Factsheet for TraesCS6B01G098400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G071700.1	Wheat	cytosol	96.9	96.9
TraesCS6A01G073400.1	Wheat	cytosol, peroxisome, plastid	75.92	95.23
HORVU6Hr1G013080.3	Barley	nucleus, peroxisome	88.73	89.49
TraesCS5B01G302900.1	Wheat	plastid	81.97	82.79
TraesCS1B01G367400.1	Wheat	cytosol	80.99	81.91
Os09t0499500-01	Rice	cytosol	15.07	80.45
TraesCS7B01G417500.1	Wheat	cytosol, plastid	73.52	77.45
TraesCS5B01G319900.1	Wheat	cytosol, nucleus, peroxisome	74.51	76.22
TraesCS7B01G301000.1	Wheat	cytosol	74.23	75.29
OQU84313	Sorghum	mitochondrion	67.32	71.66
TraesCS5B01G320000.1	Wheat	cytosol	74.08	70.99
EER93519	Sorghum	mitochondrion	66.48	68.11
EER88676	Sorghum	mitochondrion, plastid	67.61	67.89
CDX86854	Canola	cytosol	23.8	58.28
PGSC0003DMT400094367	Potato	cytosol	8.45	56.6
CDX69659	Canola	cytosol	21.83	56.16
VIT_05s0049g00640.t01	Wine grape	cytosol	6.2	54.32
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	47.18	54.12
CDX99560	Canola	cytosol	10.28	53.68
CDY60899	Canola	cytosol	22.54	52.46
TraesCS7B01G410500.1	Wheat	mitochondrion, plastid	46.34	52.39
Solyc09g089940.1.1	Tomato	cytosol	46.76	52.12
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.18	52.04
TraesCS7B01G410900.1	Wheat	cytosol, nucleus, plastid	34.08	51.82
TraesCS6B01G176900.1	Wheat	cytosol, nucleus, peroxisome, plastid	47.18	51.7
PGSC0003DMT400044378	Potato	cytosol	45.77	51.02
PGSC0003DMT400070342	Potato	cytosol	28.45	50.88
TraesCS6B01G177100.1	Wheat	cytosol	45.07	50.55
CDY09774	Canola	cytosol, plastid	46.2	50.54
Solyc01g009530.1.1	Tomato	cytosol	15.21	50.47
Bra008847.1-P	Field mustard	nucleus, plastid	47.18	50.3
PGSC0003DMT400030584	Potato	cytosol, plastid	43.24	50.16
Bra035287.1-P	Field mustard	cytosol	41.55	49.75
Zm00001d045614_P001	Maize	mitochondrion	6.34	49.45
AT5G13210.1	Thale cress	cytosol, plastid	46.76	49.33
KRH75085	Soybean	cytosol, plastid	44.37	48.76
CDY22349	Canola	plastid	41.55	48.2
VIT_05s0049g00560.t01	Wine grape	cytosol	35.77	48.11
Bra033679.1-P	Field mustard	plastid	43.1	47.52
AT5G43390.1	Thale cress	cytosol, plastid	41.97	46.35
AT5G43400.1	Thale cress	plastid	42.54	46.11
TraesCS7B01G410400.1	Wheat	mitochondrion	45.49	46.08
Solyc01g009540.1.1	Tomato	cytosol	6.06	45.26
TraesCS5B01G302800.1	Wheat	cytosol, plastid	39.72	44.9
TraesCS3B01G607400.1	Wheat	cytosol	40.28	44.27
CDX69660	Canola	plastid	21.13	43.6
AT3G24780.1	Thale cress	nucleus	42.96	42.66
VIT_05s0049g00650.t01	Wine grape	cytosol	7.46	40.15
CDX99561	Canola	nucleus, plastid	15.49	34.7
CDX86853	Canola	endoplasmic reticulum, extracellular	7.32	27.96

Protein Annotations

EnsemblPlants:TraesCS6B01G098400.1	EnsemblPlantsGene:TraesCS6B01G098400	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
ncoils:Coil	PANTHER:PTHR31373	PANTHER:PTHR31373:SF2	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg
SUPFAM:SSF53300	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:75941545..75943677

Molecular Weight (calculated)

78435.2 Da

IEP (calculated)

9.392

GRAVY (calculated)

-0.276

Length

710 amino acids

Sequence
(BLAST)

001: MATETEPAAA AAPCLLLGPP LIRAARPSPA TAAAAGDDTD ASHPFLDLLD AAFNAPSAEE IKAALKPRRA LTENCSATYA NSGNPCLDFF FQVVPDTPPE
101: RVRSLLAAAW THDALTALKL ACNLRGVRGT GKSDKEGFYA AALWMHENHP RTLACNVAAL AEFGYLKDFP ELLFRLIHGA DVRKVAKAGV EADKVRRKAK
201: ALAKQREGLR ARLAGRKRAR ELAPEPAKAT FGDFLSAALS KFGKGKPVEV ETAPAAVEEP KPEAMEIDSK KTADKPRRMS KKVRKVAKLA VQSLETYYGD
301: RAYRFLFDAV ADFFAALLAS DLEQLAPKGK KRKIGLAAKW CPTPGSSFDR STLLCEAIAR RLFPRDSDPE LAQLTDDHYT YQALHRLRRE VLVPLRKVLE
401: LPEVYMSAQR WSELPYNRVA SVAMRRYKFL FKKHDEARFD KYLEDVEEGK AKISAGALLP HEIAASAYRG VEDNVSELQW RRMVDDLRSK GSLRNCISVC
501: DVSGSMNGTP MEVCVALGVL TSELSEEPWA GKVITFSSTP EIHLIKGKTL AKKMAFVKRM QWNMSTNFQA VFDQILRTAV NARLAPEKMI RTVFVYSDME
601: FNQASGHGGG GYYGYGSRLS SGSWDTDYNV ICKKFRDAGY GDVVPQIIFW NLRDSKSTPV TSTQPGVAMV SGFSKNFLKI FLQNDGVVNP EAIMMQAIAG
701: DEYQKLTVYD

Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)

001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD

Arabidopsis Description

AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.