Factsheet for HORVU7Hr1G112960.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G490400.1	Wheat	mitochondrion	64.3	57.1
TraesCS7A01G503000.1	Wheat	mitochondrion	63.0	56.85
TraesCS7B01G410400.1	Wheat	mitochondrion	63.49	56.06
HORVU7Hr1G112970.1	Barley	cytosol, nucleus	56.87	54.66
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.75	48.98
EER88742	Sorghum	plastid	51.86	48.49
Os06t0652100-00	Rice	mitochondrion	50.08	48.36
CDX86854	Canola	cytosol	22.62	48.28
VIT_05s0049g00640.t01	Wine grape	cytosol	6.3	48.15
CDX69659	Canola	cytosol	21.16	47.46
CDY60899	Canola	cytosol	22.62	45.9
HORVU6Hr1G029540.1	Barley	cytosol, nucleus, peroxisome	47.01	44.56
PGSC0003DMT400070342	Potato	cytosol	26.66	41.56
CDX99560	Canola	cytosol	9.05	41.18
PGSC0003DMT400094367	Potato	cytosol	6.46	37.74
Solyc09g089940.1.1	Tomato	cytosol	38.77	37.68
GSMUA_AchrUn_...	Banana	cytosol, plastid	36.19	37.52
KRH75085	Soybean	cytosol, plastid	38.93	37.31
PGSC0003DMT400044378	Potato	cytosol	38.29	37.21
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	36.03	36.03
CDY09774	Canola	cytosol, plastid	37.64	35.9
CDY22349	Canola	plastid	35.38	35.78
Bra008847.1-P	Field mustard	nucleus, plastid	38.29	35.59
PGSC0003DMT400030584	Potato	cytosol, plastid	34.9	35.29
AT5G43390.1	Thale cress	cytosol, plastid	36.19	34.84
VIT_05s0049g00560.t01	Wine grape	cytosol	29.56	34.66
AT5G43400.1	Thale cress	plastid	36.67	34.66
Bra033679.1-P	Field mustard	plastid	36.03	34.63
AT5G13210.1	Thale cress	cytosol, plastid	37.32	34.32
Bra035287.1-P	Field mustard	cytosol	31.66	33.05
AT3G24780.1	Thale cress	nucleus	37.96	32.87
Solyc01g009530.1.1	Tomato	cytosol	11.15	32.24
HORVU6Hr1G013080.3	Barley	nucleus, peroxisome	36.35	31.96
HORVU5Hr1G079400.3	Barley	cytosol, nucleus, plastid	30.37	30.08
Solyc01g009540.1.1	Tomato	cytosol	4.52	29.47
HORVU5Hr1G081560.3	Barley	nucleus	33.44	29.45
HORVU5Hr1G079390.2	Barley	cytosol, nucleus, plastid	25.52	29.1
CDX86853	Canola	endoplasmic reticulum, extracellular	8.72	29.03
VIT_05s0049g00650.t01	Wine grape	cytosol	5.98	28.03
CDX69660	Canola	plastid	14.86	26.74
HORVU3Hr1G117270.1	Barley	cytosol	11.31	21.47
CDX99561	Canola	nucleus, plastid	10.99	21.45

Protein Annotations

EnsemblPlants:HORVU7Hr1G112960.3	EnsemblPlantsGene:HORVU7Hr1G112960	InterPro:DUF2828	InterPro:IPR036465	InterPro:UCP015417_vWA	InterPro:vWFA_dom_sf
ncoils:Coil	PANTHER:PTHR31373	PANTHER:PTHR31373:SF3	PFAM:PF11443	SEG:seg	SUPFAM:SSF53300
UniParc:UPI000B48279F	UniProt:A0A287XUE0	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:636259366..636261222

Molecular Weight (calculated)

54157.1 Da

IEP (calculated)

9.772

GRAVY (calculated)

-0.257

Length

619 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXHGS
101: HPTTLALNAR PVAEFGYLKD LPEILHRIIH GGVSTRAPGK QARLAAEGGG LVAPARAHPA YDRFARFRSG TTRRGRRLAR RNNKRTEKAR VAASQKRDLV
201: EAAQAAVARR KKRADAAATA VQRYARDQNY RLLHEMTAEV FADLLAEDMK KLAAGNMDLS LAGKWCPSVD SCYDRSTLIC EAIARRLFPK GSAPDLPEDL
301: PDAHYAYRVR ERLRKEAYVP LRHALRLPEI FMSAGEWGKV VYTRVSSVAM KNYKEHFAYY DNKRFRRYLA EVKAGNVKIA AGALLPHEIL ASAKFDPEVA
401: NLQWKRMVDD LLALGKLNNC LAVCDVSGSM SGLPMDVCVS LGLLLSELCD EPWRHRVITF SMRPQLHHVA GDTLWDKAQF IQRMDWQMNT DFQAVFDQLL
501: HIAVAGNLAP ESMVKKVFVF SDMEFDQASA SPWETDYEAI TRKYTDAGYA DAIPQIVFWN LRDSRSVPVT SEQKGVALXX XXXXXXXXXX XXXXXXXXXX
601: XXXXXXXXXX XXXXXXXXR

Best Arabidopsis Sequence Match ( AT3G24780.1 )
(BLAST)

001: MASQFPGPSE IQDSNAPLTS SGPTNPVNTS PPMGQTEERP HTYLAALLKN INTCRPSVPK VSNIKKSTKV NVNPVRPVRP VRPIRPVRPV RPVRPVRRRR
101: VDLNKSSPAM GYTENRSATY LSSGNPCLDF FFHIVPSTPK KSLEQRLEEA WDHDSLTTLK LICNLRGVRG TGKSDKEGFY TAALWLHGRH PKTLACNLES
201: LSKFGYFKDF PEILYRILQG PEIRSIQKTQ RYDTIAAASL RRRSRFSRGG RGFGGGRSRG RHFLKRSAAT RELRVANAER KNQEEKARAS LKRKQKKVSM
301: AKAASTKYSN DPNYRFLHER VSELFANQLK RDLEFLTSGQ PNKISLAAKW CPSLDSSFDK ATLICESIAR KIFPQESFPE YEGVEDAHYA YRVRDRLRKQ
401: VLVPLRKTLQ LPEVYMGARA WQSLPYNRVA SVAMKSYKEV FLYRDEKRFQ QYLNDAKTGK TKIAAGAVLP HEIIRELNGG DGGKVAELQW KRMVDDLKEK
501: GSLTNCMAIC DVSGSMNGEP MEVSVALGLL VSELSEEPWK GKLITFRQSP ELHLVKGDDL RSKTEFVESM QWDMNTDFQK VFDLILKVAV ESKLKPQDMI
601: KRVFVFSDME FDEASTSTSS FNKWRSSPPT PSNRWDTLSY SEDDEDEEND AWQTDYKVIV RKYREKGYGE AVPEIVFWNL RDSRSTPVLG NKKGVALVSG
701: FSKKCSWITM ERLIP

Arabidopsis Description

Uncharacterized conserved protein UCP015417, vWA [Source:UniProtKB/TrEMBL;Acc:Q1PEM2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.