGHSGGGYYG YGSRRSSGSW DTDYNVICKK FRDAGYGDVV
501: RQIIFWNLRD SKSTPVTSTQ PGVAMVSGFS KNFLKIFLQN DGVVNPEAIM MQAIAGDEYQ KLTVYD

Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)

001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD

Arabidopsis Description

AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.