Factsheet for GSMUA_AchrUn_randomP22000_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400094367	Potato	cytosol	11.22	63.21
VIT_05s0049g00640.t01	Wine grape	cytosol	7.87	58.02
CDX86854	Canola	cytosol	26.47	54.48
CDX69659	Canola	cytosol	25.13	54.35
CDY60899	Canola	cytosol	27.64	54.1
TraesCS7D01G490500.1	Wheat	cytosol	44.56	53.96
TraesCS7B01G410900.1	Wheat	cytosol, nucleus, plastid	41.88	53.53
Os02t0179600-01	Rice	extracellular	58.46	53.2
TraesCS7B01G410500.1	Wheat	mitochondrion, plastid	55.61	52.87
VIT_01s0146g00440.t01	Wine grape	cytosol, mitochondrion	54.44	52.5
Os06t0652100-00	Rice	mitochondrion	56.28	52.42
TraesCS6D01G138100.1	Wheat	cytosol, nucleus, peroxisome, plastid	55.78	52.28
Solyc01g009540.1.1	Tomato	cytosol	8.21	51.58
EER88742	Sorghum	plastid	57.12	51.51
TraesCS6A01G148700.1	Wheat	cytosol	55.28	51.4
HORVU7Hr1G112970.1	Barley	cytosol, nucleus	55.28	51.24
TraesCS6B01G176900.1	Wheat	cytosol, nucleus, peroxisome, plastid	55.61	51.23
KXG29624	Sorghum	cytosol	56.78	51.21
TraesCS7D01G490900.1	Wheat	mitochondrion	54.94	50.7
HORVU6Hr1G029540.1	Barley	cytosol, nucleus, peroxisome	55.44	50.69
Zm00001d053740_P001	Maize	cytosol	55.44	50.53
Solyc01g009530.1.1	Tomato	cytosol	17.92	50.0
CDY22349	Canola	plastid	51.09	49.84
PGSC0003DMT400044378	Potato	cytosol	53.1	49.76
KRH75085	Soybean	cytosol, plastid	53.77	49.69
PGSC0003DMT400030584	Potato	cytosol, plastid	50.75	49.51
TraesCS6A01G149200.1	Wheat	cytosol	53.43	49.15
Solyc09g089940.1.1	Tomato	cytosol	52.43	49.14
CDY09774	Canola	cytosol, plastid	53.1	48.84
TraesCS6B01G177100.1	Wheat	cytosol	51.42	48.5
PGSC0003DMT400070342	Potato	cytosol	32.16	48.36
Bra033679.1-P	Field mustard	plastid	51.76	47.98
Bra035287.1-P	Field mustard	cytosol	47.57	47.89
Bra008847.1-P	Field mustard	nucleus, plastid	53.27	47.75
VIT_05s0049g00560.t01	Wine grape	cytosol	42.21	47.73
AT5G13210.1	Thale cress	cytosol, plastid	52.43	46.51
VIT_05s0049g00650.t01	Wine grape	cytosol	10.22	46.21
TraesCS7A01G503000.1	Wheat	mitochondrion	53.1	46.21
AT5G43400.1	Thale cress	plastid	50.59	46.11
TraesCS7D01G490400.1	Wheat	mitochondrion	53.43	45.77
TraesCS7B01G410400.1	Wheat	mitochondrion	53.1	45.22
CDX99560	Canola	cytosol	10.22	44.85
AT5G43390.1	Thale cress	cytosol, plastid	47.4	44.01
CDX69660	Canola	plastid	25.29	43.9
PGSC0003DMT400030583	Potato	cytosol, vacuole	7.04	42.86
AT3G24780.1	Thale cress	nucleus	48.74	40.7
TraesCS6D01G138500.1	Wheat	mitochondrion, plastid	22.11	39.17
HORVU7Hr1G112960.3	Barley	nucleus	37.52	36.19
CDX99561	Canola	nucleus, plastid	17.92	33.75
CDX86853	Canola	endoplasmic reticulum, extracellular	8.54	27.42

