Factsheet for HORVU5Hr1G079390.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 2
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G309300.1	Wheat	plastid	82.87	64.38
TraesCS5B01G302900.1	Wheat	plastid	82.87	64.01
TraesCS5A01G302600.1	Wheat	plastid	82.5	63.91
HORVU6Hr1G013080.3	Barley	nucleus, peroxisome	76.24	58.81
VIT_05s0049g00640.t01	Wine grape	cytosol	8.47	56.79
OQU84313	Sorghum	mitochondrion	61.88	50.37
EER93519	Sorghum	mitochondrion	61.14	47.91
EER88676	Sorghum	mitochondrion, plastid	61.69	47.38
Solyc01g009530.1.1	Tomato	cytosol	17.5	44.39
HORVU5Hr1G081560.3	Barley	nucleus	57.46	44.38
Zm00001d045614_P001	Maize	mitochondrion	7.18	42.86
CDX69660	Canola	plastid	27.07	42.73
HORVU3Hr1G117270.1	Barley	cytosol	22.84	38.04
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	42.73	37.48
Solyc09g089940.1.1	Tomato	cytosol	43.46	37.05
PGSC0003DMT400044378	Potato	cytosol	42.91	36.58
HORVU6Hr1G029540.1	Barley	cytosol, nucleus, peroxisome	42.73	35.53
PGSC0003DMT400030584	Potato	cytosol, plastid	39.96	35.46
CDY22349	Canola	plastid	39.78	35.29
KRH75085	Soybean	cytosol, plastid	41.99	35.29
CDY09774	Canola	cytosol, plastid	41.99	35.13
HORVU7Hr1G112970.1	Barley	cytosol, nucleus	41.07	34.63
Bra033679.1-P	Field mustard	plastid	40.52	34.16
CDX99561	Canola	nucleus, plastid	19.89	34.07
HORVU5Hr1G079400.3	Barley	cytosol, nucleus, plastid	39.04	33.92
VIT_05s0049g00560.t01	Wine grape	cytosol	32.78	33.71
Bra008847.1-P	Field mustard	nucleus, plastid	41.25	33.63
AT5G13210.1	Thale cress	cytosol, plastid	41.62	33.58
PGSC0003DMT400070342	Potato	cytosol	24.49	33.5
Bra035287.1-P	Field mustard	cytosol	35.73	32.72
AT5G43400.1	Thale cress	plastid	39.23	32.52
AT5G43390.1	Thale cress	cytosol, plastid	38.49	32.5
AT3G24780.1	Thale cress	nucleus	40.7	30.91
HORVU7Hr1G112960.3	Barley	nucleus	29.1	25.52
CDX86853	Canola	endoplasmic reticulum, extracellular	8.66	25.27
CDX86854	Canola	cytosol	13.44	25.17
CDY60899	Canola	cytosol	14.0	24.92
CDX69659	Canola	cytosol	10.31	20.29
PGSC0003DMT400030583	Potato	cytosol, vacuole	1.84	10.2
VIT_05s0049g00650.t01	Wine grape	cytosol	1.47	6.06
Os09t0499500-01	Rice	cytosol	0.74	3.01
Solyc01g009540.1.1	Tomato	cytosol	0.37	2.11
PGSC0003DMT400094367	Potato	cytosol	0.18	0.94
CDX99560	Canola	cytosol	0.18	0.74

Protein Annotations

EnsemblPlants:HORVU5Hr1G079390.2	EnsemblPlantsGene:HORVU5Hr1G079390	InterPro:DUF2828	InterPro:UCP015417_vWA	PANTHER:PTHR31373	PANTHER:PTHR31373:SF2
PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	UniParc:UPI000B4781BF	UniProt:A0A287RY40	MapMan:35.2

Description

No Description!

Coordinates

chrchr5H:-:556780083..556782505

Molecular Weight (calculated)

60353.4 Da

IEP (calculated)

9.347

GRAVY (calculated)

-0.340

Length

543 amino acids

Sequence
(BLAST)

001: MATQTEPAAP PRRLLGPPII RAARPSTDSV GVLNAAAPTS HPFIDILDAA FNAPSAAEMK AAFKPWRAFT ENCFATYANS GNPCLDLFFQ VVPSTPPERV
101: RTLLAAAWAQ DPLTALKLAC NLRGVRGTGK SDKEGFYVAA LWLHDNHPRT LACNVAALAE FGYLKDFPEL LFRLIHGPDV RKVAREGAAA EKVRRKEKDF
201: GKQREALRAS LASRKRAREL APVPPKATFG DFLSAALSKS GRAKPMEVDT VPLAVAVQEP AEQKPDEMEV DQKKKKPRQM SKKVSKVAKL AVQSLETYYG
301: DSAYRFLFEA AADFFAALLA SDLEQLATGG RKMNIGLAAK WCPTPGSSFD RTTLLCEAIA RRLFPRDSDP EYAELTDEHY TYRTLHRLRR EVLVPLRKVL
401: ELPEVYMSAQ RWSELPYTRV ASVAMRRYKF LFKKHDEERF DKYLEDVEAG KAKISAGALL PHEIAASAYR VEDDDVSELQ WRRMVDDLRS KGALRNCISV
501: CDVSGSMEGT PMEVCIALGV LTSEFRAQRG ALGRQGDHLQ RHA

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.