Factsheet for TraesCS5B01G302900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G302600.1	Wheat	plastid	95.02	95.29
TraesCS5D01G309300.1	Wheat	plastid	94.45	94.99
Os09t0499500-01	Rice	cytosol	16.07	84.96
HORVU5Hr1G079390.2	Barley	cytosol, nucleus, plastid	64.01	82.87
TraesCS6B01G098400.1	Wheat	cytosol	82.79	81.97
TraesCS1B01G367400.1	Wheat	cytosol	80.23	80.34
TraesCS7B01G301000.1	Wheat	cytosol	76.53	76.86
TraesCS7B01G417500.1	Wheat	cytosol, plastid	72.26	75.37
TraesCS5B01G319900.1	Wheat	cytosol, nucleus, peroxisome	74.25	75.22
OQU84313	Sorghum	mitochondrion	68.14	71.81
TraesCS5B01G320000.1	Wheat	cytosol	73.12	69.37
EER88676	Sorghum	mitochondrion, plastid	68.85	68.46
EER93519	Sorghum	mitochondrion	66.86	67.82
PGSC0003DMT400094367	Potato	cytosol	8.96	59.43
CDX86854	Canola	cytosol	24.04	58.28
CDX99560	Canola	cytosol	10.81	55.88
VIT_05s0049g00640.t01	Wine grape	cytosol	6.4	55.56
CDX69659	Canola	cytosol	21.76	55.43
CDY60899	Canola	cytosol	23.9	55.08
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	47.94	54.44
TraesCS6B01G176900.1	Wheat	cytosol, nucleus, peroxisome, plastid	48.79	52.93
TraesCS7B01G410500.1	Wheat	mitochondrion, plastid	46.8	52.39
TraesCS7B01G410900.1	Wheat	cytosol, nucleus, plastid	34.57	52.03
Solyc09g089940.1.1	Tomato	cytosol	47.08	51.96
PGSC0003DMT400044378	Potato	cytosol	46.66	51.49
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.11	51.02
Solyc01g009530.1.1	Tomato	cytosol	15.51	50.93
PGSC0003DMT400070342	Potato	cytosol	28.73	50.88
TraesCS6B01G177100.1	Wheat	cytosol	45.66	50.71
CDY09774	Canola	cytosol, plastid	46.8	50.69
PGSC0003DMT400030584	Potato	cytosol, plastid	43.53	50.0
Bra035287.1-P	Field mustard	cytosol	41.96	49.75
Bra008847.1-P	Field mustard	nucleus, plastid	47.08	49.7
Zm00001d045614_P001	Maize	mitochondrion	6.4	49.45
KRH75085	Soybean	cytosol, plastid	45.38	49.38
CDY22349	Canola	plastid	42.96	49.35
AT5G13210.1	Thale cress	cytosol, plastid	46.66	48.74
Bra033679.1-P	Field mustard	plastid	44.52	48.6
Solyc01g009540.1.1	Tomato	cytosol	6.54	48.42
VIT_05s0049g00560.t01	Wine grape	cytosol	36.27	48.3
AT5G43390.1	Thale cress	cytosol, plastid	43.39	47.43
AT5G43400.1	Thale cress	plastid	43.95	47.18
TraesCS7B01G410400.1	Wheat	mitochondrion	46.09	46.22
TraesCS5B01G302800.1	Wheat	cytosol, plastid	40.83	45.7
TraesCS3B01G607400.1	Wheat	cytosol	41.82	45.51
VIT_05s0049g00650.t01	Wine grape	cytosol	8.53	45.45
CDX69660	Canola	plastid	21.76	44.48
AT3G24780.1	Thale cress	nucleus	44.1	43.36
CDX99561	Canola	nucleus, plastid	15.65	34.7
CDX86853	Canola	endoplasmic reticulum, extracellular	7.11	26.88

Protein Annotations

EnsemblPlants:TraesCS5B01G302900.1	EnsemblPlantsGene:TraesCS5B01G302900	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
PANTHER:PTHR31373	PANTHER:PTHR31373:SF2	PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	SUPFAM:SSF53300
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:487437635..487440000

Molecular Weight (calculated)

78204.8 Da

IEP (calculated)

8.955

GRAVY (calculated)

-0.305

Length

703 amino acids

Sequence
(BLAST)

001: MATQAEPAAP PRRLLGPPVI RTARPSPASA ADADAAAAAS HPFLDLLDAS FNAPSAAEAK AALRPRRALT ENCSATYANS GNPCLDLFFQ VVPDTPPERV
101: RQLLAAAWAH DALTALKLAC NLRGVRGTGK SDKEGFYAAA LWLHDNHPRT LACNVAALAE FGYLKDFPEL LFRLIHGPDV RKVAREGAAA EKVRRKEKNF
201: AKQREALRAS LAGRKRAREL APVPPKATFG DFLSAALSKS GRKPMEVETV PVSVAVQEPA EQKPEEMEVD QKKKKPRRMS KKVRKVAKLA VQSLETYYGD
301: RAYRFLFEAV ADFFAALLAS DLEQLATGGK KRKIGLAAKW CPTPGSSFDR TTLLCEAIAH RLFPRDSDPE YAQLTDEHYT YRALHRLRRE VLVPLRKVLE
401: LPEVYMSAQR WSELPYTRVA SVAMRRYKFL FKKHDEERFD KYLEDVEAGK AKISAGALLP HEIAASALSG VEDDVSELQW RRMVDDLRSK GALRNCISVC
501: DVSGSMDGTP MHVCIALGVL TSELSEEPWA GKVITFSQRP EIHLIKGKTL REKMSFVETM QWDMNTNFQA VFDQILRTAV EARLAPEKMI RTIFVYSDME
601: FDEASATGGY YARSSSWDTD YEVICKKFRA AGYGDAVPQI IFWNLRDSKS TPVTSTQPGV AMVSGFSKNL LKIFLKNDGV VNPEAVMMEA IAGEEYQKLE
701: VFD

Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)

001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD

Arabidopsis Description

AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.