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP22000_001	EnsemblPlants:GSMUA_AchrUn_randomT22000_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG22000_001	InterPro:DUF2828	InterPro:UCP015417_vWA	PANTHER:PTHR31373
PFAM:PF11443	PIRSF:PIRSF015417	SEG:seg	UniParc:UPI000296284E	UniProt:M0UBA8	MapMan:35.2

Description

Putative Uncharacterized protein L728 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG22000_001]

Coordinates

chrchrUn_random:+:107573809..107575752

Molecular Weight (calculated)

66274.9 Da

IEP (calculated)

9.537

GRAVY (calculated)

-0.308

Length

597 amino acids

Sequence
(BLAST)

001: MTSSPSPATT LLGPPEIRHP PPTSVTAPPP QPPPTPPPTG DPLLDLMDAG FNADPSRPPM GLTENLSPTY ISSGDSCLDF FFQVVPGTAA ETVAELLSAA
101: WAQDAATALK LACHLRGVRG TGKSDRDGFY AAALWLHRHH PKTLALNLLA IADFGYLKDL PEILHRLIAG DNVRAKAKAE RPHRGPQGQR IAADLARGKI
201: LSAQSTEIRR TKRTEMAIRA IKRHTRDPDY RLLYDRVADV FAELLAADLR HLSAGEVAKI SLAAKWCPSI AADLRQVVPL GRKDLPRRCA PRLPPELRSR
301: LPFVSDAHYA YRVRDRLRRA VLVPLRRAID LPEVYMSAGQ WSILPYSRVA SVAMKNYKKH FLKHDRERFT QYLDDVKKGK AKIAAGALLP HEIVKDSGDE
401: VAELQWKRMV EDLSKIGSLR NCIAVCDVSG SMDGTPMEVS VALGLLISEL SEEPWKGRVI TFSERPMLHR IEGESLQEKT RFGRLPADGM VRRVFVFSDM
501: EFDRASPNPW ETDYEAIRRK FEESGYGEAV PEVVFWNLRG TSRSTPVVST QKGVALVSGF SKNMVKLFLE GDGQLSPREV MSSAISGREY EKLVLFD

Best Arabidopsis Sequence Match ( AT5G13210.1 )
(BLAST)

001: MSPSPLLGPP ELRDPNSLLP KPTTTSGPSD PFMDAMVSNF NNSARVNNVN SPPMGYTENK SATYLSSGNP CLDFFFHVVP STPKHSLEQW LQGAWDHDAL
101: TTLKLICNLR GVRGTGKSDK EGFYTAALWL HGRHPKTLAC NLESLSQFGY FKDFPELLYR ILQGSEIRKI QKSERFKRKS EALDRRAPYD GHCYHGRLYG
201: GRGRGSSRPS SKRKPVATRA LRVANAERKN QAEKARASLD RKKKKVSMGK DAFTRYSCDP DYRYLHERVS DLFANQLKKD LEFLTSDKPN EISLAAKWCP
301: SLDSSFDKAT LLCESIARKI FTRESFPEYE GVVEAHYAYR VRDRLRKDVL VPLRKTLQLP EVYMGARNWD ILPYNRVASV AMKSYKEIFL KHDAERFQQY
401: LDDAKAGKTK VAAGAVLPHE IIRELDGGDG GQVAELQWKR TVDDMKEKGS LRNCIAVCDV SGSMNGEPME VCVALGLLVS ELSEEPWKGK LITFSQNPEL
501: HLVKGDDLYS KTEFVKKMQW GMNTDFQKVF DLILGVAVQE KLKPEEMIKR VFVFSDMEFD QAASSSHYSR PGYAFLRQPP SNPSNGWETD YEVIVRKYKQ
601: NGYGDVVPEI VFWNLRDSRA TPVPGNKKGV ALVSGFSKNL MKMFLEHDGE IDPVMMMETA ISKDEYKSLV VVD

Arabidopsis Description

AT5g13210/T31B5_30 [Source:UniProtKB/TrEMBL;Acc:Q9LYV5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.